RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.52■□□□□ 0.24
CDH1-201ENST00000261769 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
CDH1-201ENST00000261769 A0A1W2PP64 1363 aa16.52■□□□□ 0.24
CDH1-201ENST00000261769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.52■□□□□ 0.24
CDH1-201ENST00000261769 NFATC2IPQ8NCF5 419 aa16.52■□□□□ 0.23
CDH1-201ENST00000261769 NAPBQ9H115 298 aa16.52■□□□□ 0.23
CDH1-201ENST00000261769 LTKP29376 864 aa16.52■□□□□ 0.23
CDH1-201ENST00000261769 ABCA8O94911 1581 aa16.51■□□□□ 0.23
CDH1-201ENST00000261769 TTF1Q15361 905 aaPredicted RBP16.51■□□□□ 0.23
CDH1-201ENST00000261769 ANKRD18AQ8IVF6 992 aa16.51■□□□□ 0.23
CDH1-201ENST00000261769 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
CDH1-201ENST00000261769 NIP7Q9Y221 180 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDH1-201ENST00000261769 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
CDH1-201ENST00000261769 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
CDH1-201ENST00000261769 TTLL12Q14166 644 aaPredicted RBP16.51■□□□□ 0.23
CDH1-201ENST00000261769 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
CDH1-201ENST00000261769 PARP3Q9Y6F1 533 aa16.51■□□□□ 0.23
CDH1-201ENST00000261769 MPHOSPH10O00566 681 aaKnown RBP16.51■□□□□ 0.23
CDH1-201ENST00000261769 KDM4AO75164 1064 aa16.51■□□□□ 0.23
CDH1-201ENST00000261769 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
CDH1-201ENST00000261769 PIK3C2GO75747 1445 aa16.5■□□□□ 0.23
CDH1-201ENST00000261769 BAG3O95817 575 aa16.5■□□□□ 0.23
CDH1-201ENST00000261769 PZPP20742 1482 aa16.5■□□□□ 0.23
CDH1-201ENST00000261769 TMEM132AQ24JP5 1023 aa16.5■□□□□ 0.23
CDH1-201ENST00000261769 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
CDH1-201ENST00000261769 EDC4Q6P2E9 1401 aaKnown RBP16.5■□□□□ 0.23
CDH1-201ENST00000261769 DZIP3Q86Y13 1208 aaKnown RBP16.5■□□□□ 0.23
CDH1-201ENST00000261769 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
CDH1-201ENST00000261769 ZSCAN31Q96LW9 406 aaPredicted RBP16.5■□□□□ 0.23
CDH1-201ENST00000261769 CHPF2Q9P2E5 772 aa16.5■□□□□ 0.23
CDH1-201ENST00000261769 MAP3K5Q99683 1374 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 WASF1Q92558 559 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 PLEKHG3A1L390 1219 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 UQCRFS1P1P0C7P4 283 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 RNF41Q9H4P4 317 aaPredicted RBP16.49■□□□□ 0.23
CDH1-201ENST00000261769 USP21Q9UK80 565 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 MYO1BO43795 1136 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 STK38Q15208 465 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
CDH1-201ENST00000261769 MLH3Q9UHC1 1453 aa16.49■□□□□ 0.23
CDH1-201ENST00000261769 ANXA1P04083 346 aa16.48■□□□□ 0.23
CDH1-201ENST00000261769 ZNF444Q8N0Y2 327 aaPredicted RBP16.48■□□□□ 0.23
CDH1-201ENST00000261769 CCDC8Q9H0W5 538 aaPredicted RBP16.48■□□□□ 0.23
CDH1-201ENST00000261769 KRT18P05783 430 aaKnown RBP16.48■□□□□ 0.23
CDH1-201ENST00000261769 TRIM27P14373 513 aa16.48■□□□□ 0.23
CDH1-201ENST00000261769 OLFM4Q6UX06 510 aa16.48■□□□□ 0.23
CDH1-201ENST00000261769 SBNO1A3KN83 1393 aa16.48■□□□□ 0.23
CDH1-201ENST00000261769 PDIA4P13667 645 aaKnown RBP16.47■□□□□ 0.23
CDH1-201ENST00000261769 JAKMIP1Q96N16 626 aaKnown RBP16.47■□□□□ 0.23
CDH1-201ENST00000261769 KAT6BQ8WYB5 2073 aa16.47■□□□□ 0.23
CDH1-201ENST00000261769 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
CDH1-201ENST00000261769 SOS1Q07889 1333 aaPredicted RBP16.47■□□□□ 0.23
CDH1-201ENST00000261769 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
CDH1-201ENST00000261769 ECHDC1Q9NTX5 307 aa16.47■□□□□ 0.23
CDH1-201ENST00000261769 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
CDH1-201ENST00000261769 MYO5CQ9NQX4 1742 aa16.46■□□□□ 0.23
CDH1-201ENST00000261769 PDE4CQ08493 712 aa16.46■□□□□ 0.23
CDH1-201ENST00000261769 TRAPPC3LQ5T215 181 aa16.46■□□□□ 0.23
CDH1-201ENST00000261769 PDRG1Q9NUG6 133 aa16.46■□□□□ 0.23
CDH1-201ENST00000261769 CCDC196A0A1B0GTZ2 297 aa16.46■□□□□ 0.23
CDH1-201ENST00000261769 RNMTO43148 476 aaKnown RBP16.46■□□□□ 0.23
CDH1-201ENST00000261769 KINO60870 393 aaKnown RBP16.46■□□□□ 0.23
CDH1-201ENST00000261769 PRM3Q9NNZ6 103 aa16.46■□□□□ 0.23
CDH1-201ENST00000261769 HDAC9Q9UKV0 1011 aa16.46■□□□□ 0.23
CDH1-201ENST00000261769 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.22
CDH1-201ENST00000261769 GSTO1P78417 241 aa16.46■□□□□ 0.22
CDH1-201ENST00000261769 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.22
CDH1-201ENST00000261769 EPS15P42566 896 aa16.45■□□□□ 0.22
CDH1-201ENST00000261769 ZGPATQ8N5A5 531 aaKnown RBP16.45■□□□□ 0.22
CDH1-201ENST00000261769 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
CDH1-201ENST00000261769 LINS1Q8NG48 757 aa16.45■□□□□ 0.22
CDH1-201ENST00000261769 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
CDH1-201ENST00000261769 STK3Q13188 491 aa16.45■□□□□ 0.22
CDH1-201ENST00000261769 OGFOD1Q8N543 542 aa16.45■□□□□ 0.22
CDH1-201ENST00000261769 HLA-DOAP06340 250 aa16.44■□□□□ 0.22
CDH1-201ENST00000261769 TMEM94Q12767 1356 aa16.44■□□□□ 0.22
CDH1-201ENST00000261769 ZNF76P36508 570 aa16.44■□□□□ 0.22
CDH1-201ENST00000261769 CARD14Q9BXL6 1004 aa16.44■□□□□ 0.22
CDH1-201ENST00000261769 GRM8O00222 908 aa16.44■□□□□ 0.22
CDH1-201ENST00000261769 FAM98CQ17RN3 349 aaKnown RBP16.44■□□□□ 0.22
CDH1-201ENST00000261769 PLEKHH1Q9ULM0 1364 aa16.44■□□□□ 0.22
CDH1-201ENST00000261769 SEC63Q9UGP8 760 aaKnown RBP16.44■□□□□ 0.22
CDH1-201ENST00000261769 GNPATO15228 680 aa16.43■□□□□ 0.22
CDH1-201ENST00000261769 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
CDH1-201ENST00000261769 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
CDH1-201ENST00000261769 PLEKHG1Q9ULL1 1385 aa16.43■□□□□ 0.22
CDH1-201ENST00000261769 BAG6P46379 1132 aa16.43■□□□□ 0.22
CDH1-201ENST00000261769 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
CDH1-201ENST00000261769 HMGB1P09429 215 aaKnown RBP16.43■□□□□ 0.22
CDH1-201ENST00000261769 DEKP35659 375 aaKnown RBP16.43■□□□□ 0.22
CDH1-201ENST00000261769 EVI5LQ96CN4 794 aa16.43■□□□□ 0.22
CDH1-201ENST00000261769 CHD1O14646 1710 aa16.43■□□□□ 0.22
CDH1-201ENST00000261769 SMARCA5O60264 1052 aaPredicted RBP16.42■□□□□ 0.22
CDH1-201ENST00000261769 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
CDH1-201ENST00000261769 ZC3H12CQ9C0D7 883 aaKnown RBP16.42■□□□□ 0.22
CDH1-201ENST00000261769 ZNF213O14771 459 aa16.42■□□□□ 0.22
CDH1-201ENST00000261769 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
CDH1-201ENST00000261769 OFD1O75665 1012 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms