RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 ANKRD7Q92527 254 aa22.56■■□□□ 1.2
TRABD-201ENST00000303434 DNAJC2Q99543 621 aaKnown RBP22.56■■□□□ 1.2
TRABD-201ENST00000303434 KCNA6P17658 529 aa22.56■■□□□ 1.2
TRABD-201ENST00000303434 CCT4P50991 539 aaKnown RBP22.56■■□□□ 1.2
TRABD-201ENST00000303434 NUTM2GQ5VZR2 741 aa22.56■■□□□ 1.2
TRABD-201ENST00000303434 OGFRQ9NZT2 677 aa22.56■■□□□ 1.2
TRABD-201ENST00000303434 ANKARQ7Z5J8 1434 aa22.55■■□□□ 1.2
TRABD-201ENST00000303434 APBB1O00213 710 aa22.55■■□□□ 1.2
TRABD-201ENST00000303434 HOXC9P31274 260 aa22.55■■□□□ 1.2
TRABD-201ENST00000303434 CYP2E1P05181 493 aaPredicted RBP22.54■■□□□ 1.2
TRABD-201ENST00000303434 GNAT3A8MTJ3 354 aa22.54■■□□□ 1.2
TRABD-201ENST00000303434 IGSF3O75054 1194 aa22.54■■□□□ 1.2
TRABD-201ENST00000303434 HMMRO75330 724 aa22.53■■□□□ 1.2
TRABD-201ENST00000303434 U2AF2P26368 475 aaKnown RBP eCLIP22.53■■□□□ 1.22e-8■□□□□ 8.7
TRABD-201ENST00000303434 FKBP5Q13451 457 aaPredicted RBP22.53■■□□□ 1.2
TRABD-201ENST00000303434 GPT2Q8TD30 523 aa22.53■■□□□ 1.2
TRABD-201ENST00000303434 STK31Q9BXU1 1019 aa22.53■■□□□ 1.2
TRABD-201ENST00000303434 SPTLC3Q9NUV7 552 aa22.53■■□□□ 1.2
TRABD-201ENST00000303434 CCDC66A2RUB6 948 aa22.52■■□□□ 1.2
TRABD-201ENST00000303434 ABTB2Q8N961 1025 aa22.52■■□□□ 1.2
TRABD-201ENST00000303434 MARF1Q9Y4F3 1742 aaKnown RBP22.52■■□□□ 1.2
TRABD-201ENST00000303434 SDSP20132 328 aa22.52■■□□□ 1.2
TRABD-201ENST00000303434 KCNJ4P48050 445 aa22.52■■□□□ 1.2
TRABD-201ENST00000303434 RBM27Q9P2N5 1060 aaKnown RBP22.52■■□□□ 1.2
TRABD-201ENST00000303434 SYCE3A1L190 88 aa22.51■■□□□ 1.19
TRABD-201ENST00000303434 USP26Q9BXU7 913 aa22.51■■□□□ 1.19
TRABD-201ENST00000303434 PRPF40AO75400 957 aaKnown RBP22.5■■□□□ 1.19
TRABD-201ENST00000303434 FAM177BA6PVY3 158 aa22.49■■□□□ 1.19
TRABD-201ENST00000303434 CCDC30Q5VVM6 783 aa22.49■■□□□ 1.19
TRABD-201ENST00000303434 DIAPH3Q9NSV4 1193 aa22.49■■□□□ 1.19
TRABD-201ENST00000303434 TMEM63CQ9P1W3 806 aa22.49■■□□□ 1.19
TRABD-201ENST00000303434 LRRC37A3O60309 1634 aa22.49■■□□□ 1.19
TRABD-201ENST00000303434 NWD1Q149M9 1564 aa22.49■■□□□ 1.19
TRABD-201ENST00000303434 GNAI2P04899 355 aa22.49■■□□□ 1.19
TRABD-201ENST00000303434 IL17REQ8NFR9 667 aa22.49■■□□□ 1.19
TRABD-201ENST00000303434 FLIIQ13045 1269 aa22.48■■□□□ 1.19
TRABD-201ENST00000303434 LTV1Q96GA3 475 aaPredicted RBP22.48■■□□□ 1.19
TRABD-201ENST00000303434 CACNA1FO60840 1977 aa22.47■■□□□ 1.19
TRABD-201ENST00000303434 RABEP1Q15276 862 aa22.47■■□□□ 1.19
TRABD-201ENST00000303434 USP54Q70EL1 1684 aa22.47■■□□□ 1.19
TRABD-201ENST00000303434 ZBTB7CA1YPR0 619 aa22.47■■□□□ 1.19
TRABD-201ENST00000303434 CASC1Q6TDU7 716 aa22.47■■□□□ 1.19
TRABD-201ENST00000303434 CTIFO43310 598 aaKnown RBP22.46■■□□□ 1.19
TRABD-201ENST00000303434 TAF7Q15545 349 aaPredicted RBP22.46■■□□□ 1.19
TRABD-201ENST00000303434 NECTIN2Q92692 538 aa22.46■■□□□ 1.19
TRABD-201ENST00000303434 MAP3K5Q99683 1374 aa22.46■■□□□ 1.19
TRABD-201ENST00000303434 SLFN14P0C7P3 912 aa22.46■■□□□ 1.19
TRABD-201ENST00000303434 RNF214Q8ND24 703 aa22.46■■□□□ 1.19
TRABD-201ENST00000303434 TIGD1Q96MW7 591 aa22.46■■□□□ 1.19
TRABD-201ENST00000303434 OSBPL3Q9H4L5 887 aa22.46■■□□□ 1.19
TRABD-201ENST00000303434 CWC22Q9HCG8 908 aaKnown RBP22.46■■□□□ 1.19
TRABD-201ENST00000303434 AK9Q5TCS8 1911 aa22.45■■□□□ 1.19
TRABD-201ENST00000303434 BABAM1Q9NWV8 329 aa22.45■■□□□ 1.18
TRABD-201ENST00000303434 MBD3O95983 291 aa22.45■■□□□ 1.18
TRABD-201ENST00000303434 CHAF1AQ13111 956 aaPredicted RBP22.45■■□□□ 1.18
TRABD-201ENST00000303434 TSPY26PQ9H489 355 aa22.45■■□□□ 1.18
TRABD-201ENST00000303434 FAM208AQ9UK61 1670 aaKnown RBP22.44■■□□□ 1.18
TRABD-201ENST00000303434 GNAI3P08754 354 aa22.44■■□□□ 1.18
TRABD-201ENST00000303434 C14orf37Q86TY3 774 aa22.44■■□□□ 1.18
TRABD-201ENST00000303434 TEX2Q8IWB9 1127 aa22.44■■□□□ 1.18
TRABD-201ENST00000303434 SOS1Q07889 1333 aaPredicted RBP22.44■■□□□ 1.18
TRABD-201ENST00000303434 PDE1AP54750 535 aa22.43■■□□□ 1.18
TRABD-201ENST00000303434 IRX3P78415 501 aaPredicted RBP22.43■■□□□ 1.18
TRABD-201ENST00000303434 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
TRABD-201ENST00000303434 PHF8Q9UPP1 1060 aa22.43■■□□□ 1.18
TRABD-201ENST00000303434 EXOC6BQ9Y2D4 811 aa22.43■■□□□ 1.18
TRABD-201ENST00000303434 UVSSAQ2YD98 709 aa22.42■■□□□ 1.18
TRABD-201ENST00000303434 USHBP1Q8N6Y0 703 aa22.42■■□□□ 1.18
TRABD-201ENST00000303434 ATP8B2P98198 1209 aa22.41■■□□□ 1.18
TRABD-201ENST00000303434 RIOK3O14730 519 aaKnown RBP22.41■■□□□ 1.18
TRABD-201ENST00000303434 REC8O95072 547 aa22.4■■□□□ 1.18
TRABD-201ENST00000303434 CHRM1P11229 460 aaPredicted RBP22.4■■□□□ 1.18
TRABD-201ENST00000303434 SETD1BQ9UPS6 1966 aaKnown RBP22.4■■□□□ 1.18
TRABD-201ENST00000303434 PNMA6EA0A0J9YXQ4 647 aa22.4■■□□□ 1.18
TRABD-201ENST00000303434 TULP2O00295 520 aa22.4■■□□□ 1.18
TRABD-201ENST00000303434 SYCP1Q15431 976 aa22.4■■□□□ 1.18
TRABD-201ENST00000303434 LTN1O94822 1766 aa22.39■■□□□ 1.18
TRABD-201ENST00000303434 ERC2O15083 957 aa22.39■■□□□ 1.17
TRABD-201ENST00000303434 LRRCC1Q9C099 1032 aa22.39■■□□□ 1.17
TRABD-201ENST00000303434 FAM184AQ8NB25 1140 aa22.39■■□□□ 1.17
TRABD-201ENST00000303434 IP6K1Q92551 441 aa22.39■■□□□ 1.17
TRABD-201ENST00000303434 ZFP91Q96JP5 570 aaPredicted RBP22.39■■□□□ 1.17
TRABD-201ENST00000303434 TSPYL1Q9H0U9 437 aa22.39■■□□□ 1.17
TRABD-201ENST00000303434 CTNNA3Q9UI47 895 aa22.39■■□□□ 1.17
TRABD-201ENST00000303434 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
TRABD-201ENST00000303434 PKP1Q13835 747 aa22.37■■□□□ 1.17
TRABD-201ENST00000303434 SALL3Q9BXA9 1300 aa22.37■■□□□ 1.17
TRABD-201ENST00000303434 CALCOCO1Q9P1Z2 691 aa22.37■■□□□ 1.17
TRABD-201ENST00000303434 TERF2Q15554 542 aa22.37■■□□□ 1.17
TRABD-201ENST00000303434 TTC12Q9H892 705 aaPredicted RBP22.37■■□□□ 1.17
TRABD-201ENST00000303434 DDX41Q9UJV9 622 aaKnown RBP22.37■■□□□ 1.17
TRABD-201ENST00000303434 LRRFIP2Q9Y608 721 aaKnown RBP22.37■■□□□ 1.17
TRABD-201ENST00000303434 HDGFL1Q5TGJ6 251 aa22.36■■□□□ 1.17
TRABD-201ENST00000303434 C17orf53Q8N3J3 647 aaPredicted RBP22.36■■□□□ 1.17
TRABD-201ENST00000303434 RBM33Q96EV2 1170 aaKnown RBP22.36■■□□□ 1.17
TRABD-201ENST00000303434 USP44Q9H0E7 712 aa22.36■■□□□ 1.17
TRABD-201ENST00000303434 NSFL1CQ9UNZ2 370 aaKnown RBP22.36■■□□□ 1.17
TRABD-201ENST00000303434 MORC2Q9Y6X9 1032 aaPredicted RBP22.36■■□□□ 1.17
TRABD-201ENST00000303434 NBPF6Q5VWK0 638 aa22.36■■□□□ 1.17
TRABD-201ENST00000303434 SYAP1Q96A49 352 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms