RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
RPS3A-201ENST00000274065 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
RPS3A-201ENST00000274065 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
RPS3A-201ENST00000274065 MPRIPQ6WCQ1 1025 aa11.91□□□□□ -0.5
RPS3A-201ENST00000274065 USHBP1Q8N6Y0 703 aa11.91□□□□□ -0.5
RPS3A-201ENST00000274065 RBM46Q8TBY0 533 aaKnown RBP11.91□□□□□ -0.5
RPS3A-201ENST00000274065 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
RPS3A-201ENST00000274065 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
RPS3A-201ENST00000274065 PXDNLA1KZ92 1463 aa11.9□□□□□ -0.5
RPS3A-201ENST00000274065 NBPF6Q5VWK0 638 aa11.9□□□□□ -0.5
RPS3A-201ENST00000274065 HDGFL2Q7Z4V5 671 aaPredicted RBP11.9□□□□□ -0.5
RPS3A-201ENST00000274065 NBPF4Q96M43 638 aa11.9□□□□□ -0.5
RPS3A-201ENST00000274065 BCS1LQ9Y276 419 aa11.9□□□□□ -0.5
RPS3A-201ENST00000274065 A0A1W2PP64 1363 aa11.9□□□□□ -0.5
RPS3A-201ENST00000274065 C4BP0C0L5 1744 aa11.89□□□□□ -0.51
RPS3A-201ENST00000274065 AMPHP49418 695 aa11.89□□□□□ -0.51
RPS3A-201ENST00000274065 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
RPS3A-201ENST00000274065 A0A0G2JLW4 131 aa11.88□□□□□ -0.51
RPS3A-201ENST00000274065 SSFA2P28290 1259 aa11.88□□□□□ -0.51
RPS3A-201ENST00000274065 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
RPS3A-201ENST00000274065 SPNS2Q8IVW8 549 aa11.88□□□□□ -0.51
RPS3A-201ENST00000274065 LINC00116Q8NCU8 138 aa11.88□□□□□ -0.51
RPS3A-201ENST00000274065 RGPD2P0DJD1 1756 aa11.87□□□□□ -0.51
RPS3A-201ENST00000274065 MMP10P09238 476 aa11.87□□□□□ -0.51
RPS3A-201ENST00000274065 HMGB2P26583 209 aaKnown RBP11.87□□□□□ -0.51
RPS3A-201ENST00000274065 FSTL1Q12841 308 aa11.87□□□□□ -0.51
RPS3A-201ENST00000274065 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
RPS3A-201ENST00000274065 RAPGEF4Q8WZA2 1011 aa11.87□□□□□ -0.51
RPS3A-201ENST00000274065 KRTAP3-3Q9BYR6 98 aa11.87□□□□□ -0.51
RPS3A-201ENST00000274065 KRTAP3-2Q9BYR7 98 aa11.87□□□□□ -0.51
RPS3A-201ENST00000274065 UBR3Q6ZT12 1888 aa11.87□□□□□ -0.51
RPS3A-201ENST00000274065 CGNL1Q0VF96 1302 aa11.86□□□□□ -0.51
RPS3A-201ENST00000274065 CYP27B1O15528 508 aa11.86□□□□□ -0.51
RPS3A-201ENST00000274065 C9orf131Q5VYM1 1079 aa11.86□□□□□ -0.51
RPS3A-201ENST00000274065 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
RPS3A-201ENST00000274065 TERF2IPQ9NYB0 399 aa11.86□□□□□ -0.51
RPS3A-201ENST00000274065 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
RPS3A-201ENST00000274065 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
RPS3A-201ENST00000274065 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
RPS3A-201ENST00000274065 FCHSD2O94868 740 aa11.85□□□□□ -0.51
RPS3A-201ENST00000274065 DPEP1P16444 411 aa11.85□□□□□ -0.51
RPS3A-201ENST00000274065 TATP17735 454 aaPredicted RBP11.85□□□□□ -0.51
RPS3A-201ENST00000274065 TGFB2P61812 414 aa11.85□□□□□ -0.51
RPS3A-201ENST00000274065 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
RPS3A-201ENST00000274065 PIGBQ92521 554 aa11.85□□□□□ -0.51
RPS3A-201ENST00000274065 COG3Q96JB2 828 aa11.85□□□□□ -0.51
RPS3A-201ENST00000274065 KIAA1551Q9HCM1 1747 aa11.85□□□□□ -0.51
RPS3A-201ENST00000274065 LOC102724428A0A0B4J2F2 783 aa11.84□□□□□ -0.51
RPS3A-201ENST00000274065 GNPATO15228 680 aa11.84□□□□□ -0.51
RPS3A-201ENST00000274065 HSPA1AP0DMV8 641 aaKnown RBP11.84□□□□□ -0.51
RPS3A-201ENST00000274065 HSPA1BP0DMV9 641 aaKnown RBP11.84□□□□□ -0.51
RPS3A-201ENST00000274065 SIK1P57059 783 aa11.84□□□□□ -0.51
RPS3A-201ENST00000274065 ITPK1Q13572 414 aa11.84□□□□□ -0.51
RPS3A-201ENST00000274065 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
RPS3A-201ENST00000274065 KCPQ6ZWJ8 1503 aa11.84□□□□□ -0.51
RPS3A-201ENST00000274065 C10orf71Q711Q0 1435 aa11.84□□□□□ -0.51
RPS3A-201ENST00000274065 N4BP2Q86UW6 1770 aaPredicted RBP11.83□□□□□ -0.52
RPS3A-201ENST00000274065 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
RPS3A-201ENST00000274065 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
RPS3A-201ENST00000274065 RTL1A6NKG5 1358 aa11.82□□□□□ -0.52
RPS3A-201ENST00000274065 KCNA3P22001 575 aa11.82□□□□□ -0.52
RPS3A-201ENST00000274065 HS6ST3Q8IZP7 471 aa11.82□□□□□ -0.52
RPS3A-201ENST00000274065 PLEKHG2Q9H7P9 1386 aa11.81□□□□□ -0.52
RPS3A-201ENST00000274065 HSP90AB2PQ58FF8 381 aa11.81□□□□□ -0.52
RPS3A-201ENST00000274065 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
RPS3A-201ENST00000274065 ASAP1Q9ULH1 1129 aa11.81□□□□□ -0.52
RPS3A-201ENST00000274065 KDM2BQ8NHM5 1336 aa11.81□□□□□ -0.52
RPS3A-201ENST00000274065 MAP2P11137 1827 aaKnown RBP11.81□□□□□ -0.52
RPS3A-201ENST00000274065 KIF13BQ9NQT8 1826 aa11.81□□□□□ -0.52
RPS3A-201ENST00000274065 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
RPS3A-201ENST00000274065 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
RPS3A-201ENST00000274065 RNF181Q9P0P0 153 aa11.8□□□□□ -0.52
RPS3A-201ENST00000274065 SMG6Q86US8 1419 aaKnown RBP11.79□□□□□ -0.52
RPS3A-201ENST00000274065 SLC34A2O95436 690 aa11.79□□□□□ -0.52
RPS3A-201ENST00000274065 TMF1P82094 1093 aa11.79□□□□□ -0.52
RPS3A-201ENST00000274065 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
RPS3A-201ENST00000274065 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
RPS3A-201ENST00000274065 DCAF5Q96JK2 942 aa11.79□□□□□ -0.52
RPS3A-201ENST00000274065 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
RPS3A-201ENST00000274065 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
RPS3A-201ENST00000274065 TRAPPC3LQ5T215 181 aa11.78□□□□□ -0.52
RPS3A-201ENST00000274065 CARD11Q9BXL7 1154 aa11.78□□□□□ -0.52
RPS3A-201ENST00000274065 ITGB4P16144 1822 aa11.78□□□□□ -0.52
RPS3A-201ENST00000274065 GYS1P13807 737 aa11.77□□□□□ -0.53
RPS3A-201ENST00000274065 NEUROD1Q13562 356 aa11.77□□□□□ -0.53
RPS3A-201ENST00000274065 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
RPS3A-201ENST00000274065 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.53
RPS3A-201ENST00000274065 GGNBP2Q9H3C7 697 aa11.77□□□□□ -0.53
RPS3A-201ENST00000274065 ATG3Q9NT62 314 aa11.77□□□□□ -0.53
RPS3A-201ENST00000274065 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.53
RPS3A-201ENST00000274065 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
RPS3A-201ENST00000274065 RTCBQ9Y3I0 505 aaKnown RBP11.77□□□□□ -0.53
RPS3A-201ENST00000274065 INSRP06213 1382 aa11.77□□□□□ -0.53
RPS3A-201ENST00000274065 FYB1O15117 783 aa11.76□□□□□ -0.53
RPS3A-201ENST00000274065 PPP1R37O75864 691 aa11.76□□□□□ -0.53
RPS3A-201ENST00000274065 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
RPS3A-201ENST00000274065 VARS2Q5ST30 1063 aaKnown RBP11.76□□□□□ -0.53
RPS3A-201ENST00000274065 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
RPS3A-201ENST00000274065 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
RPS3A-201ENST00000274065 PKD1L3Q7Z443 1732 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms