RNA–Protein interactions for RNA: ENST00000258104.7

DYSF-201, Transcript of dysferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DYSF, Length 6,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-201ENST00000258104 CTNNA2P26232 953 aa17.4■□□□□ 0.38
DYSF-201ENST00000258104 CCDC96Q2M329 555 aa17.4■□□□□ 0.38
DYSF-201ENST00000258104 FSIP1Q8NA03 581 aa17.4■□□□□ 0.38
DYSF-201ENST00000258104 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
DYSF-201ENST00000258104 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
DYSF-201ENST00000258104 PAFAH1B1P43034 410 aa17.39■□□□□ 0.37
DYSF-201ENST00000258104 CRACR2BQ8N4Y2 399 aaPredicted RBP17.39■□□□□ 0.37
DYSF-201ENST00000258104 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.37
DYSF-201ENST00000258104 SMC1AQ14683 1233 aaKnown RBP17.39■□□□□ 0.37
DYSF-201ENST00000258104 SMARCC1Q92922 1105 aaPredicted RBP17.38■□□□□ 0.37
DYSF-201ENST00000258104 HOOK3Q86VS8 718 aa17.38■□□□□ 0.37
DYSF-201ENST00000258104 DRC1Q96MC2 740 aa17.38■□□□□ 0.37
DYSF-201ENST00000258104 CCDC175P0C221 793 aa17.38■□□□□ 0.37
DYSF-201ENST00000258104 NOP2P46087 812 aaKnown RBP17.38■□□□□ 0.37
DYSF-201ENST00000258104 MTIF2P46199 727 aaKnown RBP17.38■□□□□ 0.37
DYSF-201ENST00000258104 USO1O60763 962 aaKnown RBP17.38■□□□□ 0.37
DYSF-201ENST00000258104 IFIT1P09914 478 aaKnown RBP17.38■□□□□ 0.37
DYSF-201ENST00000258104 NAPBQ9H115 298 aa17.38■□□□□ 0.37
DYSF-201ENST00000258104 COMMD10Q9Y6G5 202 aa17.38■□□□□ 0.37
DYSF-201ENST00000258104 F6X3S4 739 aa17.38■□□□□ 0.37
DYSF-201ENST00000258104 NLRP5P59047 1200 aa17.38■□□□□ 0.37
DYSF-201ENST00000258104 TNIP1Q15025 636 aa17.38■□□□□ 0.37
DYSF-201ENST00000258104 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
DYSF-201ENST00000258104 NBPF8Q3BBV2 869 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 AFAP1Q8N556 730 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 SLC12A7Q9Y666 1083 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 YEATS4O95619 227 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 GJB2P29033 226 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 MICALCLQ6ZW33 695 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
DYSF-201ENST00000258104 MCM3P25205 808 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 CALCOCO1Q9P1Z2 691 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 ERBINQ96RT1 1412 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 KIF2AO00139 706 aaPredicted RBP17.37■□□□□ 0.37
DYSF-201ENST00000258104 RAB11FIP3O75154 756 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 HSP90AA4PQ58FG1 418 aa17.37■□□□□ 0.37
DYSF-201ENST00000258104 JADE2Q9NQC1 790 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 GOLGA8BA8MQT2 603 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 VPS36Q86VN1 386 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 TRIM21P19474 475 aaKnown RBP17.36■□□□□ 0.37
DYSF-201ENST00000258104 SNW1Q13573 536 aaKnown RBP17.36■□□□□ 0.37
DYSF-201ENST00000258104 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 GNAT3A8MTJ3 354 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 TCERG1LQ5VWI1 586 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 VAT1LQ9HCJ6 419 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 SCAPERQ9BY12 1400 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 CEP135Q66GS9 1140 aa17.36■□□□□ 0.37
DYSF-201ENST00000258104 PUF60Q9UHX1 559 aaKnown RBP17.36■□□□□ 0.37
DYSF-201ENST00000258104 MYO1BO43795 1136 aa17.35■□□□□ 0.37
DYSF-201ENST00000258104 TMPOP42166 694 aaKnown RBP17.35■□□□□ 0.37
DYSF-201ENST00000258104 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
DYSF-201ENST00000258104 ANKIB1Q9P2G1 1089 aa17.35■□□□□ 0.37
DYSF-201ENST00000258104 PAIP2Q9BPZ3 127 aaKnown RBP17.35■□□□□ 0.37
DYSF-201ENST00000258104 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
DYSF-201ENST00000258104 FERMT2Q96AC1 680 aa17.35■□□□□ 0.37
DYSF-201ENST00000258104 PIP4K2BP78356 416 aa17.35■□□□□ 0.37
DYSF-201ENST00000258104 GOLGA8AA7E2F4 631 aa17.35■□□□□ 0.37
DYSF-201ENST00000258104 PPP4R3AQ6IN85 833 aa17.35■□□□□ 0.37
DYSF-201ENST00000258104 ZNF213O14771 459 aa17.34■□□□□ 0.37
DYSF-201ENST00000258104 SF3B2Q13435 895 aaKnown RBP17.34■□□□□ 0.37
DYSF-201ENST00000258104 ZNF219Q9P2Y4 722 aaPredicted RBP17.34■□□□□ 0.37
DYSF-201ENST00000258104 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
DYSF-201ENST00000258104 SLFN5Q08AF3 891 aa17.34■□□□□ 0.37
DYSF-201ENST00000258104 WDR78Q5VTH9 848 aa17.34■□□□□ 0.37
DYSF-201ENST00000258104 TBC1D2Q9BYX2 928 aa17.34■□□□□ 0.37
DYSF-201ENST00000258104 ANKRD30BQ9BXX2 1392 aa17.34■□□□□ 0.37
DYSF-201ENST00000258104 RTEL1-TNFRSF6BF6WH68 1400 aa17.34■□□□□ 0.37
DYSF-201ENST00000258104 DZIP1Q86YF9 867 aaKnown RBP17.34■□□□□ 0.37
DYSF-201ENST00000258104 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
DYSF-201ENST00000258104 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
DYSF-201ENST00000258104 IFIT3O14879 490 aaKnown RBP17.33■□□□□ 0.37
DYSF-201ENST00000258104 PRC1O43663 620 aa17.33■□□□□ 0.37
DYSF-201ENST00000258104 CCDC150Q8NCX0 1101 aa17.33■□□□□ 0.37
DYSF-201ENST00000258104 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.37
DYSF-201ENST00000258104 ALS2CR12Q96Q35 445 aa17.33■□□□□ 0.36
DYSF-201ENST00000258104 SCAND2PQ9GZW5 306 aaPredicted RBP17.33■□□□□ 0.36
DYSF-201ENST00000258104 CCDC12Q8WUD4 166 aaPredicted RBP17.33■□□□□ 0.36
DYSF-201ENST00000258104 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.36
DYSF-201ENST00000258104 CCDC40Q4G0X9 1142 aa17.33■□□□□ 0.36
DYSF-201ENST00000258104 CAVIN4Q5BKX8 364 aa17.32■□□□□ 0.36
DYSF-201ENST00000258104 ZNF444Q8N0Y2 327 aaPredicted RBP17.32■□□□□ 0.36
DYSF-201ENST00000258104 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
DYSF-201ENST00000258104 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
DYSF-201ENST00000258104 TMEM266Q2M3C6 531 aa17.32■□□□□ 0.36
DYSF-201ENST00000258104 HAND2P61296 217 aa17.32■□□□□ 0.36
DYSF-201ENST00000258104 STX1AQ16623 288 aa17.32■□□□□ 0.36
DYSF-201ENST00000258104 CTCFLQ8NI51 663 aaPredicted RBP17.32■□□□□ 0.36
DYSF-201ENST00000258104 NSD3Q9BZ95 1437 aa17.31■□□□□ 0.36
DYSF-201ENST00000258104 GIMAP6Q6P9H5 292 aa17.31■□□□□ 0.36
DYSF-201ENST00000258104 FGFR1OPO95684 399 aaKnown RBP17.31■□□□□ 0.36
DYSF-201ENST00000258104 AKAP2Q9Y2D5 859 aa17.31■□□□□ 0.36
DYSF-201ENST00000258104 APBB1IPQ7Z5R6 666 aaPredicted RBP17.3■□□□□ 0.36
DYSF-201ENST00000258104 PPM1EQ8WY54 764 aa17.3■□□□□ 0.36
DYSF-201ENST00000258104 TMOD2Q9NZR1 351 aa17.3■□□□□ 0.36
DYSF-201ENST00000258104 IDEP14735 1019 aa17.3■□□□□ 0.36
DYSF-201ENST00000258104 CCDC194A0A1B0GVG4 234 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms