RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 NAA30Q147X3 362 aaPredicted RBP13.05□□□□□ -0.32
ZNF558-201ENST00000301475 TTC14Q96N46 770 aa13.05□□□□□ -0.32
ZNF558-201ENST00000301475 CTNNA3Q9UI47 895 aa13.05□□□□□ -0.32
ZNF558-201ENST00000301475 DNM1Q05193 864 aaKnown RBP13.04□□□□□ -0.32
ZNF558-201ENST00000301475 LRMPQ12912 555 aa13.04□□□□□ -0.32
ZNF558-201ENST00000301475 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
ZNF558-201ENST00000301475 C16orf45Q96MC5 204 aaPredicted RBP13.04□□□□□ -0.32
ZNF558-201ENST00000301475 OGFRQ9NZT2 677 aa13.04□□□□□ -0.32
ZNF558-201ENST00000301475 LARGE1O95461 756 aa13.03□□□□□ -0.32
ZNF558-201ENST00000301475 TPM3P06753 285 aa13.03□□□□□ -0.32
ZNF558-201ENST00000301475 AK2P54819 239 aa13.03□□□□□ -0.32
ZNF558-201ENST00000301475 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
ZNF558-201ENST00000301475 GNAI2P04899 355 aa13.02□□□□□ -0.32
ZNF558-201ENST00000301475 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.32
ZNF558-201ENST00000301475 ZNF771Q7L3S4 317 aaPredicted RBP13.02□□□□□ -0.32
ZNF558-201ENST00000301475 RASEFQ8IZ41 740 aa13.02□□□□□ -0.32
ZNF558-201ENST00000301475 CGNQ9P2M7 1197 aaKnown RBP13.02□□□□□ -0.32
ZNF558-201ENST00000301475 STAP2Q9UGK3 403 aa13.02□□□□□ -0.32
ZNF558-201ENST00000301475 SNX14Q9Y5W7 946 aa13.02□□□□□ -0.32
ZNF558-201ENST00000301475 AATKQ6ZMQ8 1374 aa13.02□□□□□ -0.32
ZNF558-201ENST00000301475 RAD50Q92878 1312 aa13.02□□□□□ -0.33
ZNF558-201ENST00000301475 GOLGA6L6A8MZA4 724 aa13.02□□□□□ -0.33
ZNF558-201ENST00000301475 EDC4Q6P2E9 1401 aaKnown RBP13.01□□□□□ -0.33
ZNF558-201ENST00000301475 CPA1P15085 419 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 MIS18AQ9NYP9 233 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 MTMR6Q9Y217 621 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 TMEM131LA2VDJ0 1609 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 ALKQ9UM73 1620 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 CCDC192P0DO97 292 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 CCT4P50991 539 aaKnown RBP13.01□□□□□ -0.33
ZNF558-201ENST00000301475 CCDC186Q7Z3E2 898 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 LUZP1Q86V48 1076 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 TMEM51Q9NW97 253 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 NRBP1Q9UHY1 535 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 DDX41Q9UJV9 622 aaKnown RBP13.01□□□□□ -0.33
ZNF558-201ENST00000301475 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 CPS1P31327 1500 aa13.01□□□□□ -0.33
ZNF558-201ENST00000301475 SMTNL1A8MU46 457 aa13□□□□□ -0.33
ZNF558-201ENST00000301475 MAP4K4O95819 1239 aaPredicted RBP13□□□□□ -0.33
ZNF558-201ENST00000301475 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
ZNF558-201ENST00000301475 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
ZNF558-201ENST00000301475 ZBTB22O15209 634 aa13□□□□□ -0.33
ZNF558-201ENST00000301475 SLFN14P0C7P3 912 aa13□□□□□ -0.33
ZNF558-201ENST00000301475 SYCP1Q15431 976 aa13□□□□□ -0.33
ZNF558-201ENST00000301475 SULT6B1Q6IMI4 303 aa13□□□□□ -0.33
ZNF558-201ENST00000301475 IL1RAPL2Q9NP60 686 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-201ENST00000301475 ATP6V1DQ9Y5K8 247 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 NRKQ7Z2Y5 1582 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 CRB1P82279 1406 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 GJB2P29033 226 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 GABPB1Q06547 395 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-201ENST00000301475 SGSM2O43147 1006 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 TNNT1P13805 278 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 CCDC83Q8IWF9 413 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 LSG1Q9H089 658 aaKnown RBP12.99□□□□□ -0.33
ZNF558-201ENST00000301475 CHMP3Q9Y3E7 222 aa12.99□□□□□ -0.33
ZNF558-201ENST00000301475 EPB41L2O43491 1005 aaKnown RBP12.98□□□□□ -0.33
ZNF558-201ENST00000301475 LIG1P18858 919 aa12.98□□□□□ -0.33
ZNF558-201ENST00000301475 TYRO3Q06418 890 aa12.98□□□□□ -0.33
ZNF558-201ENST00000301475 ST3GAL1Q11201 340 aa12.98□□□□□ -0.33
ZNF558-201ENST00000301475 CAMK4Q16566 473 aa12.98□□□□□ -0.33
ZNF558-201ENST00000301475 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
ZNF558-201ENST00000301475 BCL11BQ9C0K0 894 aaPredicted RBP12.98□□□□□ -0.33
ZNF558-201ENST00000301475 EIF4A2Q14240 407 aaKnown RBP12.98□□□□□ -0.33
ZNF558-201ENST00000301475 TTC6Q86TZ1 520 aa12.98□□□□□ -0.33
ZNF558-201ENST00000301475 NUTM1Q86Y26 1132 aa12.98□□□□□ -0.33
ZNF558-201ENST00000301475 ATP8B2P98198 1209 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 TAF3Q5VWG9 929 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 KIF18AQ8NI77 898 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 DLC1Q96QB1 1528 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 VPS37CA5D8V6 355 aaPredicted RBP12.97□□□□□ -0.33
ZNF558-201ENST00000301475 MAP3K11Q16584 847 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 COG3Q96JB2 828 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 CBX8Q9HC52 389 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 AOX1Q06278 1338 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 XRN1Q8IZH2 1706 aaKnown RBP12.97□□□□□ -0.33
ZNF558-201ENST00000301475 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 NUP62CLQ9H1M0 184 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 HYPKQ9NX55 129 aa12.97□□□□□ -0.33
ZNF558-201ENST00000301475 LRRFIP2Q9Y608 721 aaKnown RBP12.97□□□□□ -0.33
ZNF558-201ENST00000301475 MORC2Q9Y6X9 1032 aaPredicted RBP12.97□□□□□ -0.33
ZNF558-201ENST00000301475 CASTP20810 708 aaKnown RBP12.96□□□□□ -0.33
ZNF558-201ENST00000301475 ANO6Q4KMQ2 910 aa12.96□□□□□ -0.33
ZNF558-201ENST00000301475 FAM173BQ6P4H8 233 aa12.96□□□□□ -0.33
ZNF558-201ENST00000301475 PLA2G4DQ86XP0 818 aa12.96□□□□□ -0.33
ZNF558-201ENST00000301475 PI4K2BQ8TCG2 481 aa12.96□□□□□ -0.33
ZNF558-201ENST00000301475 ZNF75DP51815 510 aa12.96□□□□□ -0.34
ZNF558-201ENST00000301475 CCDC112Q8NEF3 446 aa12.96□□□□□ -0.34
ZNF558-201ENST00000301475 SPG7Q9UQ90 795 aa12.96□□□□□ -0.34
ZNF558-201ENST00000301475 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
ZNF558-201ENST00000301475 MON2Q7Z3U7 1717 aa12.95□□□□□ -0.34
ZNF558-201ENST00000301475 SOS1Q07889 1333 aaPredicted RBP12.95□□□□□ -0.34
ZNF558-201ENST00000301475 CCDC144BQ3MJ40 725 aa12.95□□□□□ -0.34
ZNF558-201ENST00000301475 DRC7Q8IY82 874 aa12.95□□□□□ -0.34
ZNF558-201ENST00000301475 CCDC144CPQ8IYA2 1237 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms