RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 ARFGAP3Q9NP61 516 aa9.22□□□□□ -0.93
CLTC-201ENST00000269122 PAXBP1Q9Y5B6 917 aa9.22□□□□□ -0.93
CLTC-201ENST00000269122 BAZ1AQ9NRL2 1556 aaPredicted RBP9.22□□□□□ -0.93
CLTC-201ENST00000269122 HSF2BPO75031 334 aa9.22□□□□□ -0.93
CLTC-201ENST00000269122 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
CLTC-201ENST00000269122 APBB1IPQ7Z5R6 666 aaPredicted RBP9.22□□□□□ -0.93
CLTC-201ENST00000269122 MYO1BO43795 1136 aa9.22□□□□□ -0.93
CLTC-201ENST00000269122 SMC1AQ14683 1233 aaKnown RBP9.22□□□□□ -0.93
CLTC-201ENST00000269122 USP48Q86UV5 1035 aa9.22□□□□□ -0.93
CLTC-201ENST00000269122 NECAB1Q8N987 351 aa9.22□□□□□ -0.93
CLTC-201ENST00000269122 CNNM3Q8NE01 707 aa9.21□□□□□ -0.93
CLTC-201ENST00000269122 SKILP12757 684 aa9.21□□□□□ -0.93
CLTC-201ENST00000269122 MMRN2Q9H8L6 949 aa9.21□□□□□ -0.93
CLTC-201ENST00000269122 PPP6R1Q9UPN7 881 aa9.21□□□□□ -0.93
CLTC-201ENST00000269122 NACADO15069 1562 aa9.21□□□□□ -0.93
CLTC-201ENST00000269122 CHMP4BP1P59074 171 aa9.21□□□□□ -0.93
CLTC-201ENST00000269122 PDIA4P13667 645 aaKnown RBP9.21□□□□□ -0.94
CLTC-201ENST00000269122 HSPA4P34932 840 aa9.21□□□□□ -0.94
CLTC-201ENST00000269122 NOP2P46087 812 aaKnown RBP9.21□□□□□ -0.94
CLTC-201ENST00000269122 CCDC158Q5M9N0 1113 aa9.21□□□□□ -0.94
CLTC-201ENST00000269122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.21□□□□□ -0.945e-7■■□□□ 11.5
CLTC-201ENST00000269122 KIF2AO00139 706 aaPredicted RBP9.2□□□□□ -0.94
CLTC-201ENST00000269122 AAMPQ13685 434 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 RRS1Q15050 365 aaKnown RBP9.2□□□□□ -0.94
CLTC-201ENST00000269122 SULT6B1Q6IMI4 303 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 HDGFL1Q5TGJ6 251 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 BICDL1Q6ZP65 573 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 RAPGEF4Q8WZA2 1011 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
CLTC-201ENST00000269122 IMMTQ16891 758 aaKnown RBP9.2□□□□□ -0.94
CLTC-201ENST00000269122 ABTB2Q8N961 1025 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 RBM5P52756 815 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLTC-201ENST00000269122 CCDC6Q16204 474 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 RASSF4Q9H2L5 321 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 F6X3S4 739 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 DNAJC25Q9H1X3 360 aa9.2□□□□□ -0.94
CLTC-201ENST00000269122 STX6O43752 255 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 PAFAH1B1P43034 410 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 SLFN5Q08AF3 891 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 STX1AQ16623 288 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 SYT10Q6XYQ8 523 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 FRMD3A2A2Y4 597 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 OTUD6BQ8N6M0 293 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 UBAC1Q9BSL1 405 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 FLIIQ13045 1269 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 GBP6Q6ZN66 633 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 FAM170AA1A519 330 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 SEC24BO95487 1268 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 SELENOSQ9BQE4 189 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 LRRC2Q9BYS8 371 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 GCOM1H8Y6P7 765 aaPredicted RBP9.19□□□□□ -0.94
CLTC-201ENST00000269122 RAB11FIP3O75154 756 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 MYZAPP0CAP1 466 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 UBASH3AP57075 661 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 LZTFL1Q9NQ48 299 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 TCEANC2Q96MN5 208 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 ZKSCAN5Q9Y2L8 839 aa9.19□□□□□ -0.94
CLTC-201ENST00000269122 MCM3P25205 808 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 NLRP6P59044 892 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 AOPEPQ8N6M6 819 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 FBF1Q8TES7 1133 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 C8orf76Q96K31 380 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 IDH1O75874 414 aaKnown RBP9.18□□□□□ -0.94
CLTC-201ENST00000269122 SMAP1Q8IYB5 467 aaPredicted RBP9.18□□□□□ -0.94
CLTC-201ENST00000269122 TBC1D32Q96NH3 1257 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 CCDC8Q9H0W5 538 aaPredicted RBP9.18□□□□□ -0.94
CLTC-201ENST00000269122 SLC3A2P08195 630 aaKnown RBP9.18□□□□□ -0.94
CLTC-201ENST00000269122 MXRA7P84157 204 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 NOL7Q9UMY1 257 aaKnown RBP9.18□□□□□ -0.94
CLTC-201ENST00000269122 CFAP70Q5T0N1 1121 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 ERC1Q8IUD2 1116 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 MINDY4BA8MYZ0 360 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 IVLP07476 585 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 ANAPC15P60006 121 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 ZSCAN31Q96LW9 406 aaPredicted RBP9.18□□□□□ -0.94
CLTC-201ENST00000269122 A0A1W2PRG0 241 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 VGFO15240 615 aaPredicted RBP9.18□□□□□ -0.94
CLTC-201ENST00000269122 NEBLO76041 1014 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 KLHL40Q2TBA0 621 aa9.18□□□□□ -0.94
CLTC-201ENST00000269122 RIOK3O14730 519 aaKnown RBP9.17□□□□□ -0.94
CLTC-201ENST00000269122 MX1P20591 662 aa9.17□□□□□ -0.94
CLTC-201ENST00000269122 IFT81Q8WYA0 676 aa9.17□□□□□ -0.94
CLTC-201ENST00000269122 AFMP43652 599 aa9.17□□□□□ -0.94
CLTC-201ENST00000269122 UBE2HP62256 183 aa9.17□□□□□ -0.94
CLTC-201ENST00000269122 MCM10Q7L590 875 aa9.17□□□□□ -0.94
CLTC-201ENST00000269122 CEP112Q8N8E3 955 aa9.17□□□□□ -0.94
CLTC-201ENST00000269122 SSH1Q8WYL5 1049 aa9.17□□□□□ -0.94
CLTC-201ENST00000269122 CCT4P50991 539 aaKnown RBP9.17□□□□□ -0.94
CLTC-201ENST00000269122 ARID5AQ03989 594 aa9.17□□□□□ -0.94
CLTC-201ENST00000269122 LARP1Q6PKG0 1096 aaKnown RBP9.17□□□□□ -0.94
CLTC-201ENST00000269122 CCDC114Q96M63 670 aa9.17□□□□□ -0.94
CLTC-201ENST00000269122 DNM1Q05193 864 aaKnown RBP9.17□□□□□ -0.94
CLTC-201ENST00000269122 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.17□□□□□ -0.944e-7■■□□□ 14.5
CLTC-201ENST00000269122 GPRASP1Q5JY77 1395 aa9.16□□□□□ -0.94
CLTC-201ENST00000269122 PDS5BQ9NTI5 1447 aa9.16□□□□□ -0.94
CLTC-201ENST00000269122 MYCNP04198 464 aaPredicted RBP9.16□□□□□ -0.94
CLTC-201ENST00000269122 MCM5P33992 734 aa9.16□□□□□ -0.94
CLTC-201ENST00000269122 GSDMDP57764 484 aa9.16□□□□□ -0.94
CLTC-201ENST00000269122 YEATS4O95619 227 aa9.16□□□□□ -0.94
CLTC-201ENST00000269122 SYT1P21579 422 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms