RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CWF19L2Q2TBE0 894 aaKnown RBP19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 RNF17Q9BXT8 1623 aaKnown RBP19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 RAB11FIP3O75154 756 aa19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 ATP8B2P98198 1209 aa19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 UBE2Q2Q8WVN8 375 aa19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 ARAP3Q8WWN8 1544 aa19.34■□□□□ 0.69
PDZRN3-201ENST00000263666 METP08581 1390 aa19.34■□□□□ 0.69
PDZRN3-201ENST00000263666 NBPF7P0C2Y1 421 aaPredicted RBP19.34■□□□□ 0.69
PDZRN3-201ENST00000263666 GNL2Q13823 731 aaKnown RBP19.34■□□□□ 0.69
PDZRN3-201ENST00000263666 STK11IPQ8N1F8 1099 aa19.34■□□□□ 0.69
PDZRN3-201ENST00000263666 GOLGA6L6A8MZA4 724 aa19.34■□□□□ 0.69
PDZRN3-201ENST00000263666 GJB2P29033 226 aa19.34■□□□□ 0.69
PDZRN3-201ENST00000263666 LRRC2Q9BYS8 371 aa19.34■□□□□ 0.69
PDZRN3-201ENST00000263666 GOLGA6L19H0YKK7 550 aa19.33■□□□□ 0.69
PDZRN3-201ENST00000263666 IQGAP1P46940 1657 aa19.33■□□□□ 0.69
PDZRN3-201ENST00000263666 STX6O43752 255 aa19.33■□□□□ 0.69
PDZRN3-201ENST00000263666 DNM1Q05193 864 aaKnown RBP19.33■□□□□ 0.69
PDZRN3-201ENST00000263666 ADCY5O95622 1261 aa19.33■□□□□ 0.68
PDZRN3-201ENST00000263666 TMEM2Q9UHN6 1383 aa19.33■□□□□ 0.68
PDZRN3-201ENST00000263666 AK2P54819 239 aa19.33■□□□□ 0.68
PDZRN3-201ENST00000263666 MAP3K2Q9Y2U5 619 aa19.33■□□□□ 0.68
PDZRN3-201ENST00000263666 GUCY1B3Q02153 619 aa19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 TAF7LQ5H9L4 462 aa19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 DDX58O95786 925 aaKnown RBP19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 ZNF853P0CG23 659 aa19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 PLEKHO1Q53GL0 409 aaPredicted RBP19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 RNF20Q5VTR2 975 aa19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 KLHDC4Q8TBB5 520 aa19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 ZMYND15Q9H091 742 aa19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 LIMCH1Q9UPQ0 1083 aa19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 NUTM2BA6NNL0 878 aaPredicted RBP19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 NUTM2EB1AL46 878 aaPredicted RBP19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 NUTM2AQ8IVF1 878 aaPredicted RBP19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 LAMC1P11047 1609 aa19.32■□□□□ 0.68
PDZRN3-201ENST00000263666 TULP4Q9NRJ4 1543 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 PRR36Q9H6K5 1346 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 SLC39A6Q13433 755 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 TOM1L2Q6ZVM7 507 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 KRT28Q7Z3Y7 464 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 LGR6Q9HBX8 967 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 NDUFB9Q9Y6M9 179 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 KCNQ3O43525 872 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 BLOC1S2Q6QNY1 142 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 SASS6Q6UVJ0 657 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 PKNOX2Q96KN3 472 aa19.31■□□□□ 0.68
PDZRN3-201ENST00000263666 ABCA9Q8IUA7 1624 aa19.3■□□□□ 0.68
PDZRN3-201ENST00000263666 KCNH5Q8NCM2 988 aa19.3■□□□□ 0.68
PDZRN3-201ENST00000263666 TOMM22Q9NS69 142 aa19.3■□□□□ 0.68
PDZRN3-201ENST00000263666 GLRX3O76003 335 aaKnown RBP19.3■□□□□ 0.68
PDZRN3-201ENST00000263666 CEP152O94986 1710 aa19.29■□□□□ 0.68
PDZRN3-201ENST00000263666 TNMDQ9H2S6 317 aa19.29■□□□□ 0.68
PDZRN3-201ENST00000263666 QRICH2Q9H0J4 1663 aa19.29■□□□□ 0.68
PDZRN3-201ENST00000263666 EDC4Q6P2E9 1401 aaKnown RBP19.28■□□□□ 0.68
PDZRN3-201ENST00000263666 ATP5J2-PTCD1G3V325 749 aa19.28■□□□□ 0.68
PDZRN3-201ENST00000263666 PTCD1O75127 700 aaKnown RBP19.28■□□□□ 0.68
PDZRN3-201ENST00000263666 KRT85P78386 507 aa19.28■□□□□ 0.68
PDZRN3-201ENST00000263666 HDAC5Q9UQL6 1122 aa19.28■□□□□ 0.68
PDZRN3-201ENST00000263666 ZKSCAN5Q9Y2L8 839 aa19.28■□□□□ 0.68
PDZRN3-201ENST00000263666 CADPS2Q86UW7 1296 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 RIMBP3CA6NJZ7 1639 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 RIMBP3BA6NNM3 1639 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 RIMBP3Q9UFD9 1639 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 NLRP1Q9C000 1473 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 TATP17735 454 aaPredicted RBP19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 CCDC183Q5T5S1 534 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 RAB11FIP4Q86YS3 637 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 DNAJC5Q9H3Z4 198 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 IQSEC2Q5JU85 1478 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 SYT1P21579 422 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 SPATA32Q96LK8 384 aa19.27■□□□□ 0.68
PDZRN3-201ENST00000263666 GLI2P10070 1586 aa19.27■□□□□ 0.67
PDZRN3-201ENST00000263666 USP44Q9H0E7 712 aa19.27■□□□□ 0.67
PDZRN3-201ENST00000263666 FAM135BQ49AJ0 1406 aa19.27■□□□□ 0.67
PDZRN3-201ENST00000263666 WASHC4Q2M389 1173 aa19.26■□□□□ 0.67
PDZRN3-201ENST00000263666 CCDC192P0DO97 292 aa19.26■□□□□ 0.67
PDZRN3-201ENST00000263666 ZSCAN22P10073 491 aaPredicted RBP19.26■□□□□ 0.67
PDZRN3-201ENST00000263666 FILIP1Q7Z7B0 1213 aa19.26■□□□□ 0.67
PDZRN3-201ENST00000263666 IL17REQ8NFR9 667 aa19.26■□□□□ 0.67
PDZRN3-201ENST00000263666 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDZRN3-201ENST00000263666 MYD88Q99836 296 aa19.25■□□□□ 0.67
PDZRN3-201ENST00000263666 NUP62CLQ9H1M0 184 aa19.25■□□□□ 0.67
PDZRN3-201ENST00000263666 ECHDC1Q9NTX5 307 aa19.25■□□□□ 0.67
PDZRN3-201ENST00000263666 AK9Q5TCS8 1911 aa19.25■□□□□ 0.67
PDZRN3-201ENST00000263666 PPRC1Q5VV67 1664 aaKnown RBP19.25■□□□□ 0.67
PDZRN3-201ENST00000263666 ABCC3O15438 1527 aa19.25■□□□□ 0.67
PDZRN3-201ENST00000263666 HTATSF1O43719 755 aaKnown RBP19.25■□□□□ 0.67
PDZRN3-201ENST00000263666 EDC3Q96F86 508 aaKnown RBP19.25■□□□□ 0.67
PDZRN3-201ENST00000263666 OFD1O75665 1012 aa19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 APPP05067 770 aa19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 LRRC7Q96NW7 1537 aa19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 PSMA5P28066 241 aa19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 ZNF445P59923 1031 aa19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 CCT2P78371 535 aaKnown RBP19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 CBX1P83916 185 aa19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 SOS1Q07889 1333 aaPredicted RBP19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 SDF4Q9BRK5 362 aa19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 PIK3R4Q99570 1358 aa19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 CREBRFQ8IUR6 639 aa19.24■□□□□ 0.67
PDZRN3-201ENST00000263666 RASEFQ8IZ41 740 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms