RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 EVI5LQ96CN4 794 aa20.26■□□□□ 0.83
GABRB3-202ENST00000311550 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
GABRB3-202ENST00000311550 SPATA31E1Q6ZUB1 1445 aa20.25■□□□□ 0.83
GABRB3-202ENST00000311550 NCKAP5LQ9HCH0 1330 aa20.25■□□□□ 0.83
GABRB3-202ENST00000311550 A0A087WZG4 1122 aa20.25■□□□□ 0.83
GABRB3-202ENST00000311550 HSP90B2PQ58FF3 399 aa20.25■□□□□ 0.83
GABRB3-202ENST00000311550 METTL24Q5JXM2 366 aa20.25■□□□□ 0.83
GABRB3-202ENST00000311550 PDIA4P13667 645 aaKnown RBP20.24■□□□□ 0.83
GABRB3-202ENST00000311550 CCT2P78371 535 aaKnown RBP20.24■□□□□ 0.83
GABRB3-202ENST00000311550 CCP110O43303 1012 aa20.24■□□□□ 0.83
GABRB3-202ENST00000311550 ESYT1Q9BSJ8 1104 aa20.24■□□□□ 0.83
GABRB3-202ENST00000311550 GNL3LQ9NVN8 582 aaKnown RBP20.24■□□□□ 0.83
GABRB3-202ENST00000311550 CHPF2Q9P2E5 772 aa20.24■□□□□ 0.83
GABRB3-202ENST00000311550 CDKL5O76039 1030 aa20.24■□□□□ 0.83
GABRB3-202ENST00000311550 CAGE1Q8TC20 777 aa20.24■□□□□ 0.83
GABRB3-202ENST00000311550 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
GABRB3-202ENST00000311550 TXLNAP40222 546 aa20.23■□□□□ 0.83
GABRB3-202ENST00000311550 SAMD9Q5K651 1589 aa20.23■□□□□ 0.83
GABRB3-202ENST00000311550 CEP85Q6P2H3 762 aa20.23■□□□□ 0.83
GABRB3-202ENST00000311550 DCTPP1Q9H773 170 aa20.23■□□□□ 0.83
GABRB3-202ENST00000311550 MTHFSDQ2M296 383 aaKnown RBP20.23■□□□□ 0.83
GABRB3-202ENST00000311550 SLC3A2P08195 630 aaKnown RBP20.22■□□□□ 0.83
GABRB3-202ENST00000311550 NECAB1Q8N987 351 aa20.22■□□□□ 0.83
GABRB3-202ENST00000311550 AIDAQ96BJ3 306 aa20.22■□□□□ 0.83
GABRB3-202ENST00000311550 TCEANC2Q96MN5 208 aa20.22■□□□□ 0.83
GABRB3-202ENST00000311550 PIBF1Q8WXW3 757 aa20.22■□□□□ 0.83
GABRB3-202ENST00000311550 SMARCE1Q969G3 411 aa20.22■□□□□ 0.83
GABRB3-202ENST00000311550 TCEAL9Q9UHQ7 104 aa20.22■□□□□ 0.83
GABRB3-202ENST00000311550 PLEKHM2Q8IWE5 1019 aa20.22■□□□□ 0.83
GABRB3-202ENST00000311550 ZNF518AQ6AHZ1 1483 aa20.22■□□□□ 0.83
GABRB3-202ENST00000311550 UBAC1Q9BSL1 405 aa20.21■□□□□ 0.83
GABRB3-202ENST00000311550 WDR7Q9Y4E6 1490 aa20.21■□□□□ 0.83
GABRB3-202ENST00000311550 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
GABRB3-202ENST00000311550 ADCY5O95622 1261 aa20.21■□□□□ 0.83
GABRB3-202ENST00000311550 UBE3BQ7Z3V4 1068 aa20.21■□□□□ 0.83
GABRB3-202ENST00000311550 PPFIBP1Q86W92 1011 aa20.21■□□□□ 0.83
GABRB3-202ENST00000311550 LRP2BPQ9P2M1 347 aa20.21■□□□□ 0.83
GABRB3-202ENST00000311550 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
GABRB3-202ENST00000311550 ZGPATQ8N5A5 531 aaKnown RBP20.2■□□□□ 0.82
GABRB3-202ENST00000311550 RUFY1Q96T51 708 aa20.2■□□□□ 0.82
GABRB3-202ENST00000311550 ZBTB3Q9H5J0 574 aa20.2■□□□□ 0.82
GABRB3-202ENST00000311550 RAI14Q9P0K7 980 aa20.2■□□□□ 0.82
GABRB3-202ENST00000311550 BLMP54132 1417 aaPredicted RBP20.2■□□□□ 0.82
GABRB3-202ENST00000311550 GOLIM4O00461 696 aa20.2■□□□□ 0.82
GABRB3-202ENST00000311550 ZBTB7BO15156 539 aaPredicted RBP20.2■□□□□ 0.82
GABRB3-202ENST00000311550 ACBD3Q9H3P7 528 aa20.2■□□□□ 0.82
GABRB3-202ENST00000311550 OFD1O75665 1012 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 ATP8B2P98198 1209 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 PUS7Q96PZ0 661 aaKnown RBP20.19■□□□□ 0.82
GABRB3-202ENST00000311550 MAGEC2Q9UBF1 373 aaPredicted RBP20.19■□□□□ 0.82
GABRB3-202ENST00000311550 KDM6BO15054 1643 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 ABCF2Q9UG63 623 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 RAB3GAP1Q15042 981 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 CFAP100Q494V2 611 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 GIMAP6Q6P9H5 292 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 C8orf76Q96K31 380 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 DACH1Q9UI36 760 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 CNPY2Q9Y2B0 182 aa20.19■□□□□ 0.82
GABRB3-202ENST00000311550 EPS15P42566 896 aa20.18■□□□□ 0.82
GABRB3-202ENST00000311550 SNRKQ9NRH2 765 aa20.18■□□□□ 0.82
GABRB3-202ENST00000311550 LRSAM1Q6UWE0 723 aa20.18■□□□□ 0.82
GABRB3-202ENST00000311550 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
GABRB3-202ENST00000311550 EIF4G3O43432 1585 aaKnown RBP20.18■□□□□ 0.82
GABRB3-202ENST00000311550 NPC1L1Q9UHC9 1359 aa20.18■□□□□ 0.82
GABRB3-202ENST00000311550 CBFA2T2O43439 604 aa20.18■□□□□ 0.82
GABRB3-202ENST00000311550 TRIM35Q9UPQ4 493 aa20.18■□□□□ 0.82
GABRB3-202ENST00000311550 AKAP2Q9Y2D5 859 aa20.18■□□□□ 0.82
GABRB3-202ENST00000311550 CLIP2Q9UDT6 1046 aa20.17■□□□□ 0.82
GABRB3-202ENST00000311550 GCC2Q8IWJ2 1684 aa20.17■□□□□ 0.82
GABRB3-202ENST00000311550 ZSCAN22P10073 491 aaPredicted RBP20.17■□□□□ 0.82
GABRB3-202ENST00000311550 UBE2HP62256 183 aa20.17■□□□□ 0.82
GABRB3-202ENST00000311550 IKQ13123 557 aaPredicted RBP20.17■□□□□ 0.82
GABRB3-202ENST00000311550 OTUD7AQ8TE49 926 aaPredicted RBP20.17■□□□□ 0.82
GABRB3-202ENST00000311550 CDK5RAP3Q96JB5 506 aa20.17■□□□□ 0.82
GABRB3-202ENST00000311550 RIMS2Q9UQ26 1411 aa20.17■□□□□ 0.82
GABRB3-202ENST00000311550 PDCL2Q8N4E4 241 aa20.17■□□□□ 0.82
GABRB3-202ENST00000311550 STARD3NLO95772 234 aa20.16■□□□□ 0.82
GABRB3-202ENST00000311550 ANO10Q9NW15 660 aa20.16■□□□□ 0.82
GABRB3-202ENST00000311550 SMTNL1A8MU46 457 aa20.16■□□□□ 0.82
GABRB3-202ENST00000311550 MEX3CQ5U5Q3 659 aaKnown RBP20.16■□□□□ 0.82
GABRB3-202ENST00000311550 ANKRD24Q8TF21 1146 aa20.16■□□□□ 0.82
GABRB3-202ENST00000311550 ABCC10Q5T3U5 1492 aa20.16■□□□□ 0.82
GABRB3-202ENST00000311550 ABCA5Q8WWZ7 1642 aa20.16■□□□□ 0.82
GABRB3-202ENST00000311550 USP48Q86UV5 1035 aa20.16■□□□□ 0.82
GABRB3-202ENST00000311550 RAB11FIP4Q86YS3 637 aa20.16■□□□□ 0.82
GABRB3-202ENST00000311550 CTDP1Q9Y5B0 961 aaPredicted RBP20.16■□□□□ 0.82
GABRB3-202ENST00000311550 ABCC1P33527 1531 aa20.16■□□□□ 0.82
GABRB3-202ENST00000311550 BICDL1Q6ZP65 573 aa20.15■□□□□ 0.82
GABRB3-202ENST00000311550 HMGB1P09429 215 aaKnown RBP20.15■□□□□ 0.82
GABRB3-202ENST00000311550 HAND2P61296 217 aa20.15■□□□□ 0.82
GABRB3-202ENST00000311550 AK7Q96M32 723 aa20.15■□□□□ 0.82
GABRB3-202ENST00000311550 ZNF830Q96NB3 372 aaPredicted RBP20.15■□□□□ 0.82
GABRB3-202ENST00000311550 PA2G4Q9UQ80 394 aaKnown RBP20.15■□□□□ 0.82
GABRB3-202ENST00000311550 TNRQ92752 1358 aa20.15■□□□□ 0.82
GABRB3-202ENST00000311550 MAST1Q9Y2H9 1570 aa20.15■□□□□ 0.82
GABRB3-202ENST00000311550 NPATQ14207 1427 aa20.15■□□□□ 0.82
GABRB3-202ENST00000311550 IFIT5Q13325 482 aaKnown RBP20.15■□□□□ 0.82
GABRB3-202ENST00000311550 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
GABRB3-202ENST00000311550 TMOD3Q9NYL9 352 aa20.15■□□□□ 0.82
GABRB3-202ENST00000311550 NOL7Q9UMY1 257 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms