RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 EPB41L2O43491 1005 aaKnown RBP20.55■□□□□ 0.88
CDK4-201ENST00000257904 UPF3BQ9BZI7 483 aaKnown RBP20.55■□□□□ 0.88
CDK4-201ENST00000257904 LRRFIP2Q9Y608 721 aaKnown RBP20.55■□□□□ 0.88
CDK4-201ENST00000257904 IGSF1Q8N6C5 1336 aa20.55■□□□□ 0.88
CDK4-201ENST00000257904 HTATSF1O43719 755 aaKnown RBP20.55■□□□□ 0.88
CDK4-201ENST00000257904 CSPP1Q1MSJ5 1256 aa20.55■□□□□ 0.88
CDK4-201ENST00000257904 N4BP2Q86UW6 1770 aaPredicted RBP20.55■□□□□ 0.88
CDK4-201ENST00000257904 EYA1Q99502 592 aa20.54■□□□□ 0.88
CDK4-201ENST00000257904 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
CDK4-201ENST00000257904 PXDNLA1KZ92 1463 aa20.53■□□□□ 0.88
CDK4-201ENST00000257904 HSPA4P34932 840 aa20.53■□□□□ 0.88
CDK4-201ENST00000257904 WDR33Q9C0J8 1336 aaKnown RBP20.53■□□□□ 0.88
CDK4-201ENST00000257904 NWD1Q149M9 1564 aa20.53■□□□□ 0.88
CDK4-201ENST00000257904 PHF14O94880 888 aa20.52■□□□□ 0.88
CDK4-201ENST00000257904 IL25Q9H293 177 aa20.52■□□□□ 0.88
CDK4-201ENST00000257904 SOS1Q07889 1333 aaPredicted RBP20.52■□□□□ 0.88
CDK4-201ENST00000257904 NECTIN2Q92692 538 aa20.52■□□□□ 0.87
CDK4-201ENST00000257904 PIK3C2AO00443 1686 aa20.51■□□□□ 0.87
CDK4-201ENST00000257904 GADD45BO75293 160 aaPredicted RBP20.51■□□□□ 0.87
CDK4-201ENST00000257904 PLEKHG5O94827 1062 aa20.51■□□□□ 0.87
CDK4-201ENST00000257904 USP44Q9H0E7 712 aa20.51■□□□□ 0.87
CDK4-201ENST00000257904 NLRP6P59044 892 aa20.5■□□□□ 0.87
CDK4-201ENST00000257904 GDPD2Q9HCC8 539 aa20.5■□□□□ 0.87
CDK4-201ENST00000257904 KDM4FA0A1W2PPD8 638 aa20.5■□□□□ 0.87
CDK4-201ENST00000257904 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
CDK4-201ENST00000257904 UBTFL1P0CB47 393 aaPredicted RBP20.5■□□□□ 0.87
CDK4-201ENST00000257904 AMPHP49418 695 aa20.5■□□□□ 0.87
CDK4-201ENST00000257904 USP48Q86UV5 1035 aa20.5■□□□□ 0.87
CDK4-201ENST00000257904 SSH3Q8TE77 659 aa20.5■□□□□ 0.87
CDK4-201ENST00000257904 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
CDK4-201ENST00000257904 FOXD4L6Q3SYB3 417 aaPredicted RBP20.49■□□□□ 0.87
CDK4-201ENST00000257904 NUTM2GQ5VZR2 741 aa20.49■□□□□ 0.87
CDK4-201ENST00000257904 FOXD4L3Q6VB84 417 aaPredicted RBP20.49■□□□□ 0.87
CDK4-201ENST00000257904 RPAP1Q9BWH6 1393 aaPredicted RBP20.49■□□□□ 0.87
CDK4-201ENST00000257904 UQCRHLA0A096LP55 91 aa20.49■□□□□ 0.87
CDK4-201ENST00000257904 UQCRHP07919 91 aa20.49■□□□□ 0.87
CDK4-201ENST00000257904 TMEM87AQ8NBN3 555 aa20.49■□□□□ 0.87
CDK4-201ENST00000257904 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
CDK4-201ENST00000257904 RBM10P98175 930 aaKnown RBP20.48■□□□□ 0.87
CDK4-201ENST00000257904 RAD50Q92878 1312 aa20.48■□□□□ 0.87
CDK4-201ENST00000257904 RAB11FIP3O75154 756 aa20.47■□□□□ 0.87
CDK4-201ENST00000257904 NUTM1Q86Y26 1132 aa20.47■□□□□ 0.87
CDK4-201ENST00000257904 ZMYND15Q9H091 742 aa20.47■□□□□ 0.87
CDK4-201ENST00000257904 PHF8Q9UPP1 1060 aa20.47■□□□□ 0.87
CDK4-201ENST00000257904 ABTB2Q8N961 1025 aa20.47■□□□□ 0.87
CDK4-201ENST00000257904 FAM184AQ8NB25 1140 aa20.47■□□□□ 0.87
CDK4-201ENST00000257904 PTMAP06454 111 aaKnown RBP20.46■□□□□ 0.87
CDK4-201ENST00000257904 C14orf37Q86TY3 774 aa20.46■□□□□ 0.87
CDK4-201ENST00000257904 PI4K2BQ8TCG2 481 aa20.46■□□□□ 0.87
CDK4-201ENST00000257904 SGSM2O43147 1006 aa20.46■□□□□ 0.87
CDK4-201ENST00000257904 HSPA2P54652 639 aa20.46■□□□□ 0.87
CDK4-201ENST00000257904 POLA2Q14181 598 aa20.46■□□□□ 0.87
CDK4-201ENST00000257904 PROSER2Q86WR7 435 aaPredicted RBP20.46■□□□□ 0.87
CDK4-201ENST00000257904 BABAM1Q9NWV8 329 aa20.46■□□□□ 0.87
CDK4-201ENST00000257904 UVSSAQ2YD98 709 aa20.45■□□□□ 0.86
CDK4-201ENST00000257904 IL17REQ8NFR9 667 aa20.45■□□□□ 0.86
CDK4-201ENST00000257904 MAP7D2Q96T17 732 aa20.45■□□□□ 0.86
CDK4-201ENST00000257904 SNX14Q9Y5W7 946 aa20.45■□□□□ 0.86
CDK4-201ENST00000257904 MAP3K5Q99683 1374 aa20.45■□□□□ 0.86
CDK4-201ENST00000257904 SURF6O75683 361 aaKnown RBP20.44■□□□□ 0.86
CDK4-201ENST00000257904 KIAA2012Q0VF49 1180 aa20.44■□□□□ 0.86
CDK4-201ENST00000257904 SASS6Q6UVJ0 657 aa20.44■□□□□ 0.86
CDK4-201ENST00000257904 PPP1R42Q7Z4L9 355 aa20.44■□□□□ 0.86
CDK4-201ENST00000257904 TTC14Q96N46 770 aa20.44■□□□□ 0.86
CDK4-201ENST00000257904 FAM13BQ9NYF5 915 aa20.44■□□□□ 0.86
CDK4-201ENST00000257904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
CDK4-201ENST00000257904 MAP4K4O95819 1239 aaPredicted RBP20.44■□□□□ 0.86
CDK4-201ENST00000257904 TAF7Q15545 349 aaPredicted RBP20.44■□□□□ 0.86
CDK4-201ENST00000257904 CCDC183Q5T5S1 534 aa20.44■□□□□ 0.86
CDK4-201ENST00000257904 RHPN1Q8TCX5 695 aa20.44■□□□□ 0.86
CDK4-201ENST00000257904 DYNC1I1O14576 645 aa20.43■□□□□ 0.86
CDK4-201ENST00000257904 LSG1Q9H089 658 aaKnown RBP20.43■□□□□ 0.86
CDK4-201ENST00000257904 ZSCAN22P10073 491 aaPredicted RBP20.42■□□□□ 0.86
CDK4-201ENST00000257904 ESCO1Q5FWF5 840 aa20.42■□□□□ 0.86
CDK4-201ENST00000257904 MARF1Q9Y4F3 1742 aaKnown RBP20.42■□□□□ 0.86
CDK4-201ENST00000257904 HDGFL1Q5TGJ6 251 aa20.42■□□□□ 0.86
CDK4-201ENST00000257904 KIF1BPQ96EK5 621 aa20.42■□□□□ 0.86
CDK4-201ENST00000257904 PHAXQ9H814 394 aaKnown RBP20.42■□□□□ 0.86
CDK4-201ENST00000257904 CNPY2Q9Y2B0 182 aa20.42■□□□□ 0.86
CDK4-201ENST00000257904 AK2P54819 239 aa20.41■□□□□ 0.86
CDK4-201ENST00000257904 CNTROBQ8N137 903 aa20.41■□□□□ 0.86
CDK4-201ENST00000257904 RASEFQ8IZ41 740 aa20.41■□□□□ 0.86
CDK4-201ENST00000257904 LIMCH1Q9UPQ0 1083 aa20.41■□□□□ 0.86
CDK4-201ENST00000257904 STX6O43752 255 aa20.4■□□□□ 0.86
CDK4-201ENST00000257904 LETM1O95202 739 aaPredicted RBP20.4■□□□□ 0.86
CDK4-201ENST00000257904 HOXC9P31274 260 aa20.4■□□□□ 0.86
CDK4-201ENST00000257904 UBE2HP62256 183 aa20.4■□□□□ 0.86
CDK4-201ENST00000257904 RUFY3Q7L099 469 aa20.4■□□□□ 0.86
CDK4-201ENST00000257904 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.4■□□□□ 0.86
CDK4-201ENST00000257904 TCHHQ07283 1943 aa20.4■□□□□ 0.86
CDK4-201ENST00000257904 CRYBG1Q9Y4K1 1723 aa20.4■□□□□ 0.86
CDK4-201ENST00000257904 SRGAP3O43295 1099 aa20.39■□□□□ 0.86
CDK4-201ENST00000257904 SYT1P21579 422 aa20.39■□□□□ 0.86
CDK4-201ENST00000257904 PSME1Q06323 249 aa20.39■□□□□ 0.86
CDK4-201ENST00000257904 PKNOX2Q96KN3 472 aa20.39■□□□□ 0.86
CDK4-201ENST00000257904 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.85
CDK4-201ENST00000257904 USP25Q9UHP3 1055 aa20.39■□□□□ 0.85
CDK4-201ENST00000257904 LMTK3Q96Q04 1460 aa20.39■□□□□ 0.85
CDK4-201ENST00000257904 USP54Q70EL1 1684 aa20.38■□□□□ 0.85
CDK4-201ENST00000257904 F13A1P00488 732 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms