RNA–Protein interactions for RNA: ENST00000261944.9

CDHR2-201, Transcript of cadherin related family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR2, Length 4,068 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-201ENST00000261944 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
CDHR2-201ENST00000261944 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
CDHR2-201ENST00000261944 NIP7Q9Y221 180 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDHR2-201ENST00000261944 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
CDHR2-201ENST00000261944 FBXW7Q969H0 707 aa12.7□□□□□ -0.38
CDHR2-201ENST00000261944 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
CDHR2-201ENST00000261944 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
CDHR2-201ENST00000261944 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
CDHR2-201ENST00000261944 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
CDHR2-201ENST00000261944 GZF1Q9H116 711 aaPredicted RBP12.69□□□□□ -0.38
CDHR2-201ENST00000261944 HYPKQ9NX55 129 aa12.69□□□□□ -0.38
CDHR2-201ENST00000261944 HDAC5Q9UQL6 1122 aa12.69□□□□□ -0.38
CDHR2-201ENST00000261944 CDK12Q9NYV4 1490 aaPredicted RBP12.69□□□□□ -0.38
CDHR2-201ENST00000261944 DCAF8L1A6NGE4 600 aa12.69□□□□□ -0.38
CDHR2-201ENST00000261944 PDE4AP27815 886 aa12.69□□□□□ -0.38
CDHR2-201ENST00000261944 KCNJ4P48050 445 aa12.69□□□□□ -0.38
CDHR2-201ENST00000261944 SETDB2Q96T68 719 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 CCDC87Q9NVE4 849 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 CHL1O00533 1208 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 TXNRD1Q16881 649 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 HSCBQ8IWL3 235 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 SIL1Q9H173 461 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 ROBO1Q9Y6N7 1651 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 A0A087WZG4 1122 aa12.68□□□□□ -0.38
CDHR2-201ENST00000261944 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
CDHR2-201ENST00000261944 ZNF622Q969S3 477 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDHR2-201ENST00000261944 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
CDHR2-201ENST00000261944 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
CDHR2-201ENST00000261944 PTF1AQ7RTS3 328 aa12.67□□□□□ -0.38
CDHR2-201ENST00000261944 ATG3Q9NT62 314 aa12.67□□□□□ -0.38
CDHR2-201ENST00000261944 NALCNQ8IZF0 1738 aa12.67□□□□□ -0.38
CDHR2-201ENST00000261944 PALLDQ8WX93 1383 aa12.67□□□□□ -0.38
CDHR2-201ENST00000261944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.67□□□□□ -0.38
CDHR2-201ENST00000261944 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
CDHR2-201ENST00000261944 DNAAF4Q8WXU2 420 aa12.67□□□□□ -0.38
CDHR2-201ENST00000261944 PXDNQ92626 1479 aa12.67□□□□□ -0.38
CDHR2-201ENST00000261944 G2E3Q7L622 706 aa12.67□□□□□ -0.38
CDHR2-201ENST00000261944 UBE3BQ7Z3V4 1068 aa12.67□□□□□ -0.38
CDHR2-201ENST00000261944 HMMRO75330 724 aa12.66□□□□□ -0.38
CDHR2-201ENST00000261944 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
CDHR2-201ENST00000261944 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
CDHR2-201ENST00000261944 GIGYF1O75420 1035 aaPredicted RBP12.66□□□□□ -0.38
CDHR2-201ENST00000261944 ZBTB7AO95365 584 aa12.66□□□□□ -0.38
CDHR2-201ENST00000261944 EZH2Q15910 746 aaKnown RBP12.66□□□□□ -0.38
CDHR2-201ENST00000261944 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
CDHR2-201ENST00000261944 HMGB2P26583 209 aaKnown RBP12.66□□□□□ -0.38
CDHR2-201ENST00000261944 POLD1P28340 1107 aa12.66□□□□□ -0.38
CDHR2-201ENST00000261944 R3HDM1Q15032 1099 aaKnown RBP12.66□□□□□ -0.38
CDHR2-201ENST00000261944 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
CDHR2-201ENST00000261944 VAMP4O75379 141 aa12.65□□□□□ -0.38
CDHR2-201ENST00000261944 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
CDHR2-201ENST00000261944 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.38
CDHR2-201ENST00000261944 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
CDHR2-201ENST00000261944 DDX19BQ9UMR2 479 aa12.65□□□□□ -0.38
CDHR2-201ENST00000261944 VPS37DQ86XT2 251 aa12.64□□□□□ -0.39
CDHR2-201ENST00000261944 NEUROD6Q96NK8 337 aa12.64□□□□□ -0.39
CDHR2-201ENST00000261944 COL5A2P05997 1499 aaPredicted RBP12.64□□□□□ -0.39
CDHR2-201ENST00000261944 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
CDHR2-201ENST00000261944 TMEM57Q8N5G2 664 aa12.64□□□□□ -0.39
CDHR2-201ENST00000261944 DDX21Q9NR30 783 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDHR2-201ENST00000261944 CNNM1Q9NRU3 951 aa12.64□□□□□ -0.39
CDHR2-201ENST00000261944 MPHOSPH8Q99549 860 aa12.63□□□□□ -0.39
CDHR2-201ENST00000261944 PARP3Q9Y6F1 533 aa12.63□□□□□ -0.39
CDHR2-201ENST00000261944 IL16Q14005 1332 aa12.63□□□□□ -0.39
CDHR2-201ENST00000261944 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
CDHR2-201ENST00000261944 PROSER3Q2NL68 480 aa12.63□□□□□ -0.39
CDHR2-201ENST00000261944 SRP68Q9UHB9 627 aaKnown RBP12.63□□□□□ -0.39
CDHR2-201ENST00000261944 TNNQ9UQP3 1299 aa12.63□□□□□ -0.39
CDHR2-201ENST00000261944 G3BP1Q13283 466 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDHR2-201ENST00000261944 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
CDHR2-201ENST00000261944 NAP1L2Q9ULW6 460 aaPredicted RBP12.63□□□□□ -0.39
CDHR2-201ENST00000261944 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
CDHR2-201ENST00000261944 CAMTA1Q9Y6Y1 1673 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 CCDC57Q2TAC2 916 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 C20orf194Q5TEA3 1177 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 FAM89AQ96GI7 184 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 GNAI3P08754 354 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 FGD1P98174 961 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 NUTM1Q86Y26 1132 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 PTMAP06454 111 aaKnown RBP12.62□□□□□ -0.39
CDHR2-201ENST00000261944 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 ANKRD45Q5TZF3 282 aa12.62□□□□□ -0.39
CDHR2-201ENST00000261944 OVOS2A0A0G2JMS6 1433 aa12.61□□□□□ -0.39
CDHR2-201ENST00000261944 NWD1Q149M9 1564 aa12.61□□□□□ -0.39
CDHR2-201ENST00000261944 HCLS1P14317 486 aaPredicted RBP12.61□□□□□ -0.39
CDHR2-201ENST00000261944 CCT4P50991 539 aaKnown RBP12.61□□□□□ -0.39
CDHR2-201ENST00000261944 RPGRQ92834 1020 aaKnown RBP12.61□□□□□ -0.39
CDHR2-201ENST00000261944 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
CDHR2-201ENST00000261944 ITSN1Q15811 1721 aa12.61□□□□□ -0.39
CDHR2-201ENST00000261944 MEGF6O75095 1541 aa12.61□□□□□ -0.39
CDHR2-201ENST00000261944 TRIM27P14373 513 aa12.61□□□□□ -0.39
CDHR2-201ENST00000261944 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
CDHR2-201ENST00000261944 FMN2Q9NZ56 1722 aa12.6□□□□□ -0.39
CDHR2-201ENST00000261944 SRGAP3O43295 1099 aa12.6□□□□□ -0.39
CDHR2-201ENST00000261944 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
CDHR2-201ENST00000261944 TPTE2Q6XPS3 522 aa12.6□□□□□ -0.39
CDHR2-201ENST00000261944 PPP1R42Q7Z4L9 355 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms