RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 DNAJC21Q5F1R6 531 aaKnown RBP20.83■□□□□ 0.93
ITGA6-201ENST00000264107 RPAP2Q8IXW5 612 aaPredicted RBP20.83■□□□□ 0.92
ITGA6-201ENST00000264107 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.92
ITGA6-201ENST00000264107 KRT32Q14532 448 aa20.83■□□□□ 0.92
ITGA6-201ENST00000264107 RARSP54136 660 aaKnown RBP20.82■□□□□ 0.92
ITGA6-201ENST00000264107 ZSCAN26Q16670 478 aa20.82■□□□□ 0.92
ITGA6-201ENST00000264107 FGD6Q6ZV73 1430 aa20.82■□□□□ 0.92
ITGA6-201ENST00000264107 RAD54L2Q9Y4B4 1467 aa20.82■□□□□ 0.92
ITGA6-201ENST00000264107 DHX29Q7Z478 1369 aaKnown RBP20.82■□□□□ 0.92
ITGA6-201ENST00000264107 NKTRP30414 1462 aaKnown RBP20.82■□□□□ 0.92
ITGA6-201ENST00000264107 ZEB2O60315 1214 aa20.82■□□□□ 0.92
ITGA6-201ENST00000264107 ZNF622Q969S3 477 aaKnown RBP eCLIP20.82■□□□□ 0.92
ITGA6-201ENST00000264107 TCEAL9Q9UHQ7 104 aa20.82■□□□□ 0.92
ITGA6-201ENST00000264107 SLC3A2P08195 630 aaKnown RBP20.82■□□□□ 0.92
ITGA6-201ENST00000264107 C1orf141Q5JVX7 400 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 TRIM22Q8IYM9 498 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 C17orf53Q8N3J3 647 aaPredicted RBP20.81■□□□□ 0.92
ITGA6-201ENST00000264107 FAM76AQ8TAV0 307 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 JADE2Q9NQC1 790 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 CCDC160A6NGH7 325 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 CKAP4Q07065 602 aaKnown RBP20.81■□□□□ 0.92
ITGA6-201ENST00000264107 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 CCDC69A6NI79 296 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 GJB2P29033 226 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 ELF2Q15723 593 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 SIL1Q9H173 461 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 NGDNQ8NEJ9 315 aaKnown RBP20.81■□□□□ 0.92
ITGA6-201ENST00000264107 CNPY2Q9Y2B0 182 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 CCT4P50991 539 aaKnown RBP20.81■□□□□ 0.92
ITGA6-201ENST00000264107 ANKS4BQ8N8V4 417 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 GGNBP2Q9H3C7 697 aa20.81■□□□□ 0.92
ITGA6-201ENST00000264107 AP1ARQ63HQ0 302 aa20.8■□□□□ 0.92
ITGA6-201ENST00000264107 C6orf163Q5TEZ5 329 aa20.8■□□□□ 0.92
ITGA6-201ENST00000264107 RAD21O60216 631 aa20.79■□□□□ 0.92
ITGA6-201ENST00000264107 KIF4AO95239 1232 aa20.79■□□□□ 0.92
ITGA6-201ENST00000264107 SEPT6Q14141 434 aa20.79■□□□□ 0.92
ITGA6-201ENST00000264107 DAAM2Q86T65 1068 aa20.79■□□□□ 0.92
ITGA6-201ENST00000264107 B4GALNT4Q76KP1 1039 aa20.79■□□□□ 0.92
ITGA6-201ENST00000264107 NSRP1Q9H0G5 558 aaKnown RBP20.79■□□□□ 0.92
ITGA6-201ENST00000264107 EVCP57679 992 aa20.79■□□□□ 0.92
ITGA6-201ENST00000264107 PRPF40BQ6NWY9 871 aaKnown RBP20.79■□□□□ 0.92
ITGA6-201ENST00000264107 TMX3Q96JJ7 454 aa20.79■□□□□ 0.92
ITGA6-201ENST00000264107 CCDC43Q96MW1 224 aaKnown RBP20.79■□□□□ 0.92
ITGA6-201ENST00000264107 ALS2CR12Q96Q35 445 aa20.79■□□□□ 0.92
ITGA6-201ENST00000264107 ZSCAN22P10073 491 aaPredicted RBP20.79■□□□□ 0.92
ITGA6-201ENST00000264107 CCDC30Q5VVM6 783 aa20.79■□□□□ 0.92
ITGA6-201ENST00000264107 ZNF500O60304 480 aaPredicted RBP20.78■□□□□ 0.92
ITGA6-201ENST00000264107 AFAP1L1Q8TED9 768 aa20.78■□□□□ 0.92
ITGA6-201ENST00000264107 TUBB4BP68371 445 aa20.78■□□□□ 0.92
ITGA6-201ENST00000264107 SMARCA5O60264 1052 aaPredicted RBP20.78■□□□□ 0.92
ITGA6-201ENST00000264107 CDKL5O76039 1030 aa20.78■□□□□ 0.92
ITGA6-201ENST00000264107 SLC4A2P04920 1241 aa20.78■□□□□ 0.92
ITGA6-201ENST00000264107 PRKAR2BP31323 418 aa20.78■□□□□ 0.92
ITGA6-201ENST00000264107 GCKP35557 465 aa20.78■□□□□ 0.92
ITGA6-201ENST00000264107 LARP6Q9BRS8 491 aaKnown RBP20.78■□□□□ 0.92
ITGA6-201ENST00000264107 DNAJC25Q9H1X3 360 aa20.78■□□□□ 0.92
ITGA6-201ENST00000264107 IL1RAPL2Q9NP60 686 aa20.77■□□□□ 0.92
ITGA6-201ENST00000264107 SEPT11Q9NVA2 429 aaKnown RBP20.77■□□□□ 0.92
ITGA6-201ENST00000264107 SCAPERQ9BY12 1400 aa20.77■□□□□ 0.92
ITGA6-201ENST00000264107 GAS2L2Q8NHY3 880 aa20.77■□□□□ 0.92
ITGA6-201ENST00000264107 UBASH3AP57075 661 aa20.77■□□□□ 0.92
ITGA6-201ENST00000264107 PIP4K2BP78356 416 aa20.77■□□□□ 0.92
ITGA6-201ENST00000264107 KRT18P05783 430 aaKnown RBP20.76■□□□□ 0.91
ITGA6-201ENST00000264107 SYT1P21579 422 aa20.76■□□□□ 0.91
ITGA6-201ENST00000264107 SWAP70Q9UH65 585 aa20.76■□□□□ 0.91
ITGA6-201ENST00000264107 MINK1Q8N4C8 1332 aaPredicted RBP20.76■□□□□ 0.91
ITGA6-201ENST00000264107 OAS2P29728 719 aaKnown RBP20.76■□□□□ 0.91
ITGA6-201ENST00000264107 CTCFLQ8NI51 663 aaPredicted RBP20.76■□□□□ 0.91
ITGA6-201ENST00000264107 KIF21BO75037 1637 aa20.76■□□□□ 0.91
ITGA6-201ENST00000264107 RHOXF2BP0C7M4 288 aa20.76■□□□□ 0.91
ITGA6-201ENST00000264107 DUSP27Q5VZP5 1158 aa20.76■□□□□ 0.91
ITGA6-201ENST00000264107 RHOXF2Q9BQY4 288 aa20.76■□□□□ 0.91
ITGA6-201ENST00000264107 PUF60Q9UHX1 559 aaKnown RBP20.76■□□□□ 0.91
ITGA6-201ENST00000264107 NCAPD3P42695 1498 aa20.76■□□□□ 0.91
ITGA6-201ENST00000264107 EHBP1Q8NDI1 1231 aa20.75■□□□□ 0.91
ITGA6-201ENST00000264107 MKRN1Q9UHC7 482 aaKnown RBP20.75■□□□□ 0.91
ITGA6-201ENST00000264107 MRVI1Q9Y6F6 885 aa20.75■□□□□ 0.91
ITGA6-201ENST00000264107 TYRO3Q06418 890 aa20.75■□□□□ 0.91
ITGA6-201ENST00000264107 CTAGE9A4FU28 777 aa20.75■□□□□ 0.91
ITGA6-201ENST00000264107 PPP2R3AQ06190 1150 aa20.75■□□□□ 0.91
ITGA6-201ENST00000264107 RIC3Q7Z5B4 369 aa20.74■□□□□ 0.91
ITGA6-201ENST00000264107 DDX54Q8TDD1 881 aaKnown RBP20.74■□□□□ 0.91
ITGA6-201ENST00000264107 NUTM2FA1L443 756 aa20.74■□□□□ 0.91
ITGA6-201ENST00000264107 FKBP15Q5T1M5 1219 aa20.74■□□□□ 0.91
ITGA6-201ENST00000264107 BUB1BO60566 1050 aaPredicted RBP20.74■□□□□ 0.91
ITGA6-201ENST00000264107 CCDC50Q8IVM0 306 aa20.74■□□□□ 0.91
ITGA6-201ENST00000264107 CNNM3Q8NE01 707 aa20.74■□□□□ 0.91
ITGA6-201ENST00000264107 TUBBP07437 444 aa20.74■□□□□ 0.91
ITGA6-201ENST00000264107 GSTTP1A0A1W2PQM5 241 aa20.73■□□□□ 0.91
ITGA6-201ENST00000264107 CPLX4Q7Z7G2 160 aa20.73■□□□□ 0.91
ITGA6-201ENST00000264107 MYOM3Q5VTT5 1437 aa20.73■□□□□ 0.91
ITGA6-201ENST00000264107 ISM2Q6H9L7 571 aa20.73■□□□□ 0.91
ITGA6-201ENST00000264107 RAB11FIP3O75154 756 aa20.73■□□□□ 0.91
ITGA6-201ENST00000264107 ZNF445P59923 1031 aa20.73■□□□□ 0.91
ITGA6-201ENST00000264107 GUCY1B3Q02153 619 aa20.72■□□□□ 0.91
ITGA6-201ENST00000264107 EXOC6BQ9Y2D4 811 aa20.72■□□□□ 0.91
ITGA6-201ENST00000264107 NDUFAB1O14561 156 aa20.72■□□□□ 0.91
ITGA6-201ENST00000264107 NEK11Q8NG66 645 aa20.72■□□□□ 0.91
ITGA6-201ENST00000264107 AIMP1Q12904 312 aaKnown RBP20.72■□□□□ 0.91
ITGA6-201ENST00000264107 AOPEPQ8N6M6 819 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms