RNA–Protein interactions for RNA: ENST00000289175.10

LRRFIP1-202, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-202ENST00000289175 TPRNQ4KMQ1 711 aa17.6■□□□□ 0.41
LRRFIP1-202ENST00000289175 ZNF772Q68DY9 489 aaPredicted RBP17.6■□□□□ 0.41
LRRFIP1-202ENST00000289175 RILPL2Q969X0 211 aa17.59■□□□□ 0.41
LRRFIP1-202ENST00000289175 CHMP4CQ96CF2 233 aa17.59■□□□□ 0.41
LRRFIP1-202ENST00000289175 CHD2O14647 1828 aaKnown RBP17.59■□□□□ 0.41
LRRFIP1-202ENST00000289175 SSH2Q76I76 1423 aa17.59■□□□□ 0.41
LRRFIP1-202ENST00000289175 FBXO41Q8TF61 875 aa17.59■□□□□ 0.41
LRRFIP1-202ENST00000289175 SPATA31A5Q5VU36 1347 aa17.59■□□□□ 0.41
LRRFIP1-202ENST00000289175 SPATA31A7Q8IWB4 1347 aa17.59■□□□□ 0.41
LRRFIP1-202ENST00000289175 CAMTA1Q9Y6Y1 1673 aa17.58■□□□□ 0.41
LRRFIP1-202ENST00000289175 RBM6P78332 1123 aaKnown RBP17.58■□□□□ 0.41
LRRFIP1-202ENST00000289175 ZNF594Q96JF6 807 aaPredicted RBP17.58■□□□□ 0.41
LRRFIP1-202ENST00000289175 PXDNQ92626 1479 aa17.58■□□□□ 0.4
LRRFIP1-202ENST00000289175 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.4
LRRFIP1-202ENST00000289175 CRKLP46109 303 aaKnown RBP17.57■□□□□ 0.4
LRRFIP1-202ENST00000289175 STK11IPQ8N1F8 1099 aa17.57■□□□□ 0.4
LRRFIP1-202ENST00000289175 DDX19BQ9UMR2 479 aa17.57■□□□□ 0.4
LRRFIP1-202ENST00000289175 STRCP1A6NGW2 1772 aa17.57■□□□□ 0.4
LRRFIP1-202ENST00000289175 ZBTB7AO95365 584 aa17.57■□□□□ 0.4
LRRFIP1-202ENST00000289175 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
LRRFIP1-202ENST00000289175 HLFQ16534 295 aa17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 VPS72Q15906 364 aa17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 POLR1AO95602 1720 aaPredicted RBP17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 BLMP54132 1417 aaPredicted RBP17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 CRB1P82279 1406 aa17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 SNAP23O00161 211 aa17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 USPL1Q5W0Q7 1092 aa17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 NDUFB9Q9Y6M9 179 aa17.56■□□□□ 0.4
LRRFIP1-202ENST00000289175 RWDD1Q9H446 243 aaPredicted RBP17.55■□□□□ 0.4
LRRFIP1-202ENST00000289175 RTCBQ9Y3I0 505 aaKnown RBP17.55■□□□□ 0.4
LRRFIP1-202ENST00000289175 MYOM1P52179 1685 aa17.55■□□□□ 0.4
LRRFIP1-202ENST00000289175 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
LRRFIP1-202ENST00000289175 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.54■□□□□ 0.4
LRRFIP1-202ENST00000289175 ITPK1Q13572 414 aa17.54■□□□□ 0.4
LRRFIP1-202ENST00000289175 NOL8Q76FK4 1167 aaKnown RBP17.54■□□□□ 0.4
LRRFIP1-202ENST00000289175 MS4A1P11836 297 aa17.53■□□□□ 0.4
LRRFIP1-202ENST00000289175 CCDC8Q9H0W5 538 aaPredicted RBP17.53■□□□□ 0.4
LRRFIP1-202ENST00000289175 USP32Q8NFA0 1604 aa17.53■□□□□ 0.4
LRRFIP1-202ENST00000289175 SPATA31A6Q5VVP1 1343 aa17.53■□□□□ 0.4
LRRFIP1-202ENST00000289175 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.44e-7■■■■□ 24.3
LRRFIP1-202ENST00000289175 DAXXQ9UER7 740 aaPredicted RBP17.53■□□□□ 0.4
LRRFIP1-202ENST00000289175 NBPF26B4DH59 902 aa17.52■□□□□ 0.4
LRRFIP1-202ENST00000289175 CCDC27Q2M243 656 aa17.52■□□□□ 0.4
LRRFIP1-202ENST00000289175 NBPF14Q5TI25 921 aa17.52■□□□□ 0.4
LRRFIP1-202ENST00000289175 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.4
LRRFIP1-202ENST00000289175 NBPF5PQ86XG9 351 aaPredicted RBP17.52■□□□□ 0.4
LRRFIP1-202ENST00000289175 NBPF15Q8N660 670 aa17.52■□□□□ 0.4
LRRFIP1-202ENST00000289175 ZNF521Q96K83 1311 aa17.52■□□□□ 0.4
LRRFIP1-202ENST00000289175 LMBR1LQ6UX01 489 aa17.52■□□□□ 0.4
LRRFIP1-202ENST00000289175 SNRKQ9NRH2 765 aa17.52■□□□□ 0.39
LRRFIP1-202ENST00000289175 CNNM1Q9NRU3 951 aa17.52■□□□□ 0.39
LRRFIP1-202ENST00000289175 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.39
LRRFIP1-202ENST00000289175 DCCP43146 1447 aa17.51■□□□□ 0.39
LRRFIP1-202ENST00000289175 PDGFDQ9GZP0 370 aaPredicted RBP17.51■□□□□ 0.39
LRRFIP1-202ENST00000289175 XRN1Q8IZH2 1706 aaKnown RBP17.51■□□□□ 0.39
LRRFIP1-202ENST00000289175 PALLDQ8WX93 1383 aa17.51■□□□□ 0.39
LRRFIP1-202ENST00000289175 G3V3G9 751 aa17.5■□□□□ 0.39
LRRFIP1-202ENST00000289175 GNAI2P04899 355 aa17.5■□□□□ 0.39
LRRFIP1-202ENST00000289175 DCAF8Q5TAQ9 597 aa17.5■□□□□ 0.39
LRRFIP1-202ENST00000289175 PPP1R42Q7Z4L9 355 aa17.5■□□□□ 0.39
LRRFIP1-202ENST00000289175 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
LRRFIP1-202ENST00000289175 COL5A2P05997 1499 aaPredicted RBP17.5■□□□□ 0.39
LRRFIP1-202ENST00000289175 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
LRRFIP1-202ENST00000289175 PDZRN3Q9UPQ7 1066 aa17.5■□□□□ 0.39
LRRFIP1-202ENST00000289175 ERVV-2B6SEH9 535 aa17.49■□□□□ 0.39
LRRFIP1-202ENST00000289175 SLC4A8Q2Y0W8 1093 aa17.49■□□□□ 0.39
LRRFIP1-202ENST00000289175 TRAPPC3LQ5T215 181 aa17.49■□□□□ 0.39
LRRFIP1-202ENST00000289175 SLC4A9Q96Q91 983 aa17.49■□□□□ 0.39
LRRFIP1-202ENST00000289175 MFAP1P55081 439 aaKnown RBP17.49■□□□□ 0.39
LRRFIP1-202ENST00000289175 G3BP1Q13283 466 aaKnown RBP eCLIP17.49■□□□□ 0.39
LRRFIP1-202ENST00000289175 CCDC87Q9NVE4 849 aa17.49■□□□□ 0.39
LRRFIP1-202ENST00000289175 ITSN1Q15811 1721 aa17.49■□□□□ 0.39
LRRFIP1-202ENST00000289175 DNAJC2Q99543 621 aaKnown RBP17.49■□□□□ 0.39
LRRFIP1-202ENST00000289175 R3HDM1Q15032 1099 aaKnown RBP17.48■□□□□ 0.39
LRRFIP1-202ENST00000289175 KCNJ4P48050 445 aa17.48■□□□□ 0.39
LRRFIP1-202ENST00000289175 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
LRRFIP1-202ENST00000289175 OTUD7AQ8TE49 926 aaPredicted RBP17.48■□□□□ 0.39
LRRFIP1-202ENST00000289175 PNMA6EA0A0J9YXQ4 647 aa17.48■□□□□ 0.39
LRRFIP1-202ENST00000289175 KSR2Q6VAB6 950 aa17.47■□□□□ 0.39
LRRFIP1-202ENST00000289175 RTL1A6NKG5 1358 aa17.47■□□□□ 0.39
LRRFIP1-202ENST00000289175 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
LRRFIP1-202ENST00000289175 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
LRRFIP1-202ENST00000289175 SLC4A3P48751 1232 aa17.47■□□□□ 0.39
LRRFIP1-202ENST00000289175 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.39
LRRFIP1-202ENST00000289175 CCDC57Q2TAC2 916 aa17.46■□□□□ 0.39
LRRFIP1-202ENST00000289175 TAF5LO75529 589 aa17.46■□□□□ 0.39
LRRFIP1-202ENST00000289175 SETD1AO15047 1707 aaKnown RBP17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 PIK3C2AO00443 1686 aa17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 LINC00116Q8NCU8 138 aa17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 MPHOSPH8Q99549 860 aa17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 BICC1Q9H694 974 aaKnown RBP17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 ZNF142P52746 1687 aaPredicted RBP17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 HMMRO75330 724 aa17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 VPS37DQ86XT2 251 aa17.45■□□□□ 0.38
LRRFIP1-202ENST00000289175 CDCA7Q9BWT1 371 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms