RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 V9GYY5 206 aaPredicted RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 TNNT1P13805 278 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 RNF168Q8IYW5 571 aaPredicted RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 KIF18AQ8NI77 898 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 PUS7Q96PZ0 661 aaKnown RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 A6NNZ2 444 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 TUBB8Q3ZCM7 444 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 CTNNBL1Q8WYA6 563 aaPredicted RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 ANO10Q9NW15 660 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 TATP17735 454 aaPredicted RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 SMC1AQ14683 1233 aaKnown RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 LARP1Q6PKG0 1096 aaKnown RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 C16orf45Q96MC5 204 aaPredicted RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 GSTTP1A0A1W2PQM5 241 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 WDHD1O75717 1129 aaPredicted RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 TRERF1Q96PN7 1200 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 LRP2BPQ9P2M1 347 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 VPS36Q86VN1 386 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 AIDAQ96BJ3 306 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 USH1CQ9Y6N9 552 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 ANKRD50Q9ULJ7 1429 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 CCDC38Q502W7 563 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 RPGRIP1LQ68CZ1 1315 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 URI1O94763 535 aaPredicted RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 IDH1O75874 414 aaKnown RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 PPM1FP49593 454 aaPredicted RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 TERF1P54274 439 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 NUTM1Q86Y26 1132 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 PPM1EQ8WY54 764 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 ZHX1Q9UKY1 873 aaPredicted RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 DHX29Q7Z478 1369 aaKnown RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 ZNF644Q9H582 1327 aaPredicted RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 MACROD2A1Z1Q3 448 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 SH2D4BQ5SQS7 431 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 IPO4Q8TEX9 1081 aaKnown RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 SCLT1Q96NL6 688 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 RAD54L2Q9Y4B4 1467 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 PPP4R3BQ5MIZ7 849 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 FERMT3Q86UX7 667 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 CTNNA3Q9UI47 895 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 HMGB3O15347 200 aaKnown RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 CHMP4BP1P59074 171 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 KIF3CO14782 793 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 BRD2P25440 801 aaKnown RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 PPP4R3AQ6IN85 833 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 DAPK1P53355 1430 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 TROQ12816 1431 aaPredicted RBP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 CTNNA2P26232 953 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 GTF2F1P35269 517 aaKnown RBP eCLIP6.43□□□□□ -1.38
CPSF2-201ENST00000298875 CCDC150Q8NCX0 1101 aa6.43□□□□□ -1.38
CPSF2-201ENST00000298875 TDRD12Q587J7 1177 aaKnown RBP6.42□□□□□ -1.38
CPSF2-201ENST00000298875 CCDC50Q8IVM0 306 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 SULT6B1Q6IMI4 303 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 DNAAF4Q8WXU2 420 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 PRAM1Q96QH2 718 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 JADE2Q9NQC1 790 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 XPCQ01831 940 aaPredicted RBP6.42□□□□□ -1.38
CPSF2-201ENST00000298875 DNAJC21Q5F1R6 531 aaKnown RBP6.42□□□□□ -1.38
CPSF2-201ENST00000298875 PRPF40BQ6NWY9 871 aaKnown RBP6.42□□□□□ -1.38
CPSF2-201ENST00000298875 MAATS1Q7Z4T9 603 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 KIF4BQ2VIQ3 1234 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 DDX23Q9BUQ8 820 aaKnown RBP6.42□□□□□ -1.38
CPSF2-201ENST00000298875 SPECC1LQ69YQ0 1117 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 SPDYE4A6NLX3 237 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 ZNF710Q8N1W2 664 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 IL1RAPL2Q9NP60 686 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 SERPINA10Q9UK55 444 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 A0A1B0GUA9 196 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 FAM114A2Q9NRY5 505 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 SPG7Q9UQ90 795 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 SMARCC1Q92922 1105 aaPredicted RBP6.42□□□□□ -1.38
CPSF2-201ENST00000298875 TNIP1Q15025 636 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 CKAP2LQ8IYA6 745 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 ALS2CR12Q96Q35 445 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 EPRSP07814 1512 aaKnown RBP6.42□□□□□ -1.38
CPSF2-201ENST00000298875 HLTFQ14527 1009 aaKnown RBP eCLIP6.42□□□□□ -1.38
CPSF2-201ENST00000298875 CPLX3Q8WVH0 158 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 FAM135AQ9P2D6 1515 aa6.42□□□□□ -1.38
CPSF2-201ENST00000298875 KIF14Q15058 1648 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 CASKIN1Q8WXD9 1431 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 TOM1L2Q6ZVM7 507 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 KRT222Q8N1A0 295 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 SMAP1Q8IYB5 467 aaPredicted RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 TRMT1Q9NXH9 659 aaKnown RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 ANKRD18BA2A2Z9 1011 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 CCDC175P0C221 793 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 SSRP1Q08945 709 aaKnown RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 ZNF530Q6P9A1 599 aaPredicted RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 BIVM-ERCC5R4GMW8 1640 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 TAOK3Q9H2K8 898 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 MINDY4BA8MYZ0 360 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 GABPB1Q06547 395 aaPredicted RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 EHBP1Q8NDI1 1231 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 NKTRP30414 1462 aaKnown RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 SMARCA5O60264 1052 aaPredicted RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 SNW1Q13573 536 aaKnown RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 FERMT2Q96AC1 680 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 SRRTQ9BXP5 876 aaKnown RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 GTF2A1P52655 376 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms