RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 ADRA2BP18089 450 aa16.54■□□□□ 0.24
SGCE-201ENST00000265735 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
SGCE-201ENST00000265735 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
SGCE-201ENST00000265735 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
SGCE-201ENST00000265735 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
SGCE-201ENST00000265735 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
SGCE-201ENST00000265735 TRAPPC3LQ5T215 181 aa16.53■□□□□ 0.24
SGCE-201ENST00000265735 CCDC87Q9NVE4 849 aa16.53■□□□□ 0.24
SGCE-201ENST00000265735 C4AP0C0L4 1744 aa16.52■□□□□ 0.24
SGCE-201ENST00000265735 NEUROD2Q15784 382 aa16.52■□□□□ 0.23
SGCE-201ENST00000265735 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.23
SGCE-201ENST00000265735 MIS18AQ9NYP9 233 aa16.52■□□□□ 0.23
SGCE-201ENST00000265735 APAF1O14727 1248 aa16.51■□□□□ 0.23
SGCE-201ENST00000265735 STARD3NLO95772 234 aa16.51■□□□□ 0.23
SGCE-201ENST00000265735 BABAM1Q9NWV8 329 aa16.51■□□□□ 0.23
SGCE-201ENST00000265735 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
SGCE-201ENST00000265735 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
SGCE-201ENST00000265735 ARXQ96QS3 562 aa16.5■□□□□ 0.23
SGCE-201ENST00000265735 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
SGCE-201ENST00000265735 ZBTB1Q9Y2K1 713 aa16.5■□□□□ 0.23
SGCE-201ENST00000265735 PRAMEF22A3QJZ6 481 aa16.48■□□□□ 0.23
SGCE-201ENST00000265735 POLD1P28340 1107 aa16.48■□□□□ 0.23
SGCE-201ENST00000265735 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
SGCE-201ENST00000265735 FKBP8Q14318 412 aa16.48■□□□□ 0.23
SGCE-201ENST00000265735 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
SGCE-201ENST00000265735 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
SGCE-201ENST00000265735 RFC4P35249 363 aa16.47■□□□□ 0.23
SGCE-201ENST00000265735 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
SGCE-201ENST00000265735 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
SGCE-201ENST00000265735 GIGYF1O75420 1035 aaPredicted RBP16.46■□□□□ 0.23
SGCE-201ENST00000265735 GYS1P13807 737 aa16.46■□□□□ 0.23
SGCE-201ENST00000265735 USP42Q9H9J4 1324 aaKnown RBP16.46■□□□□ 0.23
SGCE-201ENST00000265735 CHL1O00533 1208 aa16.46■□□□□ 0.23
SGCE-201ENST00000265735 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
SGCE-201ENST00000265735 TSPYL4Q9UJ04 414 aa16.46■□□□□ 0.23
SGCE-201ENST00000265735 COL15A1P39059 1388 aa16.45■□□□□ 0.22
SGCE-201ENST00000265735 CANXP27824 592 aaKnown RBP16.45■□□□□ 0.22
SGCE-201ENST00000265735 IL6STP40189 918 aaPredicted RBP16.45■□□□□ 0.22
SGCE-201ENST00000265735 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
SGCE-201ENST00000265735 FHDC1Q9C0D6 1143 aaPredicted RBP16.45■□□□□ 0.22
SGCE-201ENST00000265735 A1BGP04217 495 aa16.44■□□□□ 0.22
SGCE-201ENST00000265735 SYT17Q9BSW7 474 aa16.44■□□□□ 0.22
SGCE-201ENST00000265735 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
SGCE-201ENST00000265735 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
SGCE-201ENST00000265735 SRP68Q9UHB9 627 aaKnown RBP16.43■□□□□ 0.22
SGCE-201ENST00000265735 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
SGCE-201ENST00000265735 ZNF853P0CG23 659 aa16.43■□□□□ 0.22
SGCE-201ENST00000265735 A0A087WZG4 1122 aa16.41■□□□□ 0.22
SGCE-201ENST00000265735 NBPF26B4DH59 902 aa16.41■□□□□ 0.22
SGCE-201ENST00000265735 ZPR1O75312 459 aa16.41■□□□□ 0.22
SGCE-201ENST00000265735 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
SGCE-201ENST00000265735 NBPF10Q6P3W6 841 aaKnown RBP16.41■□□□□ 0.22
SGCE-201ENST00000265735 NBPF15Q8N660 670 aa16.41■□□□□ 0.22
SGCE-201ENST00000265735 MMP10P09238 476 aa16.4■□□□□ 0.22
SGCE-201ENST00000265735 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
SGCE-201ENST00000265735 SCN7AQ01118 1682 aa16.4■□□□□ 0.22
SGCE-201ENST00000265735 TM4SF1P30408 202 aa16.4■□□□□ 0.22
SGCE-201ENST00000265735 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
SGCE-201ENST00000265735 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
SGCE-201ENST00000265735 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
SGCE-201ENST00000265735 WWC1Q8IX03 1113 aa16.39■□□□□ 0.21
SGCE-201ENST00000265735 LAS1LQ9Y4W2 734 aaKnown RBP16.39■□□□□ 0.21
SGCE-201ENST00000265735 KIF13BQ9NQT8 1826 aa16.38■□□□□ 0.21
SGCE-201ENST00000265735 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
SGCE-201ENST00000265735 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
SGCE-201ENST00000265735 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
SGCE-201ENST00000265735 CD2APQ9Y5K6 639 aa16.38■□□□□ 0.21
SGCE-201ENST00000265735 GNAI1P63096 354 aa16.37■□□□□ 0.21
SGCE-201ENST00000265735 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
SGCE-201ENST00000265735 TBC1D2BQ9UPU7 963 aa16.37■□□□□ 0.21
SGCE-201ENST00000265735 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
SGCE-201ENST00000265735 KRT24Q2M2I5 525 aa16.37■□□□□ 0.21
SGCE-201ENST00000265735 SENP3-EIF4A1A0A087X0R7 540 aa16.36■□□□□ 0.21
SGCE-201ENST00000265735 CAMTA2O94983 1202 aa16.36■□□□□ 0.21
SGCE-201ENST00000265735 DDR1Q08345 913 aa16.36■□□□□ 0.21
SGCE-201ENST00000265735 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
SGCE-201ENST00000265735 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
SGCE-201ENST00000265735 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
SGCE-201ENST00000265735 POLRMTO00411 1230 aaKnown RBP16.35■□□□□ 0.21
SGCE-201ENST00000265735 NFIXQ14938 502 aa16.35■□□□□ 0.21
SGCE-201ENST00000265735 PDIA6Q15084 440 aa16.35■□□□□ 0.21
SGCE-201ENST00000265735 LRP10Q7Z4F1 713 aa16.35■□□□□ 0.21
SGCE-201ENST00000265735 NPM2Q86SE8 214 aaKnown RBP16.35■□□□□ 0.21
SGCE-201ENST00000265735 NLGN2Q8NFZ4 835 aa16.35■□□□□ 0.21
SGCE-201ENST00000265735 SALL2Q9Y467 1007 aaPredicted RBP16.35■□□□□ 0.21
SGCE-201ENST00000265735 PARP3Q9Y6F1 533 aa16.35■□□□□ 0.21
SGCE-201ENST00000265735 NRXN2Q9P2S2 1712 aa16.35■□□□□ 0.21
SGCE-201ENST00000265735 RGL2O15211 777 aa16.34■□□□□ 0.21
SGCE-201ENST00000265735 HOXB7P09629 217 aa16.34■□□□□ 0.21
SGCE-201ENST00000265735 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
SGCE-201ENST00000265735 AFDNP55196 1824 aaKnown RBP16.34■□□□□ 0.21
SGCE-201ENST00000265735 IL16Q14005 1332 aa16.34■□□□□ 0.21
SGCE-201ENST00000265735 KIAA1551Q9HCM1 1747 aa16.33■□□□□ 0.21
SGCE-201ENST00000265735 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.21
SGCE-201ENST00000265735 EIF2S2P20042 333 aaKnown RBP16.33■□□□□ 0.2
SGCE-201ENST00000265735 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.2
SGCE-201ENST00000265735 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
SGCE-201ENST00000265735 TBC1D9BQ66K14 1250 aa16.32■□□□□ 0.2
SGCE-201ENST00000265735 DUSP27Q5VZP5 1158 aa16.31■□□□□ 0.2
SGCE-201ENST00000265735 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms