RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 MTHFSDQ2M296 383 aaKnown RBP21.67■■□□□ 1.06
TMEM41A-201ENST00000296254 NRXN2Q9P2S2 1712 aa21.66■■□□□ 1.06
TMEM41A-201ENST00000296254 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
TMEM41A-201ENST00000296254 PER1O15534 1290 aaPredicted RBP21.66■■□□□ 1.06
TMEM41A-201ENST00000296254 DIAPH1O60610 1272 aaKnown RBP21.66■■□□□ 1.06
TMEM41A-201ENST00000296254 ZBTB1Q9Y2K1 713 aa21.66■■□□□ 1.06
TMEM41A-201ENST00000296254 APLP1P51693 650 aa21.65■■□□□ 1.06
TMEM41A-201ENST00000296254 NARFQ9UHQ1 456 aa21.65■■□□□ 1.06
TMEM41A-201ENST00000296254 VSIG10Q8N0Z9 540 aa21.64■■□□□ 1.05
TMEM41A-201ENST00000296254 AFDNP55196 1824 aaKnown RBP21.64■■□□□ 1.05
TMEM41A-201ENST00000296254 NFIXQ14938 502 aa21.63■■□□□ 1.05
TMEM41A-201ENST00000296254 CC2D1BQ5T0F9 858 aaKnown RBP21.63■■□□□ 1.05
TMEM41A-201ENST00000296254 NPC1L1Q9UHC9 1359 aa21.62■■□□□ 1.05
TMEM41A-201ENST00000296254 DLEC1Q9Y238 1755 aa21.62■■□□□ 1.05
TMEM41A-201ENST00000296254 RNF181Q9P0P0 153 aa21.62■■□□□ 1.05
TMEM41A-201ENST00000296254 BCL2L12Q9HB09 334 aa21.61■■□□□ 1.05
TMEM41A-201ENST00000296254 TNRC6CQ9HCJ0 1690 aaKnown RBP21.6■■□□□ 1.05
TMEM41A-201ENST00000296254 RBM46Q8TBY0 533 aaKnown RBP21.6■■□□□ 1.05
TMEM41A-201ENST00000296254 KDM2BQ8NHM5 1336 aa21.59■■□□□ 1.05
TMEM41A-201ENST00000296254 SBF1O95248 1867 aa21.59■■□□□ 1.05
TMEM41A-201ENST00000296254 SCN7AQ01118 1682 aa21.59■■□□□ 1.05
TMEM41A-201ENST00000296254 WDR90Q96KV7 1748 aa21.58■■□□□ 1.05
TMEM41A-201ENST00000296254 TTC5Q8N0Z6 440 aa21.58■■□□□ 1.05
TMEM41A-201ENST00000296254 CARMIL3Q8ND23 1372 aa21.58■■□□□ 1.04
TMEM41A-201ENST00000296254 ZC3H4Q9UPT8 1303 aaKnown RBP21.57■■□□□ 1.04
TMEM41A-201ENST00000296254 SIPA1L3O60292 1781 aaPredicted RBP21.57■■□□□ 1.04
TMEM41A-201ENST00000296254 STARD3NLO95772 234 aa21.57■■□□□ 1.04
TMEM41A-201ENST00000296254 SERPINB2P05120 415 aa21.57■■□□□ 1.04
TMEM41A-201ENST00000296254 C16orf71Q8IYS4 520 aaPredicted RBP21.57■■□□□ 1.04
TMEM41A-201ENST00000296254 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
TMEM41A-201ENST00000296254 EIF5P55010 431 aaKnown RBP21.56■■□□□ 1.04
TMEM41A-201ENST00000296254 RASSF7Q02833 373 aa21.56■■□□□ 1.04
TMEM41A-201ENST00000296254 DNAJC5GQ8N7S2 189 aa21.56■■□□□ 1.04
TMEM41A-201ENST00000296254 GAS2L2Q8NHY3 880 aa21.56■■□□□ 1.04
TMEM41A-201ENST00000296254 ZNF496Q96IT1 587 aaPredicted RBP21.55■■□□□ 1.04
TMEM41A-201ENST00000296254 HEG1Q9ULI3 1381 aa21.55■■□□□ 1.04
TMEM41A-201ENST00000296254 PCNTO95613 3336 aa21.54■■□□□ 1.04
TMEM41A-201ENST00000296254 GNAT3A8MTJ3 354 aa21.54■■□□□ 1.04
TMEM41A-201ENST00000296254 U2SURPO15042 1029 aaKnown RBP21.54■■□□□ 1.04
TMEM41A-201ENST00000296254 TEFQ10587 303 aa21.54■■□□□ 1.04
TMEM41A-201ENST00000296254 FSTL1Q12841 308 aa21.54■■□□□ 1.04
TMEM41A-201ENST00000296254 ZNF790Q6PG37 636 aa21.54■■□□□ 1.04
TMEM41A-201ENST00000296254 IL17REQ8NFR9 667 aa21.54■■□□□ 1.04
TMEM41A-201ENST00000296254 CEMIPQ8WUJ3 1361 aa21.53■■□□□ 1.04
TMEM41A-201ENST00000296254 A0A087WZG4 1122 aa21.53■■□□□ 1.04
TMEM41A-201ENST00000296254 TTLL6Q8N841 843 aa21.53■■□□□ 1.04
TMEM41A-201ENST00000296254 TIAM2Q8IVF5 1701 aa21.52■■□□□ 1.04
TMEM41A-201ENST00000296254 LMNB1P20700 586 aa21.52■■□□□ 1.04
TMEM41A-201ENST00000296254 C2CD5Q86YS7 1000 aa21.52■■□□□ 1.04
TMEM41A-201ENST00000296254 PRELPP51888 382 aa21.51■■□□□ 1.03
TMEM41A-201ENST00000296254 BICDL1Q6ZP65 573 aa21.51■■□□□ 1.03
TMEM41A-201ENST00000296254 TEX13AQ9BXU3 409 aaPredicted RBP21.51■■□□□ 1.03
TMEM41A-201ENST00000296254 RRAGCQ9HB90 399 aa21.51■■□□□ 1.03
TMEM41A-201ENST00000296254 ANKRD31Q8N7Z5 1873 aa21.51■■□□□ 1.03
TMEM41A-201ENST00000296254 COL11A2P13942 1736 aaPredicted RBP21.5■■□□□ 1.03
TMEM41A-201ENST00000296254 H0YIN7 160 aa21.5■■□□□ 1.03
TMEM41A-201ENST00000296254 TBC1D9BQ66K14 1250 aa21.5■■□□□ 1.03
TMEM41A-201ENST00000296254 NFKBIEO00221 500 aa21.49■■□□□ 1.03
TMEM41A-201ENST00000296254 IL6STP40189 918 aaPredicted RBP21.49■■□□□ 1.03
TMEM41A-201ENST00000296254 CNGB1Q14028 1251 aaPredicted RBP21.49■■□□□ 1.03
TMEM41A-201ENST00000296254 FMNL2Q96PY5 1086 aa21.48■■□□□ 1.03
TMEM41A-201ENST00000296254 BCORQ6W2J9 1755 aa21.47■■□□□ 1.03
TMEM41A-201ENST00000296254 HTRA3P83110 453 aa21.47■■□□□ 1.03
TMEM41A-201ENST00000296254 SMC1BQ8NDV3 1235 aa21.47■■□□□ 1.03
TMEM41A-201ENST00000296254 TBC1D2BQ9UPU7 963 aa21.47■■□□□ 1.03
TMEM41A-201ENST00000296254 ZNF330Q9Y3S2 320 aaPredicted RBP21.47■■□□□ 1.03
TMEM41A-201ENST00000296254 GLTPD2A6NH11 291 aa21.46■■□□□ 1.03
TMEM41A-201ENST00000296254 PRKAR2BP31323 418 aa21.46■■□□□ 1.03
TMEM41A-201ENST00000296254 PRR5LQ6MZQ0 368 aa21.46■■□□□ 1.03
TMEM41A-201ENST00000296254 KLRG1Q96E93 195 aa21.46■■□□□ 1.03
TMEM41A-201ENST00000296254 BRIP1Q9BX63 1249 aa21.46■■□□□ 1.03
TMEM41A-201ENST00000296254 RSPH6AQ9H0K4 717 aa21.46■■□□□ 1.03
TMEM41A-201ENST00000296254 PDZRN3Q9UPQ7 1066 aa21.46■■□□□ 1.03
TMEM41A-201ENST00000296254 PHACTR3Q96KR7 559 aa21.45■■□□□ 1.02
TMEM41A-201ENST00000296254 CAMTA2O94983 1202 aa21.44■■□□□ 1.02
TMEM41A-201ENST00000296254 PDE6BP35913 854 aa21.44■■□□□ 1.02
TMEM41A-201ENST00000296254 BTBD11A6QL63 1104 aa21.43■■□□□ 1.02
TMEM41A-201ENST00000296254 KCNQ3O43525 872 aa21.43■■□□□ 1.02
TMEM41A-201ENST00000296254 A1BGP04217 495 aa21.43■■□□□ 1.02
TMEM41A-201ENST00000296254 JMYQ8N9B5 988 aa21.43■■□□□ 1.02
TMEM41A-201ENST00000296254 ZNF622Q969S3 477 aaKnown RBP eCLIP21.43■■□□□ 1.02
TMEM41A-201ENST00000296254 CFAP53Q96M91 514 aa21.43■■□□□ 1.02
TMEM41A-201ENST00000296254 VEGFAP15692 232 aaPredicted RBP21.42■■□□□ 1.02
TMEM41A-201ENST00000296254 FER1L6Q2WGJ9 1857 aa21.42■■□□□ 1.02
TMEM41A-201ENST00000296254 NPM2Q86SE8 214 aaKnown RBP21.42■■□□□ 1.02
TMEM41A-201ENST00000296254 CCDC24Q8N4L8 307 aa21.42■■□□□ 1.02
TMEM41A-201ENST00000296254 CNBD1Q8NA66 436 aa21.42■■□□□ 1.02
TMEM41A-201ENST00000296254 CCDC88AQ3V6T2 1871 aa21.41■■□□□ 1.02
TMEM41A-201ENST00000296254 SETDB2Q96T68 719 aa21.41■■□□□ 1.02
TMEM41A-201ENST00000296254 C21orf2O43822 256 aa21.4■■□□□ 1.02
TMEM41A-201ENST00000296254 DZIP3Q86Y13 1208 aaKnown RBP21.4■■□□□ 1.02
TMEM41A-201ENST00000296254 ARFGEF2Q9Y6D5 1785 aa21.39■■□□□ 1.01
TMEM41A-201ENST00000296254 LTBP3Q9NS15 1303 aa21.39■■□□□ 1.01
TMEM41A-201ENST00000296254 NUDCQ9Y266 331 aa21.39■■□□□ 1.01
TMEM41A-201ENST00000296254 DICER1Q9UPY3 1922 aaKnown RBP21.38■■□□□ 1.01
TMEM41A-201ENST00000296254 ST5P78524 1137 aa21.38■■□□□ 1.01
TMEM41A-201ENST00000296254 NPHP1O15259 732 aa21.37■■□□□ 1.01
TMEM41A-201ENST00000296254 SRGNP10124 158 aa21.37■■□□□ 1.01
TMEM41A-201ENST00000296254 PIP4K2AP48426 406 aaPredicted RBP21.37■■□□□ 1.01
TMEM41A-201ENST00000296254 STYK1Q6J9G0 422 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms