RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 DUSP27Q5VZP5 1158 aa23.12■■□□□ 1.29
SEC22C-202ENST00000273156 TTC5Q8N0Z6 440 aa23.12■■□□□ 1.29
SEC22C-202ENST00000273156 TRMT2AQ8IZ69 625 aaKnown RBP23.11■■□□□ 1.29
SEC22C-202ENST00000273156 GRIN3BO60391 1043 aa23.11■■□□□ 1.29
SEC22C-202ENST00000273156 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
SEC22C-202ENST00000273156 SLC39A6Q13433 755 aa23.1■■□□□ 1.29
SEC22C-202ENST00000273156 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
SEC22C-202ENST00000273156 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
SEC22C-202ENST00000273156 MMP10P09238 476 aa23.09■■□□□ 1.29
SEC22C-202ENST00000273156 IL17REQ8NFR9 667 aa23.09■■□□□ 1.29
SEC22C-202ENST00000273156 CCDC87Q9NVE4 849 aa23.09■■□□□ 1.29
SEC22C-202ENST00000273156 RCAN3Q9UKA8 241 aa23.09■■□□□ 1.29
SEC22C-202ENST00000273156 DNAJC10Q8IXB1 793 aa23.08■■□□□ 1.29
SEC22C-202ENST00000273156 ADAMTS7Q9UKP4 1686 aa23.08■■□□□ 1.28
SEC22C-202ENST00000273156 FKBP8Q14318 412 aa23.08■■□□□ 1.28
SEC22C-202ENST00000273156 RTF1Q92541 710 aaKnown RBP23.08■■□□□ 1.28
SEC22C-202ENST00000273156 TRIM35Q9UPQ4 493 aa23.08■■□□□ 1.28
SEC22C-202ENST00000273156 STARD3NLO95772 234 aa23.07■■□□□ 1.28
SEC22C-202ENST00000273156 GYS1P13807 737 aa23.07■■□□□ 1.28
SEC22C-202ENST00000273156 INTS5Q6P9B9 1019 aaKnown RBP23.07■■□□□ 1.28
SEC22C-202ENST00000273156 TEX13AQ9BXU3 409 aaPredicted RBP23.07■■□□□ 1.28
SEC22C-202ENST00000273156 SPINK5Q9NQ38 1064 aaPredicted RBP23.07■■□□□ 1.28
SEC22C-202ENST00000273156 UTRNP46939 3433 aa23.07■■□□□ 1.28
SEC22C-202ENST00000273156 CYP19A1P11511 503 aaPredicted RBP23.06■■□□□ 1.28
SEC22C-202ENST00000273156 LMOD3Q0VAK6 560 aa23.06■■□□□ 1.28
SEC22C-202ENST00000273156 ZNF790Q6PG37 636 aa23.06■■□□□ 1.28
SEC22C-202ENST00000273156 COL5A3P25940 1745 aaPredicted RBP23.06■■□□□ 1.28
SEC22C-202ENST00000273156 CEMIPQ8WUJ3 1361 aa23.06■■□□□ 1.28
SEC22C-202ENST00000273156 CICQ96RK0 1608 aaPredicted RBP23.06■■□□□ 1.28
SEC22C-202ENST00000273156 HTATSF1O43719 755 aaKnown RBP23.05■■□□□ 1.28
SEC22C-202ENST00000273156 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
SEC22C-202ENST00000273156 PARP3Q9Y6F1 533 aa23.04■■□□□ 1.28
SEC22C-202ENST00000273156 IL16Q14005 1332 aa23.04■■□□□ 1.28
SEC22C-202ENST00000273156 ZPR1O75312 459 aa23.04■■□□□ 1.28
SEC22C-202ENST00000273156 CALD1Q05682 793 aaKnown RBP23.04■■□□□ 1.28
SEC22C-202ENST00000273156 USP42Q9H9J4 1324 aaKnown RBP23.04■■□□□ 1.28
SEC22C-202ENST00000273156 RNF123Q5XPI4 1314 aa23.03■■□□□ 1.28
SEC22C-202ENST00000273156 KCPQ6ZWJ8 1503 aa23.03■■□□□ 1.28
SEC22C-202ENST00000273156 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
SEC22C-202ENST00000273156 BTBD11A6QL63 1104 aa23.01■■□□□ 1.27
SEC22C-202ENST00000273156 TGFB2P61812 414 aa23.01■■□□□ 1.27
SEC22C-202ENST00000273156 SOS1Q07889 1333 aaPredicted RBP23.01■■□□□ 1.27
SEC22C-202ENST00000273156 ZNF496Q96IT1 587 aaPredicted RBP23■■□□□ 1.27
SEC22C-202ENST00000273156 YBX3P16989 372 aaKnown RBP eCLIP23■■□□□ 1.272e-7■■□□□ 12.2
SEC22C-202ENST00000273156 HEG1Q9ULI3 1381 aa22.99■■□□□ 1.27
SEC22C-202ENST00000273156 GOLGB1Q14789 3259 aaKnown RBP22.99■■□□□ 1.27
SEC22C-202ENST00000273156 TJP1Q07157 1748 aa22.99■■□□□ 1.27
SEC22C-202ENST00000273156 ZBTB1Q9Y2K1 713 aa22.98■■□□□ 1.27
SEC22C-202ENST00000273156 MYH14Q7Z406 1995 aaKnown RBP22.98■■□□□ 1.27
SEC22C-202ENST00000273156 A0A087WZG4 1122 aa22.97■■□□□ 1.27
SEC22C-202ENST00000273156 ERICH6BQ5W0A0 696 aa22.97■■□□□ 1.27
SEC22C-202ENST00000273156 SRP68Q9UHB9 627 aaKnown RBP22.97■■□□□ 1.27
SEC22C-202ENST00000273156 NARFQ9UHQ1 456 aa22.97■■□□□ 1.27
SEC22C-202ENST00000273156 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
SEC22C-202ENST00000273156 COL15A1P39059 1388 aa22.96■■□□□ 1.27
SEC22C-202ENST00000273156 MCM10Q7L590 875 aa22.96■■□□□ 1.27
SEC22C-202ENST00000273156 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
SEC22C-202ENST00000273156 CANXP27824 592 aaKnown RBP22.95■■□□□ 1.26
SEC22C-202ENST00000273156 RRP1P56182 461 aaKnown RBP22.95■■□□□ 1.26
SEC22C-202ENST00000273156 USPL1Q5W0Q7 1092 aa22.94■■□□□ 1.26
SEC22C-202ENST00000273156 C10orf71Q711Q0 1435 aa22.94■■□□□ 1.26
SEC22C-202ENST00000273156 EIF5P55010 431 aaKnown RBP22.93■■□□□ 1.26
SEC22C-202ENST00000273156 IRX6P78412 446 aaPredicted RBP22.93■■□□□ 1.26
SEC22C-202ENST00000273156 TM4SF1P30408 202 aa22.93■■□□□ 1.26
SEC22C-202ENST00000273156 TAF7Q15545 349 aaPredicted RBP22.93■■□□□ 1.26
SEC22C-202ENST00000273156 UBR2Q8IWV8 1755 aa22.92■■□□□ 1.26
SEC22C-202ENST00000273156 IL6STP40189 918 aaPredicted RBP22.92■■□□□ 1.26
SEC22C-202ENST00000273156 GNAI1P63096 354 aa22.92■■□□□ 1.26
SEC22C-202ENST00000273156 FANCIQ9NVI1 1328 aa22.91■■□□□ 1.26
SEC22C-202ENST00000273156 SNRPA1P09661 255 aaKnown RBP22.91■■□□□ 1.26
SEC22C-202ENST00000273156 CT47B1P0C2W7 299 aaPredicted RBP22.91■■□□□ 1.26
SEC22C-202ENST00000273156 IFT57Q9NWB7 429 aa22.91■■□□□ 1.26
SEC22C-202ENST00000273156 CHD4Q14839 1912 aa22.91■■□□□ 1.26
SEC22C-202ENST00000273156 C4AP0C0L4 1744 aa22.91■■□□□ 1.26
SEC22C-202ENST00000273156 DDR1Q08345 913 aa22.9■■□□□ 1.26
SEC22C-202ENST00000273156 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.9■■□□□ 1.26
SEC22C-202ENST00000273156 VIRMAQ69YN4 1812 aaKnown RBP22.9■■□□□ 1.26
SEC22C-202ENST00000273156 PXDNLA1KZ92 1463 aa22.9■■□□□ 1.26
SEC22C-202ENST00000273156 POLRMTO00411 1230 aaKnown RBP22.9■■□□□ 1.26
SEC22C-202ENST00000273156 DCTN1Q14203 1278 aa22.9■■□□□ 1.26
SEC22C-202ENST00000273156 A0A0G2JLW4 131 aa22.89■■□□□ 1.25
SEC22C-202ENST00000273156 TSR2Q969E8 191 aaKnown RBP22.89■■□□□ 1.25
SEC22C-202ENST00000273156 THUMPD2Q9BTF0 503 aaKnown RBP22.89■■□□□ 1.25
SEC22C-202ENST00000273156 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.25
SEC22C-202ENST00000273156 KCNQ3O43525 872 aa22.88■■□□□ 1.25
SEC22C-202ENST00000273156 CFAP44Q96MT7 982 aa22.88■■□□□ 1.25
SEC22C-202ENST00000273156 SIPA1L3O60292 1781 aaPredicted RBP22.88■■□□□ 1.25
SEC22C-202ENST00000273156 DPEP1P16444 411 aa22.87■■□□□ 1.25
SEC22C-202ENST00000273156 NFIXQ14938 502 aa22.87■■□□□ 1.25
SEC22C-202ENST00000273156 ZNF330Q9Y3S2 320 aaPredicted RBP22.86■■□□□ 1.25
SEC22C-202ENST00000273156 ZNF853P0CG23 659 aa22.86■■□□□ 1.25
SEC22C-202ENST00000273156 EXOSC9Q06265 439 aaKnown RBP22.86■■□□□ 1.25
SEC22C-202ENST00000273156 PIM2Q9P1W9 311 aa22.86■■□□□ 1.25
SEC22C-202ENST00000273156 BCS1LQ9Y276 419 aa22.86■■□□□ 1.25
SEC22C-202ENST00000273156 A1BGP04217 495 aa22.85■■□□□ 1.25
SEC22C-202ENST00000273156 BCL2L12Q9HB09 334 aa22.85■■□□□ 1.25
SEC22C-202ENST00000273156 WWC3Q9ULE0 1092 aa22.85■■□□□ 1.25
SEC22C-202ENST00000273156 USP16Q9Y5T5 823 aa22.84■■□□□ 1.25
SEC22C-202ENST00000273156 KIF13BQ9NQT8 1826 aa22.84■■□□□ 1.25
SEC22C-202ENST00000273156 SERPINB2P05120 415 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms