RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 THUMPD2Q9BTF0 503 aaKnown RBP22.18■■□□□ 1.14
NDUFA3-201ENST00000303553 BABAM1Q9NWV8 329 aa22.18■■□□□ 1.14
NDUFA3-201ENST00000303553 KCNQ3O43525 872 aa22.17■■□□□ 1.14
NDUFA3-201ENST00000303553 SNRPA1P09661 255 aaKnown RBP22.17■■□□□ 1.14
NDUFA3-201ENST00000303553 ARHGEF1Q92888 912 aaKnown RBP22.17■■□□□ 1.14
NDUFA3-201ENST00000303553 SOS1Q07889 1333 aaPredicted RBP22.16■■□□□ 1.14
NDUFA3-201ENST00000303553 MSL1Q68DK7 614 aa22.16■■□□□ 1.14
NDUFA3-201ENST00000303553 COL15A1P39059 1388 aa22.15■■□□□ 1.14
NDUFA3-201ENST00000303553 SMIM5Q71RC9 77 aa22.15■■□□□ 1.14
NDUFA3-201ENST00000303553 NPM2Q86SE8 214 aaKnown RBP22.15■■□□□ 1.14
NDUFA3-201ENST00000303553 ZBTB1Q9Y2K1 713 aa22.15■■□□□ 1.14
NDUFA3-201ENST00000303553 APAF1O14727 1248 aa22.14■■□□□ 1.13
NDUFA3-201ENST00000303553 CALD1Q05682 793 aaKnown RBP22.14■■□□□ 1.13
NDUFA3-201ENST00000303553 NLGN1Q8N2Q7 840 aa22.14■■□□□ 1.13
NDUFA3-201ENST00000303553 TSPYL4Q9UJ04 414 aa22.14■■□□□ 1.13
NDUFA3-201ENST00000303553 USP42Q9H9J4 1324 aaKnown RBP22.13■■□□□ 1.13
NDUFA3-201ENST00000303553 MIS18AQ9NYP9 233 aa22.13■■□□□ 1.13
NDUFA3-201ENST00000303553 TRIM35Q9UPQ4 493 aa22.13■■□□□ 1.13
NDUFA3-201ENST00000303553 A0A087WZG4 1122 aa22.12■■□□□ 1.13
NDUFA3-201ENST00000303553 ZPR1O75312 459 aa22.12■■□□□ 1.13
NDUFA3-201ENST00000303553 CANXP27824 592 aaKnown RBP22.12■■□□□ 1.13
NDUFA3-201ENST00000303553 FHDC1Q9C0D6 1143 aaPredicted RBP22.12■■□□□ 1.13
NDUFA3-201ENST00000303553 IL6STP40189 918 aaPredicted RBP22.11■■□□□ 1.13
NDUFA3-201ENST00000303553 EIF4A1P60842 406 aaKnown RBP22.1■■□□□ 1.13
NDUFA3-201ENST00000303553 GYS1P13807 737 aa22.09■■□□□ 1.13
NDUFA3-201ENST00000303553 USP16Q9Y5T5 823 aa22.09■■□□□ 1.13
NDUFA3-201ENST00000303553 SCN7AQ01118 1682 aa22.08■■□□□ 1.13
NDUFA3-201ENST00000303553 DCAF8L1A6NGE4 600 aa22.08■■□□□ 1.13
NDUFA3-201ENST00000303553 GIGYF1O75420 1035 aaPredicted RBP22.08■■□□□ 1.13
NDUFA3-201ENST00000303553 EIF5P55010 431 aaKnown RBP22.08■■□□□ 1.13
NDUFA3-201ENST00000303553 KLHL34Q8N239 644 aa22.08■■□□□ 1.13
NDUFA3-201ENST00000303553 SYT17Q9BSW7 474 aa22.08■■□□□ 1.13
NDUFA3-201ENST00000303553 NARFQ9UHQ1 456 aa22.08■■□□□ 1.13
NDUFA3-201ENST00000303553 MMP10P09238 476 aa22.07■■□□□ 1.12
NDUFA3-201ENST00000303553 NCBP3Q53F19 620 aaKnown RBP22.07■■□□□ 1.12
NDUFA3-201ENST00000303553 ZNF330Q9Y3S2 320 aaPredicted RBP22.07■■□□□ 1.12
NDUFA3-201ENST00000303553 PRAMEF22A3QJZ6 481 aa22.06■■□□□ 1.12
NDUFA3-201ENST00000303553 CHL1O00533 1208 aa22.06■■□□□ 1.12
NDUFA3-201ENST00000303553 A1BGP04217 495 aa22.06■■□□□ 1.12
NDUFA3-201ENST00000303553 CFAP44Q96MT7 982 aa22.06■■□□□ 1.12
NDUFA3-201ENST00000303553 SRP68Q9UHB9 627 aaKnown RBP22.06■■□□□ 1.12
NDUFA3-201ENST00000303553 LAS1LQ9Y4W2 734 aaKnown RBP22.06■■□□□ 1.12
NDUFA3-201ENST00000303553 CCDC27Q2M243 656 aa22.05■■□□□ 1.12
NDUFA3-201ENST00000303553 USPL1Q5W0Q7 1092 aa22.05■■□□□ 1.12
NDUFA3-201ENST00000303553 CD2APQ9Y5K6 639 aa22.05■■□□□ 1.12
NDUFA3-201ENST00000303553 BCORQ6W2J9 1755 aa22.04■■□□□ 1.12
NDUFA3-201ENST00000303553 GNAI1P63096 354 aa22.04■■□□□ 1.12
NDUFA3-201ENST00000303553 FAM9BQ8IZU0 186 aa22.04■■□□□ 1.12
NDUFA3-201ENST00000303553 IFT57Q9NWB7 429 aa22.04■■□□□ 1.12
NDUFA3-201ENST00000303553 PARP3Q9Y6F1 533 aa22.04■■□□□ 1.12
NDUFA3-201ENST00000303553 ERBB4Q15303 1308 aa22.04■■□□□ 1.12
NDUFA3-201ENST00000303553 FKBP8Q14318 412 aa22.02■■□□□ 1.12
NDUFA3-201ENST00000303553 KIF13BQ9NQT8 1826 aa22.01■■□□□ 1.11
NDUFA3-201ENST00000303553 NGEFQ8N5V2 710 aa22.01■■□□□ 1.11
NDUFA3-201ENST00000303553 CCER2I3L3R5 266 aa22■■□□□ 1.11
NDUFA3-201ENST00000303553 HOXB7P09629 217 aa22■■□□□ 1.11
NDUFA3-201ENST00000303553 DZIP3Q86Y13 1208 aaKnown RBP22■■□□□ 1.11
NDUFA3-201ENST00000303553 RGL2O15211 777 aa21.99■■□□□ 1.11
NDUFA3-201ENST00000303553 TBC1D2BQ9UPU7 963 aa21.99■■□□□ 1.11
NDUFA3-201ENST00000303553 ZNF652Q9Y2D9 606 aa21.99■■□□□ 1.11
NDUFA3-201ENST00000303553 NBPF26B4DH59 902 aa21.98■■□□□ 1.11
NDUFA3-201ENST00000303553 ZNF853P0CG23 659 aa21.98■■□□□ 1.11
NDUFA3-201ENST00000303553 PIP4K2AP48426 406 aaPredicted RBP21.98■■□□□ 1.11
NDUFA3-201ENST00000303553 NBPF10Q6P3W6 841 aaKnown RBP21.98■■□□□ 1.11
NDUFA3-201ENST00000303553 NBPF15Q8N660 670 aa21.98■■□□□ 1.11
NDUFA3-201ENST00000303553 MBIPQ9NS73 344 aa21.98■■□□□ 1.11
NDUFA3-201ENST00000303553 C10orf71Q711Q0 1435 aa21.97■■□□□ 1.11
NDUFA3-201ENST00000303553 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
NDUFA3-201ENST00000303553 WWC1Q8IX03 1113 aa21.97■■□□□ 1.11
NDUFA3-201ENST00000303553 TM4SF1P30408 202 aa21.96■■□□□ 1.11
NDUFA3-201ENST00000303553 BCL2L12Q9HB09 334 aa21.96■■□□□ 1.11
NDUFA3-201ENST00000303553 IL16Q14005 1332 aa21.96■■□□□ 1.11
NDUFA3-201ENST00000303553 NRXN2Q9P2S2 1712 aa21.95■■□□□ 1.1
NDUFA3-201ENST00000303553 AFDNP55196 1824 aaKnown RBP21.95■■□□□ 1.1
NDUFA3-201ENST00000303553 POLRMTO00411 1230 aaKnown RBP21.95■■□□□ 1.1
NDUFA3-201ENST00000303553 CAMTA2O94983 1202 aa21.95■■□□□ 1.1
NDUFA3-201ENST00000303553 EIF2S2P20042 333 aaKnown RBP21.95■■□□□ 1.1
NDUFA3-201ENST00000303553 NFIXQ14938 502 aa21.95■■□□□ 1.1
NDUFA3-201ENST00000303553 CLEC4GQ6UXB4 293 aa21.95■■□□□ 1.1
NDUFA3-201ENST00000303553 NLGN2Q8NFZ4 835 aa21.95■■□□□ 1.1
NDUFA3-201ENST00000303553 CHMP4AQ9BY43 222 aa21.95■■□□□ 1.1
NDUFA3-201ENST00000303553 DDR1Q08345 913 aa21.94■■□□□ 1.1
NDUFA3-201ENST00000303553 KIF6Q6ZMV9 814 aa21.94■■□□□ 1.1
NDUFA3-201ENST00000303553 CARMIL3Q8ND23 1372 aa21.94■■□□□ 1.1
NDUFA3-201ENST00000303553 MYL6BP14649 208 aa21.93■■□□□ 1.1
NDUFA3-201ENST00000303553 TGFB2P61812 414 aa21.92■■□□□ 1.1
NDUFA3-201ENST00000303553 HDGFL1Q5TGJ6 251 aa21.92■■□□□ 1.1
NDUFA3-201ENST00000303553 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
NDUFA3-201ENST00000303553 DUSP27Q5VZP5 1158 aa21.91■■□□□ 1.1
NDUFA3-201ENST00000303553 TBC1D9BQ66K14 1250 aa21.91■■□□□ 1.1
NDUFA3-201ENST00000303553 BICDL1Q6ZP65 573 aa21.91■■□□□ 1.1
NDUFA3-201ENST00000303553 SETDB2Q96T68 719 aa21.91■■□□□ 1.1
NDUFA3-201ENST00000303553 KIAA1551Q9HCM1 1747 aa21.9■■□□□ 1.1
NDUFA3-201ENST00000303553 ERVV-1B6SEH8 477 aa21.9■■□□□ 1.1
NDUFA3-201ENST00000303553 SERPINB2P05120 415 aa21.9■■□□□ 1.1
NDUFA3-201ENST00000303553 GPR162Q16538 588 aa21.9■■□□□ 1.1
NDUFA3-201ENST00000303553 KRT24Q2M2I5 525 aa21.9■■□□□ 1.1
NDUFA3-201ENST00000303553 PXDNLA1KZ92 1463 aa21.9■■□□□ 1.1
NDUFA3-201ENST00000303553 NUP98P52948 1817 aa21.9■■□□□ 1.1
NDUFA3-201ENST00000303553 MAP3K15Q6ZN16 1313 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms