RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 C8orf76Q96K31 380 aa17.88■□□□□ 0.45
SHROOM4-201ENST00000289292 KIF4BQ2VIQ3 1234 aa17.88■□□□□ 0.45
SHROOM4-201ENST00000289292 ABCC11Q96J66 1382 aa17.88■□□□□ 0.45
SHROOM4-201ENST00000289292 ZSCAN12O43309 604 aa17.88■□□□□ 0.45
SHROOM4-201ENST00000289292 SDSP20132 328 aa17.88■□□□□ 0.45
SHROOM4-201ENST00000289292 MPHOSPH8Q99549 860 aa17.88■□□□□ 0.45
SHROOM4-201ENST00000289292 USP48Q86UV5 1035 aa17.87■□□□□ 0.45
SHROOM4-201ENST00000289292 GNL3LQ9NVN8 582 aaKnown RBP17.87■□□□□ 0.45
SHROOM4-201ENST00000289292 CALCOCO1Q9P1Z2 691 aa17.87■□□□□ 0.45
SHROOM4-201ENST00000289292 AIDAQ96BJ3 306 aa17.87■□□□□ 0.45
SHROOM4-201ENST00000289292 KIF5CO60282 957 aa17.87■□□□□ 0.45
SHROOM4-201ENST00000289292 PRIM1P49642 420 aaKnown RBP17.87■□□□□ 0.45
SHROOM4-201ENST00000289292 TOM1L2Q6ZVM7 507 aa17.87■□□□□ 0.45
SHROOM4-201ENST00000289292 ZSWIM4Q9H7M6 989 aa17.87■□□□□ 0.45
SHROOM4-201ENST00000289292 IQGAP2Q13576 1575 aa17.86■□□□□ 0.45
SHROOM4-201ENST00000289292 POLR3DP05423 398 aaPredicted RBP17.86■□□□□ 0.45
SHROOM4-201ENST00000289292 ANKRD62A6NC57 917 aa17.86■□□□□ 0.45
SHROOM4-201ENST00000289292 SOGA3Q5TF21 947 aa17.86■□□□□ 0.45
SHROOM4-201ENST00000289292 IQCEQ6IPM2 695 aa17.86■□□□□ 0.45
SHROOM4-201ENST00000289292 CRACR2AQ9BSW2 395 aa17.86■□□□□ 0.45
SHROOM4-201ENST00000289292 U3KPZ7 1027 aaPredicted RBP17.85■□□□□ 0.45
SHROOM4-201ENST00000289292 LRP2BPQ9P2M1 347 aa17.85■□□□□ 0.45
SHROOM4-201ENST00000289292 PLB1Q6P1J6 1458 aa17.85■□□□□ 0.45
SHROOM4-201ENST00000289292 UBE2HP62256 183 aa17.85■□□□□ 0.45
SHROOM4-201ENST00000289292 SNW1Q13573 536 aaKnown RBP17.85■□□□□ 0.45
SHROOM4-201ENST00000289292 STX1AQ16623 288 aa17.85■□□□□ 0.45
SHROOM4-201ENST00000289292 GIMAP7Q8NHV1 300 aa17.85■□□□□ 0.45
SHROOM4-201ENST00000289292 CC2D2AQ9P2K1 1620 aa17.85■□□□□ 0.45
SHROOM4-201ENST00000289292 KIF2AO00139 706 aaPredicted RBP17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 IFIT1P09914 478 aaKnown RBP17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 USP8P40818 1118 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 JARID2Q92833 1246 aaPredicted RBP17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 RPGRIP1LQ68CZ1 1315 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 TMEM132AQ24JP5 1023 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 KIF14Q15058 1648 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 NOLC1Q14978 699 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 TTC12Q9H892 705 aaPredicted RBP17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 LUC7LQ9NQ29 371 aaKnown RBP17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 MINDY4BA8MYZ0 360 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 ANO6Q4KMQ2 910 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 V9GYY5 206 aaPredicted RBP17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 PTPRKQ15262 1439 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 ZNF165P49910 485 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 METTL24Q5JXM2 366 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 JAKMIP3Q5VZ66 844 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 CNNM3Q8NE01 707 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 TCEANC2Q96MN5 208 aa17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 DDX19AQ9NUU7 478 aaKnown RBP17.84■□□□□ 0.45
SHROOM4-201ENST00000289292 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.45
SHROOM4-201ENST00000289292 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.45
SHROOM4-201ENST00000289292 NUP88Q99567 741 aaPredicted RBP17.83■□□□□ 0.45
SHROOM4-201ENST00000289292 ZC3H6P61129 1189 aaKnown RBP17.83■□□□□ 0.45
SHROOM4-201ENST00000289292 RLBP1P12271 317 aa17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 FLIIQ13045 1269 aa17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 WASF1Q92558 559 aa17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 SCAF11Q99590 1463 aaKnown RBP17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 HSP90AA4PQ58FG1 418 aa17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 MEX3CQ5U5Q3 659 aaKnown RBP17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 ZSCAN22P10073 491 aaPredicted RBP17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 MCM5P33992 734 aa17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 USP5P45974 858 aa17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 HDAC1Q13547 482 aaPredicted RBP17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 CEP131Q9UPN4 1083 aa17.83■□□□□ 0.44
SHROOM4-201ENST00000289292 PROSER2Q86WR7 435 aaPredicted RBP17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 ABCF2Q9UG63 623 aa17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 RBM25P49756 843 aaKnown RBP17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 SEPT7Q16181 437 aaKnown RBP17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 DNAAF4Q8WXU2 420 aa17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 SLC52A1Q9NWF4 448 aa17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 LIG1P18858 919 aa17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 MEIS3Q99687 375 aa17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 LRRC2Q9BYS8 371 aa17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 HAND2P61296 217 aa17.82■□□□□ 0.44
SHROOM4-201ENST00000289292 RRAGDQ9NQL2 400 aaPredicted RBP17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 BICDL1Q6ZP65 573 aa17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 PTPRCP08575 1304 aa17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 IGSF3O75054 1194 aa17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 ZGPATQ8N5A5 531 aaKnown RBP17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 SHTN1A0MZ66 631 aa17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 KLHL34Q8N239 644 aa17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 BCCIPQ9P287 314 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 MAP3K2Q9Y2U5 619 aa17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 TAF4BQ92750 862 aa17.81■□□□□ 0.44
SHROOM4-201ENST00000289292 LMAN1P49257 510 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 UVSSAQ2YD98 709 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 IPO4Q8TEX9 1081 aaKnown RBP17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 PPP1R42Q7Z4L9 355 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 ZNF397Q8NF99 534 aaPredicted RBP17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 NOS1P29475 1434 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 CTAGE5O15320 804 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 SPA17Q15506 151 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 CCDC113Q9H0I3 377 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 EVI5LQ96CN4 794 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 GOLGA6L7A0A1B0GV03 622 aa17.8■□□□□ 0.44
SHROOM4-201ENST00000289292 PTCD1O75127 700 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms