RNA–Protein interactions for RNA: ENST00000311066.9

PRDM2-202, Transcript of PR/SET domain 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM2, Length 7,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-202ENST00000311066 TTLL12Q14166 644 aaPredicted RBP7.81□□□□□ -1.16
PRDM2-202ENST00000311066 EYA1Q99502 592 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 MAP3K19Q56UN5 1328 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 A0A1W2PP64 1363 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 SIRT1Q96EB6 747 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 NLRP3Q96P20 1036 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 BOLA2Q9H3K6 86 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 SASS6Q6UVJ0 657 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 ZNF396Q96N95 335 aaPredicted RBP7.81□□□□□ -1.16
PRDM2-202ENST00000311066 CCDC8Q9H0W5 538 aaPredicted RBP7.81□□□□□ -1.16
PRDM2-202ENST00000311066 COPS6Q7L5N1 327 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 STK32BQ9NY57 414 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 PAXIP1Q6ZW49 1069 aaPredicted RBP7.81□□□□□ -1.16
PRDM2-202ENST00000311066 TESK2Q96S53 571 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 MKNK2Q9HBH9 465 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 NIP7Q9Y221 180 aaKnown RBP eCLIP7.81□□□□□ -1.16
PRDM2-202ENST00000311066 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
PRDM2-202ENST00000311066 KRT18P05783 430 aaKnown RBP7.8□□□□□ -1.16
PRDM2-202ENST00000311066 LTKP29376 864 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 STK3Q13188 491 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 STK38Q15208 465 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 CHPF2Q9P2E5 772 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 ANKRD18AQ8IVF6 992 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 TARBP1Q13395 1621 aaKnown RBP7.8□□□□□ -1.16
PRDM2-202ENST00000311066 ZFYVE9O95405 1425 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 DZIP3Q86Y13 1208 aaKnown RBP7.8□□□□□ -1.16
PRDM2-202ENST00000311066 NFATC2IPQ8NCF5 419 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 SDF4Q9BRK5 362 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 NAPBQ9H115 298 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 MAST1Q9Y2H9 1570 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 WWC2Q6AWC2 1192 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 JAKMIP1Q96N16 626 aaKnown RBP7.8□□□□□ -1.16
PRDM2-202ENST00000311066 MAPKBP1O60336 1514 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 ASXL1Q8IXJ9 1541 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 JMYQ8N9B5 988 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 NYXQ9GZU5 481 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 PDRG1Q9NUG6 133 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 NOL7Q9UMY1 257 aaKnown RBP7.8□□□□□ -1.16
PRDM2-202ENST00000311066 MINDY4BA8MYZ0 360 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 ALDH1L1O75891 902 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 TPTE2Q6XPS3 522 aa7.8□□□□□ -1.16
PRDM2-202ENST00000311066 UTP14AQ9BVJ6 771 aaKnown RBP7.8□□□□□ -1.16
PRDM2-202ENST00000311066 TRIM27P14373 513 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 SPTY2D1Q68D10 685 aaPredicted RBP7.79□□□□□ -1.16
PRDM2-202ENST00000311066 MAP3K5Q99683 1374 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 EIF2AK4Q9P2K8 1649 aaKnown RBP7.79□□□□□ -1.16
PRDM2-202ENST00000311066 POLR3AO14802 1390 aaPredicted RBP7.79□□□□□ -1.16
PRDM2-202ENST00000311066 SMARCA5O60264 1052 aaPredicted RBP7.79□□□□□ -1.16
PRDM2-202ENST00000311066 ZSCAN31Q96LW9 406 aaPredicted RBP7.79□□□□□ -1.16
PRDM2-202ENST00000311066 USP21Q9UK80 565 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 U3KPZ7 1027 aaPredicted RBP7.79□□□□□ -1.16
PRDM2-202ENST00000311066 TTF1Q15361 905 aaPredicted RBP7.79□□□□□ -1.16
PRDM2-202ENST00000311066 OLFM4Q6UX06 510 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 KSR2Q6VAB6 950 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 MAP7D2Q96T17 732 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 ARHGEF12Q9NZN5 1544 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 UQCRFS1P1P0C7P4 283 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 WASF1Q92558 559 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 CCNL1Q9UK58 526 aaPredicted RBP7.79□□□□□ -1.16
PRDM2-202ENST00000311066 PZPP20742 1482 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 MAGI2Q86UL8 1455 aa7.79□□□□□ -1.16
PRDM2-202ENST00000311066 RNMTO43148 476 aaKnown RBP7.78□□□□□ -1.16
PRDM2-202ENST00000311066 PIK3C2GO75747 1445 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 SBNO1A3KN83 1393 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
PRDM2-202ENST00000311066 MYO1BO43795 1136 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 BAG3O95817 575 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 ZNF444Q8N0Y2 327 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-202ENST00000311066 ZNF592Q92610 1267 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 ECHDC1Q9NTX5 307 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 GNPATO15228 680 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 FAM98CQ17RN3 349 aaKnown RBP7.78□□□□□ -1.16
PRDM2-202ENST00000311066 ARHGAP45Q92619 1136 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 JARID2Q92833 1246 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-202ENST00000311066 RNF41Q9H4P4 317 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-202ENST00000311066 TMEM94Q12767 1356 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 ZNF76P36508 570 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 TRAPPC3LQ5T215 181 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 HSP90AA2PQ14568 343 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-202ENST00000311066 DNAJC5Q9H3Z4 198 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 HDAC9Q9UKV0 1011 aa7.78□□□□□ -1.16
PRDM2-202ENST00000311066 EDC4Q6P2E9 1401 aaKnown RBP7.77□□□□□ -1.16
PRDM2-202ENST00000311066 EPS15P42566 896 aa7.77□□□□□ -1.17
PRDM2-202ENST00000311066 SAMD9Q5K651 1589 aa7.77□□□□□ -1.17
PRDM2-202ENST00000311066 CFAP43Q8NDM7 1665 aa7.77□□□□□ -1.17
PRDM2-202ENST00000311066 PLEKHG3A1L390 1219 aa7.77□□□□□ -1.17
PRDM2-202ENST00000311066 KINO60870 393 aaKnown RBP7.77□□□□□ -1.17
PRDM2-202ENST00000311066 NPHP4O75161 1426 aaPredicted RBP7.77□□□□□ -1.17
PRDM2-202ENST00000311066 GSTO1P78417 241 aa7.77□□□□□ -1.17
PRDM2-202ENST00000311066 NAT10Q9H0A0 1025 aaKnown RBP7.77□□□□□ -1.17
PRDM2-202ENST00000311066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.77□□□□□ -1.17
PRDM2-202ENST00000311066 HLA-DOAP06340 250 aa7.77□□□□□ -1.17
PRDM2-202ENST00000311066 PRPF40BQ6NWY9 871 aaKnown RBP7.77□□□□□ -1.17
PRDM2-202ENST00000311066 DDX17Q92841 729 aaKnown RBP7.77□□□□□ -1.17
PRDM2-202ENST00000311066 CARD14Q9BXL6 1004 aa7.77□□□□□ -1.17
PRDM2-202ENST00000311066 SNRKQ9NRH2 765 aa7.77□□□□□ -1.17
PRDM2-202ENST00000311066 CABP5Q9NP86 173 aa7.77□□□□□ -1.17
PRDM2-202ENST00000311066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.77□□□□□ -1.177e-6■■■■■ 74.5
PRDM2-202ENST00000311066 SEC63Q9UGP8 760 aaKnown RBP7.77□□□□□ -1.17
PRDM2-202ENST00000311066 RANBP6O60518 1105 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms