RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 MIS18AQ9NYP9 233 aa22.21■■□□□ 1.15
SSB-201ENST00000260956 TSPYL4Q9UJ04 414 aa22.21■■□□□ 1.15
SSB-201ENST00000260956 TNS1Q9HBL0 1735 aaKnown RBP22.21■■□□□ 1.15
SSB-201ENST00000260956 PRIM1P49642 420 aaKnown RBP22.2■■□□□ 1.14
SSB-201ENST00000260956 NKX1-1Q15270 411 aaPredicted RBP22.2■■□□□ 1.14
SSB-201ENST00000260956 PLEKHO1Q53GL0 409 aaPredicted RBP22.2■■□□□ 1.14
SSB-201ENST00000260956 BCL11BQ9C0K0 894 aaPredicted RBP22.2■■□□□ 1.14
SSB-201ENST00000260956 APBA3O96018 575 aa22.2■■□□□ 1.14
SSB-201ENST00000260956 SOS1Q07889 1333 aaPredicted RBP22.19■■□□□ 1.14
SSB-201ENST00000260956 EN1Q05925 392 aaPredicted RBP22.19■■□□□ 1.14
SSB-201ENST00000260956 ZNF530Q6P9A1 599 aaPredicted RBP22.19■■□□□ 1.14
SSB-201ENST00000260956 GCC1Q96CN9 775 aa22.19■■□□□ 1.14
SSB-201ENST00000260956 PLEKHG2Q9H7P9 1386 aa22.19■■□□□ 1.14
SSB-201ENST00000260956 SIPA1L3O60292 1781 aaPredicted RBP22.18■■□□□ 1.14
SSB-201ENST00000260956 AMOTQ4VCS5 1084 aa22.18■■□□□ 1.14
SSB-201ENST00000260956 CHD1LQ86WJ1 897 aa22.18■■□□□ 1.14
SSB-201ENST00000260956 IFNL2Q8IZJ0 200 aa22.18■■□□□ 1.14
SSB-201ENST00000260956 TBC1D32Q96NH3 1257 aa22.17■■□□□ 1.14
SSB-201ENST00000260956 SYTL4Q96C24 671 aaPredicted RBP22.16■■□□□ 1.14
SSB-201ENST00000260956 CAMKK2Q96RR4 588 aa22.16■■□□□ 1.14
SSB-201ENST00000260956 TOGARAM1Q9Y4F4 1720 aa22.15■■□□□ 1.14
SSB-201ENST00000260956 SF3B2Q13435 895 aaKnown RBP22.15■■□□□ 1.14
SSB-201ENST00000260956 G2E3Q7L622 706 aa22.15■■□□□ 1.14
SSB-201ENST00000260956 KAT6BQ8WYB5 2073 aa22.15■■□□□ 1.14
SSB-201ENST00000260956 KDM6AO15550 1401 aaPredicted RBP22.15■■□□□ 1.14
SSB-201ENST00000260956 DOT1LQ8TEK3 1739 aa22.15■■□□□ 1.14
SSB-201ENST00000260956 PXDNLA1KZ92 1463 aa22.14■■□□□ 1.14
SSB-201ENST00000260956 EZH2Q15910 746 aaKnown RBP22.14■■□□□ 1.14
SSB-201ENST00000260956 NHSQ6T4R5 1651 aa22.14■■□□□ 1.13
SSB-201ENST00000260956 MPRIPQ6WCQ1 1025 aa22.14■■□□□ 1.13
SSB-201ENST00000260956 PROM2Q8N271 834 aa22.14■■□□□ 1.13
SSB-201ENST00000260956 ANKRD44Q8N8A2 993 aa22.14■■□□□ 1.13
SSB-201ENST00000260956 LNPKQ9C0E8 428 aa22.14■■□□□ 1.13
SSB-201ENST00000260956 LGR6Q9HBX8 967 aa22.13■■□□□ 1.13
SSB-201ENST00000260956 SLC4A2P04920 1241 aa22.12■■□□□ 1.13
SSB-201ENST00000260956 BAG6P46379 1132 aa22.12■■□□□ 1.13
SSB-201ENST00000260956 TAF7Q15545 349 aaPredicted RBP22.12■■□□□ 1.13
SSB-201ENST00000260956 AKAP4Q5JQC9 854 aa22.11■■□□□ 1.13
SSB-201ENST00000260956 CEP85Q6P2H3 762 aa22.11■■□□□ 1.13
SSB-201ENST00000260956 PIGBQ92521 554 aa22.11■■□□□ 1.13
SSB-201ENST00000260956 DCTPP1Q9H773 170 aa22.11■■□□□ 1.13
SSB-201ENST00000260956 PLSCR1O15162 318 aa22.1■■□□□ 1.13
SSB-201ENST00000260956 BMP2KLQ5H9B9 411 aa22.1■■□□□ 1.13
SSB-201ENST00000260956 C1orf141Q5JVX7 400 aa22.1■■□□□ 1.13
SSB-201ENST00000260956 DCAF5Q96JK2 942 aa22.1■■□□□ 1.13
SSB-201ENST00000260956 MEIS3Q99687 375 aa22.1■■□□□ 1.13
SSB-201ENST00000260956 SLC4A3P48751 1232 aa22.09■■□□□ 1.13
SSB-201ENST00000260956 BTAF1O14981 1849 aa22.09■■□□□ 1.13
SSB-201ENST00000260956 RPAP2Q8IXW5 612 aaPredicted RBP22.07■■□□□ 1.12
SSB-201ENST00000260956 KCNQ4P56696 695 aa22.06■■□□□ 1.12
SSB-201ENST00000260956 ANKRD45Q5TZF3 282 aa22.06■■□□□ 1.12
SSB-201ENST00000260956 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
SSB-201ENST00000260956 CCT4P50991 539 aaKnown RBP22.06■■□□□ 1.12
SSB-201ENST00000260956 CCDC30Q5VVM6 783 aa22.06■■□□□ 1.12
SSB-201ENST00000260956 ITGB4P16144 1822 aa22.05■■□□□ 1.12
SSB-201ENST00000260956 TUBGCP6Q96RT7 1819 aa22.05■■□□□ 1.12
SSB-201ENST00000260956 ERVV-2B6SEH9 535 aa22.05■■□□□ 1.12
SSB-201ENST00000260956 F6X3S4 739 aa22.05■■□□□ 1.12
SSB-201ENST00000260956 RNMTO43148 476 aaKnown RBP22.05■■□□□ 1.12
SSB-201ENST00000260956 FLIIQ13045 1269 aa22.05■■□□□ 1.12
SSB-201ENST00000260956 NFATC2IPQ8NCF5 419 aa22.05■■□□□ 1.12
SSB-201ENST00000260956 LRRC4BQ9NT99 713 aa22.05■■□□□ 1.12
SSB-201ENST00000260956 ASAP1Q9ULH1 1129 aa22.05■■□□□ 1.12
SSB-201ENST00000260956 HEG1Q9ULI3 1381 aa22.04■■□□□ 1.12
SSB-201ENST00000260956 TXNRD1Q16881 649 aa22.04■■□□□ 1.12
SSB-201ENST00000260956 HOXB7P09629 217 aa22.03■■□□□ 1.12
SSB-201ENST00000260956 EIF4A1P60842 406 aaKnown RBP22.03■■□□□ 1.12
SSB-201ENST00000260956 NBR1Q14596 966 aa22.03■■□□□ 1.12
SSB-201ENST00000260956 TMOD3Q9NYL9 352 aa22.03■■□□□ 1.12
SSB-201ENST00000260956 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
SSB-201ENST00000260956 STK31Q9BXU1 1019 aa22.02■■□□□ 1.12
SSB-201ENST00000260956 ATG3Q9NT62 314 aa22.02■■□□□ 1.12
SSB-201ENST00000260956 CABP4P57796 275 aa22.01■■□□□ 1.11
SSB-201ENST00000260956 UPF2Q9HAU5 1272 aaKnown RBP22.01■■□□□ 1.11
SSB-201ENST00000260956 PLEKHM2Q8IWE5 1019 aa22■■□□□ 1.11
SSB-201ENST00000260956 SLC52A2Q9HAB3 445 aa22■■□□□ 1.11
SSB-201ENST00000260956 RREB1Q92766 1687 aa21.99■■□□□ 1.11
SSB-201ENST00000260956 GSPT1P15170 499 aaKnown RBP21.98■■□□□ 1.11
SSB-201ENST00000260956 C22orf23Q9BZE7 217 aa21.98■■□□□ 1.11
SSB-201ENST00000260956 ANO8Q9HCE9 1232 aaPredicted RBP21.98■■□□□ 1.11
SSB-201ENST00000260956 PALLDQ8WX93 1383 aa21.98■■□□□ 1.11
SSB-201ENST00000260956 MRC1P22897 1456 aa21.98■■□□□ 1.11
SSB-201ENST00000260956 RGPD3A6NKT7 1758 aaPredicted RBP21.98■■□□□ 1.11
SSB-201ENST00000260956 RGPD4Q7Z3J3 1758 aa21.98■■□□□ 1.11
SSB-201ENST00000260956 KCNQ3O43525 872 aa21.97■■□□□ 1.11
SSB-201ENST00000260956 RBM25P49756 843 aaKnown RBP21.97■■□□□ 1.11
SSB-201ENST00000260956 SLC4A9Q96Q91 983 aa21.97■■□□□ 1.11
SSB-201ENST00000260956 NUP188Q5SRE5 1749 aa21.96■■□□□ 1.11
SSB-201ENST00000260956 MFAP1P55081 439 aaKnown RBP21.96■■□□□ 1.11
SSB-201ENST00000260956 SLC39A6Q13433 755 aa21.96■■□□□ 1.11
SSB-201ENST00000260956 HDGFL1Q5TGJ6 251 aa21.96■■□□□ 1.11
SSB-201ENST00000260956 TBC1D2Q9BYX2 928 aa21.95■■□□□ 1.1
SSB-201ENST00000260956 C5P01031 1676 aa21.95■■□□□ 1.1
SSB-201ENST00000260956 FKBP5Q13451 457 aaPredicted RBP21.94■■□□□ 1.1
SSB-201ENST00000260956 ANTXR1Q9H6X2 564 aa21.94■■□□□ 1.1
SSB-201ENST00000260956 LY75O60449 1722 aa21.94■■□□□ 1.1
SSB-201ENST00000260956 SLC4A10Q6U841 1118 aa21.94■■□□□ 1.1
SSB-201ENST00000260956 TBC1D9Q6ZT07 1266 aa21.94■■□□□ 1.1
SSB-201ENST00000260956 OTUD7AQ8TE49 926 aaPredicted RBP21.94■■□□□ 1.1
SSB-201ENST00000260956 SALL3Q9BXA9 1300 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms