RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 V9GYY5 206 aaPredicted RBP20.58■□□□□ 0.89
LRRC56-201ENST00000270115 CCDC192P0DO97 292 aa20.58■□□□□ 0.88
LRRC56-201ENST00000270115 PLCD3Q8N3E9 789 aa20.58■□□□□ 0.88
LRRC56-201ENST00000270115 KIF18AQ8NI77 898 aa20.57■□□□□ 0.88
LRRC56-201ENST00000270115 MYO5BQ9ULV0 1848 aa20.57■□□□□ 0.88
LRRC56-201ENST00000270115 F6X3S4 739 aa20.57■□□□□ 0.88
LRRC56-201ENST00000270115 TERF2Q15554 542 aa20.57■□□□□ 0.88
LRRC56-201ENST00000270115 PRAM1Q96QH2 718 aa20.56■□□□□ 0.88
LRRC56-201ENST00000270115 SMC3Q9UQE7 1217 aa20.56■□□□□ 0.88
LRRC56-201ENST00000270115 MORC2Q9Y6X9 1032 aaPredicted RBP20.56■□□□□ 0.88
LRRC56-201ENST00000270115 MAP4K4O95819 1239 aaPredicted RBP20.56■□□□□ 0.88
LRRC56-201ENST00000270115 TPD52L1Q16890 204 aaPredicted RBP20.56■□□□□ 0.88
LRRC56-201ENST00000270115 CLTCQ00610 1675 aaKnown RBP20.54■□□□□ 0.88
LRRC56-201ENST00000270115 CPA1P15085 419 aa20.54■□□□□ 0.88
LRRC56-201ENST00000270115 AK2P54819 239 aa20.54■□□□□ 0.88
LRRC56-201ENST00000270115 RIMS2Q9UQ26 1411 aa20.54■□□□□ 0.88
LRRC56-201ENST00000270115 CKAP2LQ8IYA6 745 aa20.54■□□□□ 0.88
LRRC56-201ENST00000270115 FAM200AQ8TCP9 573 aa20.54■□□□□ 0.88
LRRC56-201ENST00000270115 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
LRRC56-201ENST00000270115 SLC4A2P04920 1241 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 LMOD3Q0VAK6 560 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 TRIM5Q9C035 493 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 LRRCC1Q9C099 1032 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
LRRC56-201ENST00000270115 AGLP35573 1532 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 TMEM131LA2VDJ0 1609 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 CD163L1Q9NR16 1453 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 SYCP1Q15431 976 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 KRT222Q8N1A0 295 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 ST7Q9NRC1 585 aa20.53■□□□□ 0.88
LRRC56-201ENST00000270115 ZSCAN25Q6NSZ9 544 aa20.52■□□□□ 0.88
LRRC56-201ENST00000270115 ATP6V1DQ9Y5K8 247 aa20.52■□□□□ 0.88
LRRC56-201ENST00000270115 CCDC66A2RUB6 948 aa20.52■□□□□ 0.88
LRRC56-201ENST00000270115 VPS37CA5D8V6 355 aaPredicted RBP20.52■□□□□ 0.88
LRRC56-201ENST00000270115 IL13P35225 146 aa20.52■□□□□ 0.88
LRRC56-201ENST00000270115 RUFY3Q7L099 469 aa20.52■□□□□ 0.88
LRRC56-201ENST00000270115 MRVI1Q9Y6F6 885 aa20.52■□□□□ 0.88
LRRC56-201ENST00000270115 HSPA4P34932 840 aa20.51■□□□□ 0.87
LRRC56-201ENST00000270115 KMT5BQ4FZB7 885 aa20.51■□□□□ 0.87
LRRC56-201ENST00000270115 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
LRRC56-201ENST00000270115 LARGE1O95461 756 aa20.51■□□□□ 0.87
LRRC56-201ENST00000270115 TYRO3Q06418 890 aa20.51■□□□□ 0.87
LRRC56-201ENST00000270115 CCDC83Q8IWF9 413 aa20.51■□□□□ 0.87
LRRC56-201ENST00000270115 PAXBP1Q9Y5B6 917 aa20.51■□□□□ 0.87
LRRC56-201ENST00000270115 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.51■□□□□ 0.87
LRRC56-201ENST00000270115 ZFYVE9O95405 1425 aa20.51■□□□□ 0.87
LRRC56-201ENST00000270115 SALL3Q9BXA9 1300 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 NPHP1O15259 732 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 GJB2P29033 226 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
LRRC56-201ENST00000270115 TIGD1Q96MW7 591 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 CDK19Q9BWU1 502 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 MAP3K11Q16584 847 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 ANO6Q4KMQ2 910 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 CEP135Q66GS9 1140 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 MCM10Q7L590 875 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 G2E3Q7L622 706 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 IPO4Q8TEX9 1081 aaKnown RBP20.5■□□□□ 0.87
LRRC56-201ENST00000270115 CBX8Q9HC52 389 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
LRRC56-201ENST00000270115 LIG1P18858 919 aa20.49■□□□□ 0.87
LRRC56-201ENST00000270115 RASEFQ8IZ41 740 aa20.49■□□□□ 0.87
LRRC56-201ENST00000270115 CACTINQ8WUQ7 758 aaKnown RBP20.49■□□□□ 0.87
LRRC56-201ENST00000270115 ZRANB1Q9UGI0 708 aa20.49■□□□□ 0.87
LRRC56-201ENST00000270115 ZNF215Q9UL58 517 aaPredicted RBP20.49■□□□□ 0.87
LRRC56-201ENST00000270115 LIMCH1Q9UPQ0 1083 aa20.49■□□□□ 0.87
LRRC56-201ENST00000270115 SNX14Q9Y5W7 946 aa20.49■□□□□ 0.87
LRRC56-201ENST00000270115 CEBPAP49715 358 aaPredicted RBP20.49■□□□□ 0.87
LRRC56-201ENST00000270115 FAM173BQ6P4H8 233 aa20.49■□□□□ 0.87
LRRC56-201ENST00000270115 WAPLQ7Z5K2 1190 aa20.49■□□□□ 0.87
LRRC56-201ENST00000270115 MIS18AQ9NYP9 233 aa20.49■□□□□ 0.87
LRRC56-201ENST00000270115 PNMA6EA0A0J9YXQ4 647 aa20.48■□□□□ 0.87
LRRC56-201ENST00000270115 NUP62CLQ9H1M0 184 aa20.48■□□□□ 0.87
LRRC56-201ENST00000270115 IL1RAPL2Q9NP60 686 aa20.48■□□□□ 0.87
LRRC56-201ENST00000270115 MTMR6Q9Y217 621 aa20.48■□□□□ 0.87
LRRC56-201ENST00000270115 FERMT3Q86UX7 667 aa20.48■□□□□ 0.87
LRRC56-201ENST00000270115 ZNF75DP51815 510 aa20.47■□□□□ 0.87
LRRC56-201ENST00000270115 RRS1Q15050 365 aaKnown RBP20.47■□□□□ 0.87
LRRC56-201ENST00000270115 PTPRCP08575 1304 aa20.47■□□□□ 0.87
LRRC56-201ENST00000270115 USP27XA6NNY8 438 aa20.47■□□□□ 0.87
LRRC56-201ENST00000270115 ZNF397Q8NF99 534 aaPredicted RBP20.47■□□□□ 0.87
LRRC56-201ENST00000270115 TTC14Q96N46 770 aa20.47■□□□□ 0.87
LRRC56-201ENST00000270115 CDC42BPGQ6DT37 1551 aa20.47■□□□□ 0.87
LRRC56-201ENST00000270115 GNAI2P04899 355 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 CCDC144BQ3MJ40 725 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 NUTM1Q86Y26 1132 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 DDX54Q8TDD1 881 aaKnown RBP20.46■□□□□ 0.87
LRRC56-201ENST00000270115 ANKRD26Q9UPS8 1709 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 CLIP2Q9UDT6 1046 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 KIAA0232Q92628 1395 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 SSH2Q76I76 1423 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 ARID5BQ14865 1188 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 ELF2Q15723 593 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 FBXO38Q6PIJ6 1188 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 TTC6Q86TZ1 520 aa20.46■□□□□ 0.87
LRRC56-201ENST00000270115 CASTP20810 708 aaKnown RBP20.45■□□□□ 0.86
LRRC56-201ENST00000270115 TNMDQ9H2S6 317 aa20.45■□□□□ 0.86
LRRC56-201ENST00000270115 DACT1Q9NYF0 836 aa20.44■□□□□ 0.86
LRRC56-201ENST00000270115 YTHDC2Q9H6S0 1430 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms