RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 PROSER3Q2NL68 480 aa15.52■□□□□ 0.07
NIP7-201ENST00000254940 VAMP4O75379 141 aa15.51■□□□□ 0.07
NIP7-201ENST00000254940 GIGYF1O75420 1035 aaPredicted RBP15.51■□□□□ 0.07
NIP7-201ENST00000254940 A1BGP04217 495 aa15.51■□□□□ 0.07
NIP7-201ENST00000254940 ARXQ96QS3 562 aa15.51■□□□□ 0.07
NIP7-201ENST00000254940 LRRC4BQ9NT99 713 aa15.51■□□□□ 0.07
NIP7-201ENST00000254940 CCNL1Q9UK58 526 aaPredicted RBP15.51■□□□□ 0.07
NIP7-201ENST00000254940 EZH2Q15910 746 aaKnown RBP15.5■□□□□ 0.07
NIP7-201ENST00000254940 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
NIP7-201ENST00000254940 HDGFL1Q5TGJ6 251 aa15.5■□□□□ 0.07
NIP7-201ENST00000254940 PAPPAQ13219 1627 aa15.5■□□□□ 0.07
NIP7-201ENST00000254940 CANXP27824 592 aaKnown RBP15.49■□□□□ 0.07
NIP7-201ENST00000254940 PROM2Q8N271 834 aa15.49■□□□□ 0.07
NIP7-201ENST00000254940 SSH1Q8WYL5 1049 aa15.49■□□□□ 0.07
NIP7-201ENST00000254940 CHPF2Q9P2E5 772 aa15.49■□□□□ 0.07
NIP7-201ENST00000254940 HEG1Q9ULI3 1381 aa15.49■□□□□ 0.07
NIP7-201ENST00000254940 UBR2Q8IWV8 1755 aa15.48■□□□□ 0.07
NIP7-201ENST00000254940 LINC00116Q8NCU8 138 aa15.48■□□□□ 0.07
NIP7-201ENST00000254940 RBM19Q9Y4C8 960 aaKnown RBP15.48■□□□□ 0.07
NIP7-201ENST00000254940 SNRPA1P09661 255 aaKnown RBP15.48■□□□□ 0.07
NIP7-201ENST00000254940 AIMP1Q12904 312 aaKnown RBP15.48■□□□□ 0.07
NIP7-201ENST00000254940 G2E3Q7L622 706 aa15.48■□□□□ 0.07
NIP7-201ENST00000254940 TNS1Q9HBL0 1735 aaKnown RBP15.48■□□□□ 0.07
NIP7-201ENST00000254940 SMC4Q9NTJ3 1288 aa15.47■□□□□ 0.07
NIP7-201ENST00000254940 PHAXQ9H814 394 aaKnown RBP15.47■□□□□ 0.07
NIP7-201ENST00000254940 COG6Q9Y2V7 657 aa15.47■□□□□ 0.07
NIP7-201ENST00000254940 SF3B2Q13435 895 aaKnown RBP15.46■□□□□ 0.07
NIP7-201ENST00000254940 AMIGO3Q86WK7 504 aa15.46■□□□□ 0.07
NIP7-201ENST00000254940 PHF14O94880 888 aa15.46■□□□□ 0.07
NIP7-201ENST00000254940 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
NIP7-201ENST00000254940 TXNRD1Q16881 649 aa15.46■□□□□ 0.07
NIP7-201ENST00000254940 SMARCC1Q92922 1105 aaPredicted RBP15.46■□□□□ 0.07
NIP7-201ENST00000254940 ZBTB1Q9Y2K1 713 aa15.45■□□□□ 0.06
NIP7-201ENST00000254940 TJP1Q07157 1748 aa15.45■□□□□ 0.06
NIP7-201ENST00000254940 MYH14Q7Z406 1995 aaKnown RBP15.45■□□□□ 0.06
NIP7-201ENST00000254940 NBPF26B4DH59 902 aa15.45■□□□□ 0.06
NIP7-201ENST00000254940 NBPF14Q5TI25 921 aa15.45■□□□□ 0.06
NIP7-201ENST00000254940 NBPF10Q6P3W6 841 aaKnown RBP15.45■□□□□ 0.06
NIP7-201ENST00000254940 NBPF15Q8N660 670 aa15.45■□□□□ 0.06
NIP7-201ENST00000254940 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
NIP7-201ENST00000254940 CYP19A1P11511 503 aaPredicted RBP15.44■□□□□ 0.06
NIP7-201ENST00000254940 CRKLP46109 303 aaKnown RBP15.44■□□□□ 0.06
NIP7-201ENST00000254940 UPF1Q92900 1129 aaKnown RBP eCLIP15.43■□□□□ 0.062e-6■■■■□ 24.1
NIP7-201ENST00000254940 NOB1Q9ULX3 412 aaKnown RBP15.42■□□□□ 0.06
NIP7-201ENST00000254940 LY75O60449 1722 aa15.42■□□□□ 0.06
NIP7-201ENST00000254940 F6X3S4 739 aa15.42■□□□□ 0.06
NIP7-201ENST00000254940 PDIA6Q15084 440 aa15.42■□□□□ 0.06
NIP7-201ENST00000254940 STK31Q9BXU1 1019 aa15.42■□□□□ 0.06
NIP7-201ENST00000254940 GNPATO15228 680 aa15.41■□□□□ 0.06
NIP7-201ENST00000254940 CCDC30Q5VVM6 783 aa15.41■□□□□ 0.06
NIP7-201ENST00000254940 INTS5Q6P9B9 1019 aaKnown RBP15.41■□□□□ 0.06
NIP7-201ENST00000254940 MRPL50Q8N5N7 158 aaKnown RBP15.41■□□□□ 0.06
NIP7-201ENST00000254940 ZNF827Q17R98 1081 aa15.41■□□□□ 0.06
NIP7-201ENST00000254940 CAMKK2Q96RR4 588 aa15.41■□□□□ 0.06
NIP7-201ENST00000254940 TBC1D2BQ9UPU7 963 aa15.41■□□□□ 0.06
NIP7-201ENST00000254940 STARD3NLO95772 234 aa15.4■□□□□ 0.06
NIP7-201ENST00000254940 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
NIP7-201ENST00000254940 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.4■□□□□ 0.06
NIP7-201ENST00000254940 XAGE3Q8WTP9 111 aa15.4■□□□□ 0.06
NIP7-201ENST00000254940 TAF1LQ8IZX4 1826 aa15.4■□□□□ 0.06
NIP7-201ENST00000254940 BAG6P46379 1132 aa15.39■□□□□ 0.05
NIP7-201ENST00000254940 ZBTB3Q9H5J0 574 aa15.39■□□□□ 0.05
NIP7-201ENST00000254940 ANO8Q9HCE9 1232 aaPredicted RBP15.39■□□□□ 0.05
NIP7-201ENST00000254940 CCDC87Q9NVE4 849 aa15.39■□□□□ 0.05
NIP7-201ENST00000254940 DAXXQ9UER7 740 aaPredicted RBP15.39■□□□□ 0.05
NIP7-201ENST00000254940 LAMB4A4D0S4 1761 aa15.39■□□□□ 0.05
NIP7-201ENST00000254940 MSH5O43196 834 aa15.39■□□□□ 0.05
NIP7-201ENST00000254940 COPS6Q7L5N1 327 aa15.39■□□□□ 0.05
NIP7-201ENST00000254940 TRIM27P14373 513 aa15.38■□□□□ 0.05
NIP7-201ENST00000254940 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
NIP7-201ENST00000254940 SLC4A10Q6U841 1118 aa15.38■□□□□ 0.05
NIP7-201ENST00000254940 VSIG10Q8N0Z9 540 aa15.38■□□□□ 0.05
NIP7-201ENST00000254940 AK7Q96M32 723 aa15.38■□□□□ 0.05
NIP7-201ENST00000254940 PDGFDQ9GZP0 370 aaPredicted RBP15.38■□□□□ 0.05
NIP7-201ENST00000254940 PLSCR1O15162 318 aa15.37■□□□□ 0.05
NIP7-201ENST00000254940 DBF4Q9UBU7 674 aaPredicted RBP15.37■□□□□ 0.05
NIP7-201ENST00000254940 SRP68Q9UHB9 627 aaKnown RBP15.37■□□□□ 0.05
NIP7-201ENST00000254940 COL5A3P25940 1745 aaPredicted RBP15.37■□□□□ 0.05
NIP7-201ENST00000254940 FLIIQ13045 1269 aa15.37■□□□□ 0.05
NIP7-201ENST00000254940 IGHDP01880 384 aa15.36■□□□□ 0.05
NIP7-201ENST00000254940 C4BP0C0L5 1744 aa15.36■□□□□ 0.05
NIP7-201ENST00000254940 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
NIP7-201ENST00000254940 TFCP2L1Q9NZI6 479 aa15.36■□□□□ 0.05
NIP7-201ENST00000254940 JARID2Q92833 1246 aaPredicted RBP15.35■□□□□ 0.05
NIP7-201ENST00000254940 SRCAPQ6ZRS2 3230 aa15.35■□□□□ 0.05
NIP7-201ENST00000254940 FAM177BA6PVY3 158 aa15.35■□□□□ 0.05
NIP7-201ENST00000254940 HOXB7P09629 217 aa15.35■□□□□ 0.05
NIP7-201ENST00000254940 TEX13AQ9BXU3 409 aaPredicted RBP15.35■□□□□ 0.05
NIP7-201ENST00000254940 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
NIP7-201ENST00000254940 LRP10Q7Z4F1 713 aa15.34■□□□□ 0.05
NIP7-201ENST00000254940 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
NIP7-201ENST00000254940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.34■□□□□ 0.05
NIP7-201ENST00000254940 PSDA5PKW4 1024 aaPredicted RBP15.34■□□□□ 0.05
NIP7-201ENST00000254940 HLFQ16534 295 aa15.34■□□□□ 0.05
NIP7-201ENST00000254940 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
NIP7-201ENST00000254940 SLC27A3Q5K4L6 730 aa15.34■□□□□ 0.05
NIP7-201ENST00000254940 BICDL1Q6ZP65 573 aa15.34■□□□□ 0.05
NIP7-201ENST00000254940 PCDHB15Q9Y5E8 787 aa15.34■□□□□ 0.05
NIP7-201ENST00000254940 ATP5J2-PTCD1G3V325 749 aa15.33■□□□□ 0.04
NIP7-201ENST00000254940 ALDH1L2Q3SY69 923 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms