RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 LAMB4A4D0S4 1761 aa20.74■□□□□ 0.91
SCAND1-201ENST00000305978 PXDNLA1KZ92 1463 aa20.74■□□□□ 0.91
SCAND1-201ENST00000305978 ARFGEF1Q9Y6D6 1849 aa20.74■□□□□ 0.91
SCAND1-201ENST00000305978 RALBP1Q15311 655 aa20.73■□□□□ 0.91
SCAND1-201ENST00000305978 BCORQ6W2J9 1755 aa20.72■□□□□ 0.91
SCAND1-201ENST00000305978 FKBP8Q14318 412 aa20.72■□□□□ 0.91
SCAND1-201ENST00000305978 MCM10Q7L590 875 aa20.72■□□□□ 0.91
SCAND1-201ENST00000305978 RTF1Q92541 710 aaKnown RBP20.72■□□□□ 0.91
SCAND1-201ENST00000305978 BTBD11A6QL63 1104 aa20.71■□□□□ 0.91
SCAND1-201ENST00000305978 HTATSF1O43719 755 aaKnown RBP20.71■□□□□ 0.91
SCAND1-201ENST00000305978 STARD3NLO95772 234 aa20.71■□□□□ 0.91
SCAND1-201ENST00000305978 FMNL2Q96PY5 1086 aa20.71■□□□□ 0.91
SCAND1-201ENST00000305978 PARP3Q9Y6F1 533 aa20.71■□□□□ 0.91
SCAND1-201ENST00000305978 ZPR1O75312 459 aa20.7■□□□□ 0.9
SCAND1-201ENST00000305978 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
SCAND1-201ENST00000305978 DLEC1Q9Y238 1755 aa20.69■□□□□ 0.9
SCAND1-201ENST00000305978 KCNQ3O43525 872 aa20.69■□□□□ 0.9
SCAND1-201ENST00000305978 DDR1Q08345 913 aa20.69■□□□□ 0.9
SCAND1-201ENST00000305978 DCTN1Q14203 1278 aa20.69■□□□□ 0.9
SCAND1-201ENST00000305978 USPL1Q5W0Q7 1092 aa20.69■□□□□ 0.9
SCAND1-201ENST00000305978 ZNF784Q8NCA9 323 aaPredicted RBP20.69■□□□□ 0.9
SCAND1-201ENST00000305978 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
SCAND1-201ENST00000305978 NARFQ9UHQ1 456 aa20.69■□□□□ 0.9
SCAND1-201ENST00000305978 NEFMP07197 916 aa20.68■□□□□ 0.9
SCAND1-201ENST00000305978 CANXP27824 592 aaKnown RBP20.68■□□□□ 0.9
SCAND1-201ENST00000305978 TM4SF1P30408 202 aa20.67■□□□□ 0.9
SCAND1-201ENST00000305978 EIF5P55010 431 aaKnown RBP20.67■□□□□ 0.9
SCAND1-201ENST00000305978 TGFB2P61812 414 aa20.67■□□□□ 0.9
SCAND1-201ENST00000305978 WWC3Q9ULE0 1092 aa20.66■□□□□ 0.9
SCAND1-201ENST00000305978 MYBBP1AQ9BQG0 1328 aaKnown RBP20.66■□□□□ 0.9
SCAND1-201ENST00000305978 ANKRD31Q8N7Z5 1873 aa20.65■□□□□ 0.9
SCAND1-201ENST00000305978 POLRMTO00411 1230 aaKnown RBP20.65■□□□□ 0.9
SCAND1-201ENST00000305978 PNNQ9H307 717 aaKnown RBP20.65■□□□□ 0.9
SCAND1-201ENST00000305978 MAPK8IP3Q9UPT6 1336 aa20.64■□□□□ 0.89
SCAND1-201ENST00000305978 NFE2L2Q16236 605 aa20.64■□□□□ 0.89
SCAND1-201ENST00000305978 BCL2L12Q9HB09 334 aa20.64■□□□□ 0.89
SCAND1-201ENST00000305978 A0A087WZG4 1122 aa20.63■□□□□ 0.89
SCAND1-201ENST00000305978 A0A0G2JLW4 131 aa20.63■□□□□ 0.89
SCAND1-201ENST00000305978 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
SCAND1-201ENST00000305978 A1BGP04217 495 aa20.62■□□□□ 0.89
SCAND1-201ENST00000305978 DPEP1P16444 411 aa20.62■□□□□ 0.89
SCAND1-201ENST00000305978 NFIXQ14938 502 aa20.62■□□□□ 0.89
SCAND1-201ENST00000305978 TAF7Q15545 349 aaPredicted RBP20.62■□□□□ 0.89
SCAND1-201ENST00000305978 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
SCAND1-201ENST00000305978 PRAMEF22A3QJZ6 481 aa20.6■□□□□ 0.89
SCAND1-201ENST00000305978 USP16Q9Y5T5 823 aa20.6■□□□□ 0.89
SCAND1-201ENST00000305978 SBF1O95248 1867 aa20.6■□□□□ 0.89
SCAND1-201ENST00000305978 CACNA1SQ13698 1873 aa20.59■□□□□ 0.89
SCAND1-201ENST00000305978 KCNA3P22001 575 aa20.59■□□□□ 0.89
SCAND1-201ENST00000305978 ZNF330Q9Y3S2 320 aaPredicted RBP20.59■□□□□ 0.89
SCAND1-201ENST00000305978 NUP98P52948 1817 aa20.59■□□□□ 0.89
SCAND1-201ENST00000305978 COL11A2P13942 1736 aaPredicted RBP20.58■□□□□ 0.89
SCAND1-201ENST00000305978 PNISRQ8TF01 805 aaKnown RBP20.58■□□□□ 0.89
SCAND1-201ENST00000305978 MIS18AQ9NYP9 233 aa20.58■□□□□ 0.89
SCAND1-201ENST00000305978 TBC1D2BQ9UPU7 963 aa20.58■□□□□ 0.89
SCAND1-201ENST00000305978 BCS1LQ9Y276 419 aa20.58■□□□□ 0.89
SCAND1-201ENST00000305978 ADCY9O60503 1353 aa20.58■□□□□ 0.88
SCAND1-201ENST00000305978 THUMPD2Q9BTF0 503 aaKnown RBP20.57■□□□□ 0.88
SCAND1-201ENST00000305978 CCDC88AQ3V6T2 1871 aa20.56■□□□□ 0.88
SCAND1-201ENST00000305978 ATP10DQ9P241 1426 aa20.56■□□□□ 0.88
SCAND1-201ENST00000305978 SERPINB2P05120 415 aa20.56■□□□□ 0.88
SCAND1-201ENST00000305978 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
SCAND1-201ENST00000305978 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
SCAND1-201ENST00000305978 CHRNA5P30532 468 aa20.55■□□□□ 0.88
SCAND1-201ENST00000305978 PIP4K2AP48426 406 aaPredicted RBP20.55■□□□□ 0.88
SCAND1-201ENST00000305978 NPM2Q86SE8 214 aaKnown RBP20.55■□□□□ 0.88
SCAND1-201ENST00000305978 PIM2Q9P1W9 311 aa20.55■□□□□ 0.88
SCAND1-201ENST00000305978 CAMTA2O94983 1202 aa20.54■□□□□ 0.88
SCAND1-201ENST00000305978 TBC1D9BQ66K14 1250 aa20.54■□□□□ 0.88
SCAND1-201ENST00000305978 BICDL1Q6ZP65 573 aa20.54■□□□□ 0.88
SCAND1-201ENST00000305978 DZIP3Q86Y13 1208 aaKnown RBP20.54■□□□□ 0.88
SCAND1-201ENST00000305978 CARMIL3Q8ND23 1372 aa20.54■□□□□ 0.88
SCAND1-201ENST00000305978 ARFGEF2Q9Y6D5 1785 aa20.54■□□□□ 0.88
SCAND1-201ENST00000305978 NBPF26B4DH59 902 aa20.53■□□□□ 0.88
SCAND1-201ENST00000305978 RIPK4P57078 832 aa20.53■□□□□ 0.88
SCAND1-201ENST00000305978 NBPF10Q6P3W6 841 aaKnown RBP20.53■□□□□ 0.88
SCAND1-201ENST00000305978 NBPF15Q8N660 670 aa20.53■□□□□ 0.88
SCAND1-201ENST00000305978 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
SCAND1-201ENST00000305978 EIF4A1P60842 406 aaKnown RBP20.52■□□□□ 0.88
SCAND1-201ENST00000305978 DALRD3Q5D0E6 543 aaKnown RBP20.52■□□□□ 0.88
SCAND1-201ENST00000305978 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
SCAND1-201ENST00000305978 WDR43Q15061 677 aaKnown RBP eCLIP20.51■□□□□ 0.87
SCAND1-201ENST00000305978 ARHGAP27Q6ZUM4 889 aa20.5■□□□□ 0.87
SCAND1-201ENST00000305978 CCDC146Q8IYE0 955 aa20.5■□□□□ 0.87
SCAND1-201ENST00000305978 LMOD3Q0VAK6 560 aa20.49■□□□□ 0.87
SCAND1-201ENST00000305978 PRR5LQ6MZQ0 368 aa20.48■□□□□ 0.87
SCAND1-201ENST00000305978 RUNDC1Q96C34 613 aa20.48■□□□□ 0.87
SCAND1-201ENST00000305978 SETDB2Q96T68 719 aa20.48■□□□□ 0.87
SCAND1-201ENST00000305978 ADAMTS8Q9UP79 889 aa20.48■□□□□ 0.87
SCAND1-201ENST00000305978 RRP7AQ9Y3A4 280 aaKnown RBP20.48■□□□□ 0.87
SCAND1-201ENST00000305978 FER1L6Q2WGJ9 1857 aa20.47■□□□□ 0.87
SCAND1-201ENST00000305978 CLEC4GQ6UXB4 293 aa20.47■□□□□ 0.87
SCAND1-201ENST00000305978 TSPYL4Q9UJ04 414 aa20.47■□□□□ 0.87
SCAND1-201ENST00000305978 ZNF652Q9Y2D9 606 aa20.47■□□□□ 0.87
SCAND1-201ENST00000305978 DICER1Q9UPY3 1922 aaKnown RBP20.47■□□□□ 0.87
SCAND1-201ENST00000305978 ANKRD36CQ5JPF3 1778 aa20.46■□□□□ 0.87
SCAND1-201ENST00000305978 RGL2O15211 777 aa20.46■□□□□ 0.87
SCAND1-201ENST00000305978 C2CD5Q86YS7 1000 aa20.46■□□□□ 0.87
SCAND1-201ENST00000305978 BABAM1Q9NWV8 329 aa20.46■□□□□ 0.87
SCAND1-201ENST00000305978 SLX4Q8IY92 1834 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms