RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 PROSER3Q2NL68 480 aa31.05■■■□□ 2.56
TMEM55B-201ENST00000250489 NBPF7P0C2Y1 421 aaPredicted RBP31.05■■■□□ 2.56
TMEM55B-201ENST00000250489 PPP1R42Q7Z4L9 355 aa31.04■■■□□ 2.56
TMEM55B-201ENST00000250489 TUBGCP6Q96RT7 1819 aa31.04■■■□□ 2.56
TMEM55B-201ENST00000250489 USP26Q9BXU7 913 aa31.03■■■□□ 2.56
TMEM55B-201ENST00000250489 SLC52A2Q9HAB3 445 aa31.03■■■□□ 2.56
TMEM55B-201ENST00000250489 CHMP5Q9NZZ3 219 aa31.03■■■□□ 2.56
TMEM55B-201ENST00000250489 MX1P20591 662 aa31.03■■■□□ 2.56
TMEM55B-201ENST00000250489 BRINP3Q76B58 766 aa31.03■■■□□ 2.56
TMEM55B-201ENST00000250489 HYPKQ9NX55 129 aa31.01■■■□□ 2.56
TMEM55B-201ENST00000250489 ZNF790Q6PG37 636 aa31.01■■■□□ 2.55
TMEM55B-201ENST00000250489 KSR2Q6VAB6 950 aa31.01■■■□□ 2.55
TMEM55B-201ENST00000250489 IFNL2Q8IZJ0 200 aa31.01■■■□□ 2.55
TMEM55B-201ENST00000250489 MAP3K2Q9Y2U5 619 aa31.01■■■□□ 2.55
TMEM55B-201ENST00000250489 PKD1L3Q7Z443 1732 aa31.01■■■□□ 2.55
TMEM55B-201ENST00000250489 STRCQ7RTU9 1775 aa31■■■□□ 2.55
TMEM55B-201ENST00000250489 STAP2Q9UGK3 403 aa31■■■□□ 2.55
TMEM55B-201ENST00000250489 RAB11FIP3O75154 756 aa30.99■■■□□ 2.55
TMEM55B-201ENST00000250489 RBM42Q9BTD8 480 aaKnown RBP30.99■■■□□ 2.55
TMEM55B-201ENST00000250489 ALDH1L1O75891 902 aa30.99■■■□□ 2.55
TMEM55B-201ENST00000250489 GSE1Q14687 1217 aa30.99■■■□□ 2.55
TMEM55B-201ENST00000250489 TSHZ3Q63HK5 1081 aa30.99■■■□□ 2.55
TMEM55B-201ENST00000250489 C5P01031 1676 aa30.98■■■□□ 2.55
TMEM55B-201ENST00000250489 MRC1P22897 1456 aa30.98■■■□□ 2.55
TMEM55B-201ENST00000250489 CD2BP2O95400 341 aaKnown RBP30.98■■■□□ 2.55
TMEM55B-201ENST00000250489 DDX21Q9NR30 783 aaKnown RBP eCLIP30.98■■■□□ 2.55
TMEM55B-201ENST00000250489 SRGAP3O43295 1099 aa30.97■■■□□ 2.55
TMEM55B-201ENST00000250489 HSP90AB1P08238 724 aaKnown RBP30.97■■■□□ 2.55
TMEM55B-201ENST00000250489 DDIT3P35638 169 aa30.97■■■□□ 2.55
TMEM55B-201ENST00000250489 SLC39A6Q13433 755 aa30.97■■■□□ 2.55
TMEM55B-201ENST00000250489 SURF6O75683 361 aaKnown RBP30.96■■■□□ 2.55
TMEM55B-201ENST00000250489 NFATC2IPQ8NCF5 419 aa30.96■■■□□ 2.55
TMEM55B-201ENST00000250489 PDIA6Q15084 440 aa30.96■■■□□ 2.55
TMEM55B-201ENST00000250489 AOX1Q06278 1338 aa30.95■■■□□ 2.55
TMEM55B-201ENST00000250489 ERC2O15083 957 aa30.95■■■□□ 2.54
TMEM55B-201ENST00000250489 CYP27B1O15528 508 aa30.95■■■□□ 2.54
TMEM55B-201ENST00000250489 REC8O95072 547 aa30.95■■■□□ 2.54
TMEM55B-201ENST00000250489 RABEP1Q15276 862 aa30.95■■■□□ 2.54
TMEM55B-201ENST00000250489 K7ELQ4 463 aaPredicted RBP30.94■■■□□ 2.54
TMEM55B-201ENST00000250489 DCAF5Q96JK2 942 aa30.94■■■□□ 2.54
TMEM55B-201ENST00000250489 IL1RAPL2Q9NP60 686 aa30.94■■■□□ 2.54
TMEM55B-201ENST00000250489 MTX1Q13505 466 aa30.93■■■□□ 2.54
TMEM55B-201ENST00000250489 RHPN1Q8TCX5 695 aa30.92■■■□□ 2.54
TMEM55B-201ENST00000250489 DDX58O95786 925 aaKnown RBP30.92■■■□□ 2.54
TMEM55B-201ENST00000250489 C9orf78Q9NZ63 289 aaPredicted RBP30.91■■■□□ 2.54
TMEM55B-201ENST00000250489 SOS2Q07890 1332 aaPredicted RBP30.91■■■□□ 2.54
TMEM55B-201ENST00000250489 LINS1Q8NG48 757 aa30.9■■■□□ 2.54
TMEM55B-201ENST00000250489 KIF1BPQ96EK5 621 aa30.9■■■□□ 2.54
TMEM55B-201ENST00000250489 CWF19L2Q2TBE0 894 aaKnown RBP30.9■■■□□ 2.54
TMEM55B-201ENST00000250489 ZNF496Q96IT1 587 aaPredicted RBP30.89■■■□□ 2.54
TMEM55B-201ENST00000250489 SLAIN2Q9P270 581 aa30.88■■■□□ 2.53
TMEM55B-201ENST00000250489 CIZ1Q9ULV3 898 aaPredicted RBP30.88■■■□□ 2.53
TMEM55B-201ENST00000250489 HSP90AB4PQ58FF6 505 aa30.88■■■□□ 2.53
TMEM55B-201ENST00000250489 NUTM1Q86Y26 1132 aa30.88■■■□□ 2.53
TMEM55B-201ENST00000250489 HDAC5Q9UQL6 1122 aa30.88■■■□□ 2.53
TMEM55B-201ENST00000250489 PARP4Q9UKK3 1724 aaKnown RBP30.88■■■□□ 2.53
TMEM55B-201ENST00000250489 ZNF335Q9H4Z2 1342 aaPredicted RBP30.87■■■□□ 2.53
TMEM55B-201ENST00000250489 AIMP1Q12904 312 aaKnown RBP30.87■■■□□ 2.53
TMEM55B-201ENST00000250489 TRIM6-TRIM34B2RNG4 842 aa30.86■■■□□ 2.53
TMEM55B-201ENST00000250489 ESYT1Q9BSJ8 1104 aa30.86■■■□□ 2.53
TMEM55B-201ENST00000250489 UTYO14607 1347 aa30.86■■■□□ 2.53
TMEM55B-201ENST00000250489 KDM4FA0A1W2PPD8 638 aa30.86■■■□□ 2.53
TMEM55B-201ENST00000250489 RILPL2Q969X0 211 aa30.86■■■□□ 2.53
TMEM55B-201ENST00000250489 PRDM11Q9NQV5 511 aa30.86■■■□□ 2.53
TMEM55B-201ENST00000250489 WDR17Q8IZU2 1322 aa30.86■■■□□ 2.53
TMEM55B-201ENST00000250489 CHMLP26374 656 aa30.85■■■□□ 2.53
TMEM55B-201ENST00000250489 MCM4P33991 863 aa30.85■■■□□ 2.53
TMEM55B-201ENST00000250489 TTC5Q8N0Z6 440 aa30.85■■■□□ 2.53
TMEM55B-201ENST00000250489 GRM8O00222 908 aa30.84■■■□□ 2.53
TMEM55B-201ENST00000250489 UNC5CLQ8IV45 518 aa30.84■■■□□ 2.53
TMEM55B-201ENST00000250489 SNRPA1P09661 255 aaKnown RBP30.83■■■□□ 2.53
TMEM55B-201ENST00000250489 HSP90AA1P07900 732 aaKnown RBP30.83■■■□□ 2.53
TMEM55B-201ENST00000250489 MYL6BP14649 208 aa30.83■■■□□ 2.53
TMEM55B-201ENST00000250489 LARP1Q6PKG0 1096 aaKnown RBP30.82■■■□□ 2.52
TMEM55B-201ENST00000250489 RIC3Q7Z5B4 369 aa30.82■■■□□ 2.52
TMEM55B-201ENST00000250489 PI4K2BQ8TCG2 481 aa30.82■■■□□ 2.52
TMEM55B-201ENST00000250489 FMNL2Q96PY5 1086 aa30.82■■■□□ 2.52
TMEM55B-201ENST00000250489 ABCA3Q99758 1704 aa30.82■■■□□ 2.52
TMEM55B-201ENST00000250489 COL5A2P05997 1499 aaPredicted RBP30.81■■■□□ 2.52
TMEM55B-201ENST00000250489 CABP4P57796 275 aa30.81■■■□□ 2.52
TMEM55B-201ENST00000250489 XAGE3Q8WTP9 111 aa30.81■■■□□ 2.52
TMEM55B-201ENST00000250489 IGKV5-2P06315 115 aa30.81■■■□□ 2.52
TMEM55B-201ENST00000250489 GLI3P10071 1580 aa30.8■■■□□ 2.52
TMEM55B-201ENST00000250489 LRP10Q7Z4F1 713 aa30.8■■■□□ 2.52
TMEM55B-201ENST00000250489 SUCLG2Q96I99 432 aa30.8■■■□□ 2.52
TMEM55B-201ENST00000250489 USP16Q9Y5T5 823 aa30.8■■■□□ 2.52
TMEM55B-201ENST00000250489 COPS6Q7L5N1 327 aa30.79■■■□□ 2.52
TMEM55B-201ENST00000250489 KAZALD1Q96I82 304 aa30.79■■■□□ 2.52
TMEM55B-201ENST00000250489 OS9Q13438 667 aaPredicted RBP30.79■■■□□ 2.52
TMEM55B-201ENST00000250489 TOM1L2Q6ZVM7 507 aa30.79■■■□□ 2.52
TMEM55B-201ENST00000250489 USP42Q9H9J4 1324 aaKnown RBP30.79■■■□□ 2.52
TMEM55B-201ENST00000250489 FOXD4L1Q9NU39 408 aa30.78■■■□□ 2.52
TMEM55B-201ENST00000250489 PCDH11XQ9BZA7 1347 aa30.77■■■□□ 2.52
TMEM55B-201ENST00000250489 PCDH11YQ9BZA8 1340 aa30.77■■■□□ 2.52
TMEM55B-201ENST00000250489 NEXNQ0ZGT2 675 aa30.77■■■□□ 2.52
TMEM55B-201ENST00000250489 RAB3GAP1Q15042 981 aa30.77■■■□□ 2.52
TMEM55B-201ENST00000250489 METTL22Q9BUU2 404 aaPredicted RBP30.77■■■□□ 2.52
TMEM55B-201ENST00000250489 LAMB4A4D0S4 1761 aa30.76■■■□□ 2.52
TMEM55B-201ENST00000250489 NEURL1BA8MQ27 555 aa30.76■■■□□ 2.51
TMEM55B-201ENST00000250489 ZCRB1Q8TBF4 217 aaKnown RBP30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms