RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 UBTFL1P0CB47 393 aaPredicted RBP26.61■■□□□ 1.85
GFRA3-201ENST00000274721 NOP58Q9Y2X3 529 aaKnown RBP26.6■■□□□ 1.85
GFRA3-201ENST00000274721 LRRFIP2Q9Y608 721 aaKnown RBP26.6■■□□□ 1.85
GFRA3-201ENST00000274721 ZBTB47Q9UFB7 747 aaPredicted RBP26.59■■□□□ 1.85
GFRA3-201ENST00000274721 MAP3K2Q9Y2U5 619 aa26.59■■□□□ 1.85
GFRA3-201ENST00000274721 USP16Q9Y5T5 823 aa26.59■■□□□ 1.85
GFRA3-201ENST00000274721 COL16A1Q07092 1604 aaPredicted RBP26.59■■□□□ 1.85
GFRA3-201ENST00000274721 PLEKHM2Q8IWE5 1019 aa26.58■■□□□ 1.85
GFRA3-201ENST00000274721 PNMA6EA0A0J9YXQ4 647 aa26.58■■□□□ 1.85
GFRA3-201ENST00000274721 DDX54Q8TDD1 881 aaKnown RBP26.58■■□□□ 1.85
GFRA3-201ENST00000274721 DDRGK1Q96HY6 314 aa26.58■■□□□ 1.85
GFRA3-201ENST00000274721 ALDH1L1O75891 902 aa26.57■■□□□ 1.84
GFRA3-201ENST00000274721 LRP10Q7Z4F1 713 aa26.57■■□□□ 1.84
GFRA3-201ENST00000274721 GLI3P10071 1580 aa26.57■■□□□ 1.84
GFRA3-201ENST00000274721 USP35Q9P2H5 1018 aa26.56■■□□□ 1.84
GFRA3-201ENST00000274721 DDX58O95786 925 aaKnown RBP26.56■■□□□ 1.84
GFRA3-201ENST00000274721 NBPF7P0C2Y1 421 aaPredicted RBP26.56■■□□□ 1.84
GFRA3-201ENST00000274721 DISP2A7MBM2 1401 aa26.55■■□□□ 1.84
GFRA3-201ENST00000274721 C16orf71Q8IYS4 520 aaPredicted RBP26.54■■□□□ 1.84
GFRA3-201ENST00000274721 SSH3Q8TE77 659 aa26.54■■□□□ 1.84
GFRA3-201ENST00000274721 PHLPP1O60346 1717 aa26.53■■□□□ 1.84
GFRA3-201ENST00000274721 LINS1Q8NG48 757 aa26.53■■□□□ 1.84
GFRA3-201ENST00000274721 IBTKQ9P2D0 1353 aaPredicted RBP26.52■■□□□ 1.84
GFRA3-201ENST00000274721 UBR2Q8IWV8 1755 aa26.52■■□□□ 1.84
GFRA3-201ENST00000274721 SMARCA5O60264 1052 aaPredicted RBP26.51■■□□□ 1.83
GFRA3-201ENST00000274721 TOM1O60784 492 aa26.51■■□□□ 1.83
GFRA3-201ENST00000274721 POLA2Q14181 598 aa26.51■■□□□ 1.83
GFRA3-201ENST00000274721 UPF2Q9HAU5 1272 aaKnown RBP26.51■■□□□ 1.83
GFRA3-201ENST00000274721 AIMP1Q12904 312 aaKnown RBP26.51■■□□□ 1.83
GFRA3-201ENST00000274721 TBC1D32Q96NH3 1257 aa26.51■■□□□ 1.83
GFRA3-201ENST00000274721 PAPPAQ13219 1627 aa26.5■■□□□ 1.83
GFRA3-201ENST00000274721 MYL6BP14649 208 aa26.5■■□□□ 1.83
GFRA3-201ENST00000274721 COPS6Q7L5N1 327 aa26.5■■□□□ 1.83
GFRA3-201ENST00000274721 XAGE3Q8WTP9 111 aa26.5■■□□□ 1.83
GFRA3-201ENST00000274721 EXOC6BQ9Y2D4 811 aa26.5■■□□□ 1.83
GFRA3-201ENST00000274721 TNS2Q63HR2 1409 aa26.49■■□□□ 1.83
GFRA3-201ENST00000274721 KCPQ6ZWJ8 1503 aa26.49■■□□□ 1.83
GFRA3-201ENST00000274721 PPP1R42Q7Z4L9 355 aa26.49■■□□□ 1.83
GFRA3-201ENST00000274721 OTUD7AQ8TE49 926 aaPredicted RBP26.49■■□□□ 1.83
GFRA3-201ENST00000274721 LAMB4A4D0S4 1761 aa26.48■■□□□ 1.83
GFRA3-201ENST00000274721 UTYO14607 1347 aa26.48■■□□□ 1.83
GFRA3-201ENST00000274721 ERBB4Q15303 1308 aa26.48■■□□□ 1.83
GFRA3-201ENST00000274721 APBB1O00213 710 aa26.48■■□□□ 1.83
GFRA3-201ENST00000274721 GSPT1P15170 499 aaKnown RBP26.48■■□□□ 1.83
GFRA3-201ENST00000274721 CWF19L2Q2TBE0 894 aaKnown RBP26.48■■□□□ 1.83
GFRA3-201ENST00000274721 TOGARAM1Q9Y4F4 1720 aa26.48■■□□□ 1.83
GFRA3-201ENST00000274721 MTX1Q13505 466 aa26.47■■□□□ 1.83
GFRA3-201ENST00000274721 TTC22Q5TAA0 569 aa26.47■■□□□ 1.83
GFRA3-201ENST00000274721 ERICH6Q7L0X2 663 aa26.47■■□□□ 1.83
GFRA3-201ENST00000274721 RIC3Q7Z5B4 369 aa26.47■■□□□ 1.83
GFRA3-201ENST00000274721 PLCH1Q4KWH8 1693 aa26.47■■□□□ 1.83
GFRA3-201ENST00000274721 LRRCC1Q9C099 1032 aa26.46■■□□□ 1.83
GFRA3-201ENST00000274721 OSBPL3Q9H4L5 887 aa26.46■■□□□ 1.83
GFRA3-201ENST00000274721 IGKV5-2P06315 115 aa26.46■■□□□ 1.83
GFRA3-201ENST00000274721 ANKRD13DQ6ZTN6 518 aa26.46■■□□□ 1.83
GFRA3-201ENST00000274721 C9orf78Q9NZ63 289 aaPredicted RBP26.46■■□□□ 1.83
GFRA3-201ENST00000274721 HDAC5Q9UQL6 1122 aa26.46■■□□□ 1.83
GFRA3-201ENST00000274721 METTL22Q9BUU2 404 aaPredicted RBP26.45■■□□□ 1.82
GFRA3-201ENST00000274721 SALL3Q9BXA9 1300 aa26.44■■□□□ 1.82
GFRA3-201ENST00000274721 GRM8O00222 908 aa26.44■■□□□ 1.82
GFRA3-201ENST00000274721 TMOD3Q9NYL9 352 aa26.44■■□□□ 1.82
GFRA3-201ENST00000274721 SRGAP3O43295 1099 aa26.43■■□□□ 1.82
GFRA3-201ENST00000274721 NBPF26B4DH59 902 aa26.43■■□□□ 1.82
GFRA3-201ENST00000274721 ADAMTS2O95450 1211 aa26.43■■□□□ 1.82
GFRA3-201ENST00000274721 PIP4K2AP48426 406 aaPredicted RBP26.43■■□□□ 1.82
GFRA3-201ENST00000274721 NBPF14Q5TI25 921 aa26.43■■□□□ 1.82
GFRA3-201ENST00000274721 NBPF10Q6P3W6 841 aaKnown RBP26.43■■□□□ 1.82
GFRA3-201ENST00000274721 NBPF15Q8N660 670 aa26.43■■□□□ 1.82
GFRA3-201ENST00000274721 ANP32EQ9BTT0 268 aa26.43■■□□□ 1.82
GFRA3-201ENST00000274721 MFAP1P55081 439 aaKnown RBP26.42■■□□□ 1.82
GFRA3-201ENST00000274721 PIP4K2BP78356 416 aa26.42■■□□□ 1.82
GFRA3-201ENST00000274721 NEXNQ0ZGT2 675 aa26.42■■□□□ 1.82
GFRA3-201ENST00000274721 NEURL1BA8MQ27 555 aa26.41■■□□□ 1.82
GFRA3-201ENST00000274721 RAB11FIP3O75154 756 aa26.41■■□□□ 1.82
GFRA3-201ENST00000274721 PIGBQ92521 554 aa26.41■■□□□ 1.82
GFRA3-201ENST00000274721 EXOC5O00471 708 aa26.41■■□□□ 1.82
GFRA3-201ENST00000274721 PTCD1O75127 700 aaKnown RBP26.41■■□□□ 1.82
GFRA3-201ENST00000274721 PDE1AP54750 535 aa26.41■■□□□ 1.82
GFRA3-201ENST00000274721 TBC1D9Q6ZT07 1266 aa26.41■■□□□ 1.82
GFRA3-201ENST00000274721 KAZALD1Q96I82 304 aa26.4■■□□□ 1.82
GFRA3-201ENST00000274721 C22orf23Q9BZE7 217 aa26.4■■□□□ 1.82
GFRA3-201ENST00000274721 CDCA7Q9BWT1 371 aaPredicted RBP26.39■■□□□ 1.82
GFRA3-201ENST00000274721 THRAP3Q9Y2W1 955 aaKnown RBP26.39■■□□□ 1.82
GFRA3-201ENST00000274721 SPATA31A1Q5TZJ5 1347 aa26.39■■□□□ 1.82
GFRA3-201ENST00000274721 NRAPQ86VF7 1730 aa26.39■■□□□ 1.82
GFRA3-201ENST00000274721 CDC45O75419 566 aa26.39■■□□□ 1.81
GFRA3-201ENST00000274721 SURF6O75683 361 aaKnown RBP26.39■■□□□ 1.81
GFRA3-201ENST00000274721 GCKRQ14397 625 aa26.39■■□□□ 1.81
GFRA3-201ENST00000274721 PLBD2Q8NHP8 589 aa26.39■■□□□ 1.81
GFRA3-201ENST00000274721 BCL11AQ9H165 835 aa26.39■■□□□ 1.81
GFRA3-201ENST00000274721 MYD88Q99836 296 aa26.38■■□□□ 1.81
GFRA3-201ENST00000274721 LRP6O75581 1613 aa26.38■■□□□ 1.81
GFRA3-201ENST00000274721 WNK3Q9BYP7 1800 aa26.38■■□□□ 1.81
GFRA3-201ENST00000274721 VSIG10Q8N0Z9 540 aa26.37■■□□□ 1.81
GFRA3-201ENST00000274721 SUCLG2Q96I99 432 aa26.37■■□□□ 1.81
GFRA3-201ENST00000274721 ASAP1Q9ULH1 1129 aa26.37■■□□□ 1.81
GFRA3-201ENST00000274721 ITGB4P16144 1822 aa26.37■■□□□ 1.81
GFRA3-201ENST00000274721 A1BGP04217 495 aa26.36■■□□□ 1.81
GFRA3-201ENST00000274721 ATG3Q9NT62 314 aa26.36■■□□□ 1.81
GFRA3-201ENST00000274721 STAP2Q9UGK3 403 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms