RNA–Protein interactions for RNA: ENST00000261177.9

TSPAN11-201, Transcript of tetraspanin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN11, Length 5,505 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN11-201ENST00000261177 UBXN4Q92575 508 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 MPNDQ8N594 471 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 C8orf76Q96K31 380 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 EPB41L2O43491 1005 aaKnown RBP17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 SSFA2P28290 1259 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 CFAP100Q494V2 611 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 TMCO3Q6UWJ1 677 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 NAPBQ9H115 298 aa17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.28■□□□□ 0.36
TSPAN11-201ENST00000261177 CGNQ9P2M7 1197 aaKnown RBP17.27■□□□□ 0.36
TSPAN11-201ENST00000261177 EIF2AK4Q9P2K8 1649 aaKnown RBP17.27■□□□□ 0.36
TSPAN11-201ENST00000261177 CAMK4Q16566 473 aa17.27■□□□□ 0.36
TSPAN11-201ENST00000261177 FBXO31Q5XUX0 539 aaPredicted RBP17.27■□□□□ 0.36
TSPAN11-201ENST00000261177 CALCOCO1Q9P1Z2 691 aa17.27■□□□□ 0.36
TSPAN11-201ENST00000261177 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.35
TSPAN11-201ENST00000261177 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.35
TSPAN11-201ENST00000261177 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.35
TSPAN11-201ENST00000261177 CCDC8Q9H0W5 538 aaPredicted RBP17.27■□□□□ 0.35
TSPAN11-201ENST00000261177 NUTM2BA6NNL0 878 aaPredicted RBP17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 NUTM2EB1AL46 878 aaPredicted RBP17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 NUTM2AQ8IVF1 878 aaPredicted RBP17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 ABCF2Q9UG63 623 aa17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 SFPQP23246 707 aaKnown RBP eCLIP17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 NUCB1Q02818 461 aa17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 SKAP1Q86WV1 359 aa17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 ZSCAN12O43309 604 aa17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 IGHDP01880 384 aa17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 SLC5A1P13866 664 aa17.26■□□□□ 0.35
TSPAN11-201ENST00000261177 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 ZNF213O14771 459 aa17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 PRAG1Q86YV5 1406 aa17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 FAM177A1Q8N128 213 aaPredicted RBP17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 EIF5P55010 431 aaKnown RBP17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 ZNF397Q8NF99 534 aaPredicted RBP17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 ARHGAP29Q52LW3 1261 aa17.25■□□□□ 0.35
TSPAN11-201ENST00000261177 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
TSPAN11-201ENST00000261177 PLCH2O75038 1416 aa17.24■□□□□ 0.35
TSPAN11-201ENST00000261177 TEX13AQ9BXU3 409 aaPredicted RBP17.24■□□□□ 0.35
TSPAN11-201ENST00000261177 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
TSPAN11-201ENST00000261177 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
TSPAN11-201ENST00000261177 A0A087WZG4 1122 aa17.24■□□□□ 0.35
TSPAN11-201ENST00000261177 MAP3K2Q9Y2U5 619 aa17.24■□□□□ 0.35
TSPAN11-201ENST00000261177 TTC21AQ8NDW8 1320 aa17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 NEMFO60524 1076 aa17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 PTPN14Q15678 1187 aa17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 UBE2Q2Q8WVN8 375 aa17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 TTF1Q15361 905 aaPredicted RBP17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 PUS7Q96PZ0 661 aaKnown RBP17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 SLC12A7Q9Y666 1083 aa17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 CCDC148Q8NFR7 591 aa17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 POLR3AO14802 1390 aaPredicted RBP17.23■□□□□ 0.35
TSPAN11-201ENST00000261177 STX6O43752 255 aa17.22■□□□□ 0.35
TSPAN11-201ENST00000261177 KIAA1328Q86T90 577 aa17.22■□□□□ 0.35
TSPAN11-201ENST00000261177 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
TSPAN11-201ENST00000261177 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
TSPAN11-201ENST00000261177 KIF18AQ8NI77 898 aa17.22■□□□□ 0.35
TSPAN11-201ENST00000261177 ACEP12821 1306 aa17.22■□□□□ 0.35
TSPAN11-201ENST00000261177 USP5P45974 858 aa17.22■□□□□ 0.35
TSPAN11-201ENST00000261177 SSRP1Q08945 709 aaKnown RBP17.22■□□□□ 0.35
TSPAN11-201ENST00000261177 ZSCAN29Q8IWY8 852 aaPredicted RBP17.22■□□□□ 0.35
TSPAN11-201ENST00000261177 ZNF76P36508 570 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 BICDL1Q6ZP65 573 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 GJB2P29033 226 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 CCDC102AQ96A19 550 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 TRMT112Q9UI30 125 aaKnown RBP17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 ERICH4A6NGS2 130 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 MINDY4BA8MYZ0 360 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 DYNC1I1O14576 645 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 MCM3P25205 808 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 FAM107BQ9H098 131 aa17.21■□□□□ 0.35
TSPAN11-201ENST00000261177 CAVIN2O95810 425 aa17.21■□□□□ 0.34
TSPAN11-201ENST00000261177 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 UVSSAQ2YD98 709 aa17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 TAF4BQ92750 862 aa17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 MKNK2Q9HBH9 465 aa17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 SKIDA1Q1XH10 827 aa17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 CTTNBP2Q8WZ74 1663 aa17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 GOLGA8BA8MQT2 603 aa17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 POLR3DP05423 398 aaPredicted RBP17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 CLIP2Q9UDT6 1046 aa17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 ATP10BO94823 1461 aa17.2■□□□□ 0.34
TSPAN11-201ENST00000261177 GOLGA8AA7E2F4 631 aa17.19■□□□□ 0.34
TSPAN11-201ENST00000261177 CWC25Q9NXE8 425 aaPredicted RBP17.19■□□□□ 0.34
TSPAN11-201ENST00000261177 FOXO3O43524 673 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms