RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 WWC2Q6AWC2 1192 aa18.02■□□□□ 0.48
FNDC1-201ENST00000297267 JMYQ8N9B5 988 aa18.02■□□□□ 0.48
FNDC1-201ENST00000297267 NUP88Q99567 741 aaPredicted RBP18.02■□□□□ 0.48
FNDC1-201ENST00000297267 CCDC96Q2M329 555 aa18.02■□□□□ 0.48
FNDC1-201ENST00000297267 PPP4R3BQ5MIZ7 849 aa18.02■□□□□ 0.48
FNDC1-201ENST00000297267 CTNNBL1Q8WYA6 563 aaPredicted RBP18.02■□□□□ 0.47
FNDC1-201ENST00000297267 MACROD2A1Z1Q3 448 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 MBIPQ9NS73 344 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 SERPINA10Q9UK55 444 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 F8W031 263 aaPredicted RBP18.01■□□□□ 0.47
FNDC1-201ENST00000297267 FSIP1Q8NA03 581 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 DACH1Q9UI36 760 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 FCHSD2O94868 740 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 KIAA0754O94854 1291 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 ARHGAP29Q52LW3 1261 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 TICAM2Q86XR7 235 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 C8orf76Q96K31 380 aa18.01■□□□□ 0.47
FNDC1-201ENST00000297267 CBFA2T2O43439 604 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 CC2D2AQ9P2K1 1620 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 PTPN14Q15678 1187 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 KRT24Q2M2I5 525 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 CCP110O43303 1012 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 IGSF3O75054 1194 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 PRKCSHP14314 528 aaPredicted RBP18■□□□□ 0.47
FNDC1-201ENST00000297267 SLC39A6Q13433 755 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 CCDC183Q5T5S1 534 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 KIF1BPQ96EK5 621 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 TRMT112Q9UI30 125 aaKnown RBP18■□□□□ 0.47
FNDC1-201ENST00000297267 SBNO2Q9Y2G9 1366 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 MICU3Q86XE3 530 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 NAPBQ9H115 298 aa18■□□□□ 0.47
FNDC1-201ENST00000297267 DDX46Q7L014 1031 aaKnown RBP17.99■□□□□ 0.47
FNDC1-201ENST00000297267 ATP2C2O75185 946 aa17.99■□□□□ 0.47
FNDC1-201ENST00000297267 ZSCAN23Q3MJ62 389 aa17.99■□□□□ 0.47
FNDC1-201ENST00000297267 CCDC66A2RUB6 948 aa17.99■□□□□ 0.47
FNDC1-201ENST00000297267 WDR78Q5VTH9 848 aa17.99■□□□□ 0.47
FNDC1-201ENST00000297267 GPIHBP1Q8IV16 184 aa17.99■□□□□ 0.47
FNDC1-201ENST00000297267 MYO6Q9UM54 1294 aa17.99■□□□□ 0.47
FNDC1-201ENST00000297267 RXRAP19793 462 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 UIMC1Q96RL1 719 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
FNDC1-201ENST00000297267 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 SLC12A7Q9Y666 1083 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 ZNF213O14771 459 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 DRC1Q96MC2 740 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
FNDC1-201ENST00000297267 IFIT3O14879 490 aaKnown RBP17.98■□□□□ 0.47
FNDC1-201ENST00000297267 ERLIN2O94905 339 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 AFMP43652 599 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 DZIP1Q86YF9 867 aaKnown RBP17.98■□□□□ 0.47
FNDC1-201ENST00000297267 CAMSAP2Q08AD1 1489 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 A0A087WZG4 1122 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 CRACR2BQ8N4Y2 399 aaPredicted RBP17.98■□□□□ 0.47
FNDC1-201ENST00000297267 GOLGA8AA7E2F4 631 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 NLRP5P59047 1200 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 SSRP1Q08945 709 aaKnown RBP17.98■□□□□ 0.47
FNDC1-201ENST00000297267 ZSCAN25Q6NSZ9 544 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
FNDC1-201ENST00000297267 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
FNDC1-201ENST00000297267 UBE4AQ14139 1066 aa17.97■□□□□ 0.47
FNDC1-201ENST00000297267 SLC26A6Q9BXS9 759 aa17.97■□□□□ 0.47
FNDC1-201ENST00000297267 TOP1P11387 765 aaKnown RBP17.97■□□□□ 0.47
FNDC1-201ENST00000297267 NAIPQ13075 1403 aa17.97■□□□□ 0.47
FNDC1-201ENST00000297267 GTF2F1P35269 517 aaKnown RBP eCLIP17.96■□□□□ 0.47
FNDC1-201ENST00000297267 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
FNDC1-201ENST00000297267 AAMPQ13685 434 aa17.96■□□□□ 0.47
FNDC1-201ENST00000297267 KIF4BQ2VIQ3 1234 aa17.96■□□□□ 0.47
FNDC1-201ENST00000297267 SEC24BO95487 1268 aa17.96■□□□□ 0.47
FNDC1-201ENST00000297267 USP8P40818 1118 aa17.96■□□□□ 0.47
FNDC1-201ENST00000297267 ZSCAN31Q96LW9 406 aaPredicted RBP17.96■□□□□ 0.47
FNDC1-201ENST00000297267 FAM107BQ9H098 131 aa17.96■□□□□ 0.47
FNDC1-201ENST00000297267 HCLS1P14317 486 aaPredicted RBP17.96■□□□□ 0.47
FNDC1-201ENST00000297267 PRPF4BQ13523 1007 aaKnown RBP17.95■□□□□ 0.46
FNDC1-201ENST00000297267 RNF187Q5TA31 235 aaPredicted RBP17.95■□□□□ 0.46
FNDC1-201ENST00000297267 HFM1A2PYH4 1435 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 CDKL5O76039 1030 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 ZSCAN30Q86W11 494 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 UBXN4Q92575 508 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 CGNQ9P2M7 1197 aaKnown RBP17.95■□□□□ 0.46
FNDC1-201ENST00000297267 SMTNL1A8MU46 457 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 SCLT1Q96NL6 688 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 MEIS3Q99687 375 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 CHPF2Q9P2E5 772 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 GOLGA6L10A0A0M3HER8 536 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 MARCKSP29966 332 aaPredicted RBP17.95■□□□□ 0.46
FNDC1-201ENST00000297267 PPP1R42Q7Z4L9 355 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 TDRD12Q587J7 1177 aaKnown RBP17.95■□□□□ 0.46
FNDC1-201ENST00000297267 CACNA2D4Q7Z3S7 1137 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 PLIN2Q99541 437 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 HMGN5P82970 282 aaKnown RBP17.95■□□□□ 0.46
FNDC1-201ENST00000297267 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
FNDC1-201ENST00000297267 PLB1Q6P1J6 1458 aa17.94■□□□□ 0.46
FNDC1-201ENST00000297267 ZPR1O75312 459 aa17.94■□□□□ 0.46
FNDC1-201ENST00000297267 PI4KAP2A4QPH2 592 aa17.94■□□□□ 0.46
FNDC1-201ENST00000297267 PI4KAP1Q8N8J0 262 aa17.94■□□□□ 0.46
FNDC1-201ENST00000297267 PCDHB15Q9Y5E8 787 aa17.94■□□□□ 0.46
FNDC1-201ENST00000297267 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
FNDC1-201ENST00000297267 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
FNDC1-201ENST00000297267 CPA1P15085 419 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms