RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 CCDC70Q6NSX1 233 aa19.53■□□□□ 0.72
SCAP-201ENST00000265565 NCKAP5LQ9HCH0 1330 aa19.53■□□□□ 0.72
SCAP-201ENST00000265565 ANAPC15P60006 121 aa19.53■□□□□ 0.72
SCAP-201ENST00000265565 CCDC186Q7Z3E2 898 aa19.53■□□□□ 0.72
SCAP-201ENST00000265565 PRIMPOLQ96LW4 560 aa19.53■□□□□ 0.72
SCAP-201ENST00000265565 ATP8B2P98198 1209 aa19.53■□□□□ 0.72
SCAP-201ENST00000265565 CFAP100Q494V2 611 aa19.53■□□□□ 0.72
SCAP-201ENST00000265565 TTC39AQ5SRH9 613 aa19.53■□□□□ 0.72
SCAP-201ENST00000265565 ANTXR1Q9H6X2 564 aa19.53■□□□□ 0.72
SCAP-201ENST00000265565 ACEP12821 1306 aa19.52■□□□□ 0.72
SCAP-201ENST00000265565 CPA1P15085 419 aa19.52■□□□□ 0.72
SCAP-201ENST00000265565 SFPQP23246 707 aaKnown RBP eCLIP19.52■□□□□ 0.72
SCAP-201ENST00000265565 UBXN4Q92575 508 aa19.52■□□□□ 0.72
SCAP-201ENST00000265565 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.52■□□□□ 0.72
SCAP-201ENST00000265565 HS1BP3Q53T59 392 aa19.52■□□□□ 0.72
SCAP-201ENST00000265565 CHAMP1Q96JM3 812 aa19.52■□□□□ 0.72
SCAP-201ENST00000265565 G2E3Q7L622 706 aa19.52■□□□□ 0.71
SCAP-201ENST00000265565 VPS37DQ86XT2 251 aa19.52■□□□□ 0.71
SCAP-201ENST00000265565 KIF18AQ8NI77 898 aa19.52■□□□□ 0.71
SCAP-201ENST00000265565 DDX19AQ9NUU7 478 aaKnown RBP19.52■□□□□ 0.71
SCAP-201ENST00000265565 MTMR7Q9Y216 660 aa19.52■□□□□ 0.71
SCAP-201ENST00000265565 ADAMTS12P58397 1594 aa19.52■□□□□ 0.71
SCAP-201ENST00000265565 KDM5CP41229 1560 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 CHMLP26374 656 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 BIN1O00499 593 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 RBM33Q96EV2 1170 aaKnown RBP19.51■□□□□ 0.71
SCAP-201ENST00000265565 CEP126Q9P2H0 1117 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 CCP110O43303 1012 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 TATP17735 454 aaPredicted RBP19.51■□□□□ 0.71
SCAP-201ENST00000265565 ZC3H6P61129 1189 aaKnown RBP19.51■□□□□ 0.71
SCAP-201ENST00000265565 PKP1Q13835 747 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 LMBRD1Q9NUN5 540 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 ANO10Q9NW15 660 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 DACT1Q9NYF0 836 aa19.51■□□□□ 0.71
SCAP-201ENST00000265565 NOL7Q9UMY1 257 aaKnown RBP19.51■□□□□ 0.71
SCAP-201ENST00000265565 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
SCAP-201ENST00000265565 EVI5LQ96CN4 794 aa19.5■□□□□ 0.71
SCAP-201ENST00000265565 JARID2Q92833 1246 aaPredicted RBP19.5■□□□□ 0.71
SCAP-201ENST00000265565 F13A1P00488 732 aa19.5■□□□□ 0.71
SCAP-201ENST00000265565 AK2P54819 239 aa19.5■□□□□ 0.71
SCAP-201ENST00000265565 DBF4Q9UBU7 674 aaPredicted RBP19.49■□□□□ 0.71
SCAP-201ENST00000265565 LRRC2Q9BYS8 371 aa19.49■□□□□ 0.71
SCAP-201ENST00000265565 PUS7Q96PZ0 661 aaKnown RBP19.49■□□□□ 0.71
SCAP-201ENST00000265565 MYD88Q99836 296 aa19.49■□□□□ 0.71
SCAP-201ENST00000265565 MAP3K2Q9Y2U5 619 aa19.49■□□□□ 0.71
SCAP-201ENST00000265565 FSIP1Q8NA03 581 aa19.48■□□□□ 0.71
SCAP-201ENST00000265565 IGSF3O75054 1194 aa19.48■□□□□ 0.71
SCAP-201ENST00000265565 CD2BP2O95400 341 aaKnown RBP19.48■□□□□ 0.71
SCAP-201ENST00000265565 SART3Q15020 963 aaKnown RBP19.48■□□□□ 0.71
SCAP-201ENST00000265565 MTHFSDQ2M296 383 aaKnown RBP19.48■□□□□ 0.71
SCAP-201ENST00000265565 ANO6Q4KMQ2 910 aa19.48■□□□□ 0.71
SCAP-201ENST00000265565 TMEM63CQ9P1W3 806 aa19.48■□□□□ 0.71
SCAP-201ENST00000265565 PTPRTO14522 1441 aa19.48■□□□□ 0.71
SCAP-201ENST00000265565 URI1O94763 535 aaPredicted RBP19.47■□□□□ 0.71
SCAP-201ENST00000265565 ZNF445P59923 1031 aa19.47■□□□□ 0.71
SCAP-201ENST00000265565 C17orf53Q8N3J3 647 aaPredicted RBP19.47■□□□□ 0.71
SCAP-201ENST00000265565 RBM8AQ9Y5S9 174 aaKnown RBP19.47■□□□□ 0.71
SCAP-201ENST00000265565 SYT1P21579 422 aa19.47■□□□□ 0.71
SCAP-201ENST00000265565 CABP4P57796 275 aa19.47■□□□□ 0.71
SCAP-201ENST00000265565 FILIP1LQ4L180 1135 aa19.47■□□□□ 0.71
SCAP-201ENST00000265565 CNNM1Q9NRU3 951 aa19.47■□□□□ 0.71
SCAP-201ENST00000265565 CCDC57Q2TAC2 916 aa19.47■□□□□ 0.71
SCAP-201ENST00000265565 VPS53Q5VIR6 699 aa19.47■□□□□ 0.71
SCAP-201ENST00000265565 ISM2Q6H9L7 571 aa19.47■□□□□ 0.71
SCAP-201ENST00000265565 LARP1Q6PKG0 1096 aaKnown RBP19.47■□□□□ 0.71
SCAP-201ENST00000265565 USP19O94966 1318 aa19.46■□□□□ 0.71
SCAP-201ENST00000265565 NAP1L1P55209 391 aaKnown RBP19.46■□□□□ 0.71
SCAP-201ENST00000265565 FAM200AQ8TCP9 573 aa19.46■□□□□ 0.71
SCAP-201ENST00000265565 FSD2A1L4K1 749 aa19.46■□□□□ 0.71
SCAP-201ENST00000265565 PA2G4Q9UQ80 394 aaKnown RBP19.46■□□□□ 0.71
SCAP-201ENST00000265565 GSPT1P15170 499 aaKnown RBP19.46■□□□□ 0.71
SCAP-201ENST00000265565 XBP1P17861 261 aa19.46■□□□□ 0.71
SCAP-201ENST00000265565 CCDC47Q96A33 483 aaKnown RBP19.46■□□□□ 0.71
SCAP-201ENST00000265565 ACBD3Q9H3P7 528 aa19.46■□□□□ 0.71
SCAP-201ENST00000265565 U3KPZ7 1027 aaPredicted RBP19.46■□□□□ 0.71
SCAP-201ENST00000265565 TTC21BQ7Z4L5 1316 aa19.46■□□□□ 0.71
SCAP-201ENST00000265565 THEMISQ8N1K5 641 aaPredicted RBP19.46■□□□□ 0.71
SCAP-201ENST00000265565 INTS4Q96HW7 963 aaKnown RBP19.46■□□□□ 0.71
SCAP-201ENST00000265565 CHPF2Q9P2E5 772 aa19.46■□□□□ 0.71
SCAP-201ENST00000265565 PPFIBP1Q86W92 1011 aa19.45■□□□□ 0.7
SCAP-201ENST00000265565 BRF1Q92994 677 aa19.45■□□□□ 0.7
SCAP-201ENST00000265565 AMOTL2Q9Y2J4 779 aa19.45■□□□□ 0.7
SCAP-201ENST00000265565 NUP133Q8WUM0 1156 aa19.45■□□□□ 0.7
SCAP-201ENST00000265565 CTNNA3Q9UI47 895 aa19.45■□□□□ 0.7
SCAP-201ENST00000265565 SMTNL1A8MU46 457 aa19.45■□□□□ 0.7
SCAP-201ENST00000265565 C8orf76Q96K31 380 aa19.45■□□□□ 0.7
SCAP-201ENST00000265565 DNAJC25Q9H1X3 360 aa19.45■□□□□ 0.7
SCAP-201ENST00000265565 TRERF1Q96PN7 1200 aa19.44■□□□□ 0.7
SCAP-201ENST00000265565 RAB11FIP4Q86YS3 637 aa19.44■□□□□ 0.7
SCAP-201ENST00000265565 CAGE1Q8TC20 777 aa19.44■□□□□ 0.7
SCAP-201ENST00000265565 CGNQ9P2M7 1197 aaKnown RBP19.44■□□□□ 0.7
SCAP-201ENST00000265565 MSH6P52701 1360 aa19.44■□□□□ 0.7
SCAP-201ENST00000265565 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
SCAP-201ENST00000265565 GADD45BO75293 160 aaPredicted RBP19.44■□□□□ 0.7
SCAP-201ENST00000265565 POLR3DP05423 398 aaPredicted RBP19.44■□□□□ 0.7
SCAP-201ENST00000265565 CCAR1Q8IX12 1150 aaKnown RBP19.44■□□□□ 0.7
SCAP-201ENST00000265565 NEK1Q96PY6 1258 aa19.44■□□□□ 0.7
SCAP-201ENST00000265565 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.44■□□□□ 0.79e-6■■□□□ 14.3
SCAP-201ENST00000265565 V9GYY5 206 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms