RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 TRAPPC3LQ5T215 181 aa28.3■■■□□ 2.12
NXT1-201ENST00000254998 SNRPA1P09661 255 aaKnown RBP28.29■■■□□ 2.12
NXT1-201ENST00000254998 NCBP3Q53F19 620 aaKnown RBP28.29■■■□□ 2.12
NXT1-201ENST00000254998 SOS1Q07889 1333 aaPredicted RBP28.27■■■□□ 2.12
NXT1-201ENST00000254998 EIF4A1P60842 406 aaKnown RBP28.27■■■□□ 2.12
NXT1-201ENST00000254998 ARHGEF1Q92888 912 aaKnown RBP28.27■■■□□ 2.12
NXT1-201ENST00000254998 TSPYL4Q9UJ04 414 aa28.27■■■□□ 2.12
NXT1-201ENST00000254998 CCER2I3L3R5 266 aa28.26■■■□□ 2.11
NXT1-201ENST00000254998 ZBTB1Q9Y2K1 713 aa28.26■■■□□ 2.11
NXT1-201ENST00000254998 CHL1O00533 1208 aa28.25■■■□□ 2.11
NXT1-201ENST00000254998 DIEXFQ68CQ4 756 aaKnown RBP28.25■■■□□ 2.11
NXT1-201ENST00000254998 CCDC27Q2M243 656 aa28.24■■■□□ 2.11
NXT1-201ENST00000254998 USP16Q9Y5T5 823 aa28.24■■■□□ 2.11
NXT1-201ENST00000254998 C4AP0C0L4 1744 aa28.23■■■□□ 2.11
NXT1-201ENST00000254998 POLD1P28340 1107 aa28.23■■■□□ 2.11
NXT1-201ENST00000254998 RFC4P35249 363 aa28.23■■■□□ 2.11
NXT1-201ENST00000254998 CALD1Q05682 793 aaKnown RBP28.23■■■□□ 2.11
NXT1-201ENST00000254998 PPP1R1BQ9UD71 204 aaPredicted RBP28.23■■■□□ 2.11
NXT1-201ENST00000254998 PRAMEF22A3QJZ6 481 aa28.22■■■□□ 2.11
NXT1-201ENST00000254998 GIGYF1O75420 1035 aaPredicted RBP28.22■■■□□ 2.11
NXT1-201ENST00000254998 FAM9BQ8IZU0 186 aa28.22■■■□□ 2.11
NXT1-201ENST00000254998 EIF5P55010 431 aaKnown RBP28.21■■■□□ 2.11
NXT1-201ENST00000254998 MSL1Q68DK7 614 aa28.21■■■□□ 2.11
NXT1-201ENST00000254998 CFAP44Q96MT7 982 aa28.21■■■□□ 2.11
NXT1-201ENST00000254998 COL15A1P39059 1388 aa28.21■■■□□ 2.11
NXT1-201ENST00000254998 LAMB4A4D0S4 1761 aa28.2■■■□□ 2.11
NXT1-201ENST00000254998 ARXQ96QS3 562 aa28.2■■■□□ 2.1
NXT1-201ENST00000254998 USP42Q9H9J4 1324 aaKnown RBP28.19■■■□□ 2.1
NXT1-201ENST00000254998 A1BGP04217 495 aa28.19■■■□□ 2.1
NXT1-201ENST00000254998 ZNF853P0CG23 659 aa28.19■■■□□ 2.1
NXT1-201ENST00000254998 CANXP27824 592 aaKnown RBP28.19■■■□□ 2.1
NXT1-201ENST00000254998 IL6STP40189 918 aaPredicted RBP28.19■■■□□ 2.1
NXT1-201ENST00000254998 GYS1P13807 737 aa28.18■■■□□ 2.1
NXT1-201ENST00000254998 NLGN1Q8N2Q7 840 aa28.18■■■□□ 2.1
NXT1-201ENST00000254998 IFT57Q9NWB7 429 aa28.18■■■□□ 2.1
NXT1-201ENST00000254998 A0A087WZG4 1122 aa28.17■■■□□ 2.1
NXT1-201ENST00000254998 NGEFQ8N5V2 710 aa28.17■■■□□ 2.1
NXT1-201ENST00000254998 WWC1Q8IX03 1113 aa28.16■■■□□ 2.1
NXT1-201ENST00000254998 LAS1LQ9Y4W2 734 aaKnown RBP28.16■■■□□ 2.1
NXT1-201ENST00000254998 GNAI1P63096 354 aa28.15■■■□□ 2.1
NXT1-201ENST00000254998 SRP68Q9UHB9 627 aaKnown RBP28.15■■■□□ 2.1
NXT1-201ENST00000254998 NARFQ9UHQ1 456 aa28.15■■■□□ 2.1
NXT1-201ENST00000254998 ZPR1O75312 459 aa28.14■■■□□ 2.1
NXT1-201ENST00000254998 MBIPQ9NS73 344 aa28.13■■■□□ 2.09
NXT1-201ENST00000254998 NBPF26B4DH59 902 aa28.12■■■□□ 2.09
NXT1-201ENST00000254998 NBPF10Q6P3W6 841 aaKnown RBP28.12■■■□□ 2.09
NXT1-201ENST00000254998 NBPF15Q8N660 670 aa28.12■■■□□ 2.09
NXT1-201ENST00000254998 IL16Q14005 1332 aa28.12■■■□□ 2.09
NXT1-201ENST00000254998 ERBB4Q15303 1308 aa28.11■■■□□ 2.09
NXT1-201ENST00000254998 MMP10P09238 476 aa28.1■■■□□ 2.09
NXT1-201ENST00000254998 USPL1Q5W0Q7 1092 aa28.1■■■□□ 2.09
NXT1-201ENST00000254998 FHDC1Q9C0D6 1143 aaPredicted RBP28.1■■■□□ 2.09
NXT1-201ENST00000254998 HOXB7P09629 217 aa28.09■■■□□ 2.09
NXT1-201ENST00000254998 FKBP8Q14318 412 aa28.09■■■□□ 2.09
NXT1-201ENST00000254998 NPM2Q86SE8 214 aaKnown RBP28.09■■■□□ 2.09
NXT1-201ENST00000254998 SENP3-EIF4A1A0A087X0R7 540 aa28.08■■■□□ 2.09
NXT1-201ENST00000254998 PIP4K2AP48426 406 aaPredicted RBP28.08■■■□□ 2.09
NXT1-201ENST00000254998 MIER1Q8N108 512 aa28.08■■■□□ 2.09
NXT1-201ENST00000254998 WDR63Q8IWG1 891 aa28.07■■■□□ 2.08
NXT1-201ENST00000254998 SYT17Q9BSW7 474 aa28.07■■■□□ 2.08
NXT1-201ENST00000254998 BCL2L12Q9HB09 334 aa28.07■■■□□ 2.08
NXT1-201ENST00000254998 ZNF330Q9Y3S2 320 aaPredicted RBP28.07■■■□□ 2.08
NXT1-201ENST00000254998 SCN7AQ01118 1682 aa28.07■■■□□ 2.08
NXT1-201ENST00000254998 KRT24Q2M2I5 525 aa28.06■■■□□ 2.08
NXT1-201ENST00000254998 RGL2O15211 777 aa28.05■■■□□ 2.08
NXT1-201ENST00000254998 TM4SF1P30408 202 aa28.05■■■□□ 2.08
NXT1-201ENST00000254998 DZIP3Q86Y13 1208 aaKnown RBP28.05■■■□□ 2.08
NXT1-201ENST00000254998 TBC1D2BQ9UPU7 963 aa28.05■■■□□ 2.08
NXT1-201ENST00000254998 CAMTA2O94983 1202 aa28.04■■■□□ 2.08
NXT1-201ENST00000254998 CD2APQ9Y5K6 639 aa28.03■■■□□ 2.08
NXT1-201ENST00000254998 BCORQ6W2J9 1755 aa28.03■■■□□ 2.08
NXT1-201ENST00000254998 EIF2S2P20042 333 aaKnown RBP28.02■■■□□ 2.08
NXT1-201ENST00000254998 DUSP27Q5VZP5 1158 aa28.02■■■□□ 2.08
NXT1-201ENST00000254998 SALL2Q9Y467 1007 aaPredicted RBP28.02■■■□□ 2.08
NXT1-201ENST00000254998 PARP3Q9Y6F1 533 aa28.02■■■□□ 2.08
NXT1-201ENST00000254998 DDR1Q08345 913 aa28.01■■■□□ 2.07
NXT1-201ENST00000254998 PDIA6Q15084 440 aa28.01■■■□□ 2.07
NXT1-201ENST00000254998 NFIXQ14938 502 aa28■■■□□ 2.07
NXT1-201ENST00000254998 CLEC4GQ6UXB4 293 aa28■■■□□ 2.07
NXT1-201ENST00000254998 LRP10Q7Z4F1 713 aa28■■■□□ 2.07
NXT1-201ENST00000254998 ZNF521Q96K83 1311 aa27.99■■■□□ 2.07
NXT1-201ENST00000254998 POLRMTO00411 1230 aaKnown RBP27.99■■■□□ 2.07
NXT1-201ENST00000254998 MYL6BP14649 208 aa27.98■■■□□ 2.07
NXT1-201ENST00000254998 HDGFL1Q5TGJ6 251 aa27.98■■■□□ 2.07
NXT1-201ENST00000254998 TSR2Q969E8 191 aaKnown RBP27.98■■■□□ 2.07
NXT1-201ENST00000254998 KLHL34Q8N239 644 aa27.97■■■□□ 2.07
NXT1-201ENST00000254998 DDX21Q9NR30 783 aaKnown RBP eCLIP27.97■■■□□ 2.07
NXT1-201ENST00000254998 C10orf71Q711Q0 1435 aa27.97■■■□□ 2.07
NXT1-201ENST00000254998 KIF13BQ9NQT8 1826 aa27.97■■■□□ 2.07
NXT1-201ENST00000254998 C8orf58Q8NAV2 365 aa27.96■■■□□ 2.07
NXT1-201ENST00000254998 ZNF652Q9Y2D9 606 aa27.96■■■□□ 2.07
NXT1-201ENST00000254998 ERVV-1B6SEH8 477 aa27.95■■■□□ 2.06
NXT1-201ENST00000254998 PROSER3Q2NL68 480 aa27.95■■■□□ 2.06
NXT1-201ENST00000254998 TBC1D9BQ66K14 1250 aa27.95■■■□□ 2.06
NXT1-201ENST00000254998 CHMP4AQ9BY43 222 aa27.95■■■□□ 2.06
NXT1-201ENST00000254998 FANCIQ9NVI1 1328 aa27.94■■■□□ 2.06
NXT1-201ENST00000254998 NLGN2Q8NFZ4 835 aa27.94■■■□□ 2.06
NXT1-201ENST00000254998 NECTIN2Q92692 538 aa27.94■■■□□ 2.06
NXT1-201ENST00000254998 NRXN2Q9P2S2 1712 aa27.94■■■□□ 2.06
NXT1-201ENST00000254998 MAP3K15Q6ZN16 1313 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms