RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 RILPL2Q969X0 211 aa5.93□□□□□ -1.46
PPP1R9A-201ENST00000289495 PXDNLA1KZ92 1463 aa5.93□□□□□ -1.46
PPP1R9A-201ENST00000289495 TNPO1Q92973 898 aaKnown RBP5.93□□□□□ -1.46
PPP1R9A-201ENST00000289495 NUCB2P80303 420 aa5.93□□□□□ -1.46
PPP1R9A-201ENST00000289495 AMOTQ4VCS5 1084 aa5.93□□□□□ -1.46
PPP1R9A-201ENST00000289495 HDAC5Q9UQL6 1122 aa5.93□□□□□ -1.46
PPP1R9A-201ENST00000289495 HOXB7P09629 217 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 ATP8B2P98198 1209 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 LTN1O94822 1766 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 USP54Q70EL1 1684 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 BTBD11A6QL63 1104 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 RAB3GAP1Q15042 981 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 HSP90AB4PQ58FF6 505 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 AKAP4Q5JQC9 854 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 USP26Q9BXU7 913 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 ANO2Q9NQ90 1003 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 NPHP4O75161 1426 aaPredicted RBP5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 XPCQ01831 940 aaPredicted RBP5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 KIF2CQ99661 725 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 CACNA1FO60840 1977 aa5.92□□□□□ -1.46
PPP1R9A-201ENST00000289495 SURF6O75683 361 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 NBPF6Q5VWK0 638 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 DNAAF4Q8WXU2 420 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 NBPF4Q96M43 638 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 OSBPL3Q9H4L5 887 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 ISY1Q9ULR0 285 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 IBTKQ9P2D0 1353 aaPredicted RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 NWD1Q149M9 1564 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 NCAPD2Q15021 1401 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 RAB11FIP3O75154 756 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 CD2BP2O95400 341 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 PROSER2Q86WR7 435 aaPredicted RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 LRRC59Q96AG4 307 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 CHPF2Q9P2E5 772 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 CHD2O14647 1828 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 ZNF142P52746 1687 aaPredicted RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 PNMA6EA0A0J9YXQ4 647 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 TSHZ3Q63HK5 1081 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 MPRIPQ6WCQ1 1025 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 ANKRD24Q8TF21 1146 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 ANP32BQ92688 251 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 GPATCH3Q96I76 525 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 PHAXQ9H814 394 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 IL1RAPL2Q9NP60 686 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 SETD1BQ9UPS6 1966 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 SRGAP3O43295 1099 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 GCP02774 474 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 SSFA2P28290 1259 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 MCM2P49736 904 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 MRE11P49959 708 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 EIF4A1P60842 406 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 KIF1BPQ96EK5 621 aa5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 CWC22Q9HCG8 908 aaKnown RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 C9orf78Q9NZ63 289 aaPredicted RBP5.91□□□□□ -1.46
PPP1R9A-201ENST00000289495 AOX1Q06278 1338 aa5.9□□□□□ -1.46
PPP1R9A-201ENST00000289495 NFAT5O94916 1531 aa5.9□□□□□ -1.46
PPP1R9A-201ENST00000289495 DDX58O95786 925 aaKnown RBP5.9□□□□□ -1.46
PPP1R9A-201ENST00000289495 RAPGEF4Q8WZA2 1011 aa5.9□□□□□ -1.46
PPP1R9A-201ENST00000289495 ESYT1Q9BSJ8 1104 aa5.9□□□□□ -1.46
PPP1R9A-201ENST00000289495 DBF4Q9UBU7 674 aaPredicted RBP5.9□□□□□ -1.46
PPP1R9A-201ENST00000289495 CEMIPQ8WUJ3 1361 aa5.9□□□□□ -1.46
PPP1R9A-201ENST00000289495 PI4KAP2A4QPH2 592 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 CSB-PGBD3P0DP91 1061 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 NCLP19338 710 aaKnown RBP5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 KIAA1211Q6ZU35 1233 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 PPP1R42Q7Z4L9 355 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 PI4KAP1Q8N8J0 262 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 DDX49Q9Y6V7 483 aaKnown RBP5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 MARF1Q9Y4F3 1742 aaKnown RBP5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 C19orf67A6NJJ6 358 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 DDIT3P35638 169 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 NEK4P51957 841 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 CNTROBQ8N137 903 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 USP44Q9H0E7 712 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 LGR6Q9HBX8 967 aa5.9□□□□□ -1.47
PPP1R9A-201ENST00000289495 STK25O00506 426 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 RNMTO43148 476 aaKnown RBP5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 KRT28Q7Z3Y7 464 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 NUTM1Q86Y26 1132 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 ORAI2Q96SN7 254 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 ANXA1P04083 346 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 ATF3P18847 181 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 MCTP1Q6DN14 999 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 NOL8Q76FK4 1167 aaKnown RBP5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 RHPN1Q8TCX5 695 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 SSH3Q8TE77 659 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 ARHGEF25Q86VW2 580 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 ERC1Q8IUD2 1116 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 CLASRPQ8N2M8 674 aaKnown RBP5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 TRIM44Q96DX7 344 aaPredicted RBP5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 NLRP2Q9NX02 1062 aa5.89□□□□□ -1.47
PPP1R9A-201ENST00000289495 BAG4O95429 457 aaKnown RBP5.88□□□□□ -1.47
PPP1R9A-201ENST00000289495 CHMLP26374 656 aa5.88□□□□□ -1.47
PPP1R9A-201ENST00000289495 ANAPC15P60006 121 aa5.88□□□□□ -1.47
PPP1R9A-201ENST00000289495 FAM43AQ8N2R8 423 aa5.88□□□□□ -1.47
PPP1R9A-201ENST00000289495 GRPEL1Q9HAV7 217 aa5.88□□□□□ -1.47
PPP1R9A-201ENST00000289495 DIAPH3Q9NSV4 1193 aa5.88□□□□□ -1.47
PPP1R9A-201ENST00000289495 STAP2Q9UGK3 403 aa5.88□□□□□ -1.47
PPP1R9A-201ENST00000289495 N4BP2Q86UW6 1770 aaPredicted RBP5.88□□□□□ -1.47
PPP1R9A-201ENST00000289495 ALDH1L1O75891 902 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms