RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 SHANK3Q9BYB0 1731 aa23.62■■□□□ 1.37
TNFSF9-201ENST00000245817 PRAMEF22A3QJZ6 481 aa23.62■■□□□ 1.37
TNFSF9-201ENST00000245817 F6X3S4 739 aa23.62■■□□□ 1.37
TNFSF9-201ENST00000245817 PHAXQ9H814 394 aaKnown RBP23.62■■□□□ 1.37
TNFSF9-201ENST00000245817 HYPKQ9NX55 129 aa23.62■■□□□ 1.37
TNFSF9-201ENST00000245817 GLI3P10071 1580 aa23.62■■□□□ 1.37
TNFSF9-201ENST00000245817 A0A0G2JS52 829 aa23.6■■□□□ 1.37
TNFSF9-201ENST00000245817 ONECUT3O60422 494 aaPredicted RBP23.6■■□□□ 1.37
TNFSF9-201ENST00000245817 MYT1Q01538 1121 aa23.6■■□□□ 1.37
TNFSF9-201ENST00000245817 CACNA1FO60840 1977 aa23.6■■□□□ 1.37
TNFSF9-201ENST00000245817 DDX21Q9NR30 783 aaKnown RBP eCLIP23.6■■□□□ 1.37
TNFSF9-201ENST00000245817 ANXA1P04083 346 aa23.57■■□□□ 1.36
TNFSF9-201ENST00000245817 DDX58O95786 925 aaKnown RBP23.57■■□□□ 1.36
TNFSF9-201ENST00000245817 HDAC1Q13547 482 aaPredicted RBP23.57■■□□□ 1.36
TNFSF9-201ENST00000245817 SEPT12Q8IYM1 358 aa23.57■■□□□ 1.36
TNFSF9-201ENST00000245817 PIGBQ92521 554 aa23.57■■□□□ 1.36
TNFSF9-201ENST00000245817 SYTL4Q96C24 671 aaPredicted RBP23.57■■□□□ 1.36
TNFSF9-201ENST00000245817 USP16Q9Y5T5 823 aa23.57■■□□□ 1.36
TNFSF9-201ENST00000245817 WNK3Q9BYP7 1800 aa23.56■■□□□ 1.36
TNFSF9-201ENST00000245817 PTCD1O75127 700 aaKnown RBP23.56■■□□□ 1.36
TNFSF9-201ENST00000245817 DNAAF4Q8WXU2 420 aa23.54■■□□□ 1.36
TNFSF9-201ENST00000245817 PI4KAP2A4QPH2 592 aa23.54■■□□□ 1.36
TNFSF9-201ENST00000245817 PROSER3Q2NL68 480 aa23.54■■□□□ 1.36
TNFSF9-201ENST00000245817 PI4KAP1Q8N8J0 262 aa23.54■■□□□ 1.36
TNFSF9-201ENST00000245817 C1orf115Q9H7X2 142 aa23.54■■□□□ 1.36
TNFSF9-201ENST00000245817 MYL6BP14649 208 aa23.53■■□□□ 1.36
TNFSF9-201ENST00000245817 PXDNLA1KZ92 1463 aa23.52■■□□□ 1.36
TNFSF9-201ENST00000245817 PDIA6Q15084 440 aa23.52■■□□□ 1.36
TNFSF9-201ENST00000245817 SRCIN1Q9C0H9 1055 aa23.52■■□□□ 1.36
TNFSF9-201ENST00000245817 GNAI3P08754 354 aa23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 PRIM1P49642 420 aaKnown RBP23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 AIMP1Q12904 312 aaKnown RBP23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 KSR2Q6VAB6 950 aa23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 MARCH10Q8NA82 808 aaPredicted RBP23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 TEX13AQ9BXU3 409 aaPredicted RBP23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 ASAP1Q9ULH1 1129 aa23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 ERBB4Q15303 1308 aa23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 MEIS3Q99687 375 aa23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 ATG3Q9NT62 314 aa23.51■■□□□ 1.35
TNFSF9-201ENST00000245817 BCL9O00512 1426 aa23.5■■□□□ 1.35
TNFSF9-201ENST00000245817 TOGARAM1Q9Y4F4 1720 aa23.5■■□□□ 1.35
TNFSF9-201ENST00000245817 VSIG10Q8N0Z9 540 aa23.5■■□□□ 1.35
TNFSF9-201ENST00000245817 RBM42Q9BTD8 480 aaKnown RBP23.5■■□□□ 1.35
TNFSF9-201ENST00000245817 MAP3K2Q9Y2U5 619 aa23.49■■□□□ 1.35
TNFSF9-201ENST00000245817 THSD7AQ9UPZ6 1657 aa23.49■■□□□ 1.35
TNFSF9-201ENST00000245817 C5P01031 1676 aa23.48■■□□□ 1.35
TNFSF9-201ENST00000245817 KCPQ6ZWJ8 1503 aa23.48■■□□□ 1.35
TNFSF9-201ENST00000245817 RIC3Q7Z5B4 369 aa23.48■■□□□ 1.35
TNFSF9-201ENST00000245817 RPAP2Q8IXW5 612 aaPredicted RBP23.48■■□□□ 1.35
TNFSF9-201ENST00000245817 GNAI2P04899 355 aa23.48■■□□□ 1.35
TNFSF9-201ENST00000245817 XAGE3Q8WTP9 111 aa23.48■■□□□ 1.35
TNFSF9-201ENST00000245817 PAPPAQ13219 1627 aa23.47■■□□□ 1.35
TNFSF9-201ENST00000245817 COPS6Q7L5N1 327 aa23.47■■□□□ 1.35
TNFSF9-201ENST00000245817 ADCY9O60503 1353 aa23.46■■□□□ 1.35
TNFSF9-201ENST00000245817 BEND3Q5T5X7 828 aa23.46■■□□□ 1.35
TNFSF9-201ENST00000245817 KRT27Q7Z3Y8 459 aa23.46■■□□□ 1.35
TNFSF9-201ENST00000245817 ACSBG1Q96GR2 724 aa23.46■■□□□ 1.35
TNFSF9-201ENST00000245817 STARD3NLO95772 234 aa23.45■■□□□ 1.34
TNFSF9-201ENST00000245817 GCC1Q96CN9 775 aa23.45■■□□□ 1.34
TNFSF9-201ENST00000245817 UBR2Q8IWV8 1755 aa23.45■■□□□ 1.34
TNFSF9-201ENST00000245817 UBTFL1P0CB47 393 aaPredicted RBP23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 RGS3P49796 1198 aa23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 NEXNQ0ZGT2 675 aa23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 ATP10DQ9P241 1426 aa23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 ALDH1L1O75891 902 aa23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 ANKRD13DQ6ZTN6 518 aa23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 SMC5Q8IY18 1101 aa23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 ANKRD44Q8N8A2 993 aa23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 TSHZ2Q9NRE2 1034 aa23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 PDZRN3Q9UPQ7 1066 aa23.44■■□□□ 1.34
TNFSF9-201ENST00000245817 BRWD3Q6RI45 1802 aa23.43■■□□□ 1.34
TNFSF9-201ENST00000245817 HMMRO75330 724 aa23.43■■□□□ 1.34
TNFSF9-201ENST00000245817 ITGB4P16144 1822 aa23.43■■□□□ 1.34
TNFSF9-201ENST00000245817 A1BGP04217 495 aa23.42■■□□□ 1.34
TNFSF9-201ENST00000245817 CEP85Q6P2H3 762 aa23.42■■□□□ 1.34
TNFSF9-201ENST00000245817 SKAP1Q86WV1 359 aa23.42■■□□□ 1.34
TNFSF9-201ENST00000245817 USP44Q9H0E7 712 aa23.42■■□□□ 1.34
TNFSF9-201ENST00000245817 HDAC5Q9UQL6 1122 aa23.42■■□□□ 1.34
TNFSF9-201ENST00000245817 LAMB4A4D0S4 1761 aa23.42■■□□□ 1.34
TNFSF9-201ENST00000245817 SIRT2Q8IXJ6 389 aa23.41■■□□□ 1.34
TNFSF9-201ENST00000245817 LINS1Q8NG48 757 aa23.41■■□□□ 1.34
TNFSF9-201ENST00000245817 KAT6BQ8WYB5 2073 aa23.41■■□□□ 1.34
TNFSF9-201ENST00000245817 LRP10Q7Z4F1 713 aa23.41■■□□□ 1.34
TNFSF9-201ENST00000245817 DNAJC10Q8IXB1 793 aa23.41■■□□□ 1.34
TNFSF9-201ENST00000245817 C9orf78Q9NZ63 289 aaPredicted RBP23.4■■□□□ 1.34
TNFSF9-201ENST00000245817 DOT1LQ8TEK3 1739 aa23.39■■□□□ 1.34
TNFSF9-201ENST00000245817 NBPF26B4DH59 902 aa23.39■■□□□ 1.34
TNFSF9-201ENST00000245817 NBPF14Q5TI25 921 aa23.39■■□□□ 1.34
TNFSF9-201ENST00000245817 NBPF10Q6P3W6 841 aaKnown RBP23.39■■□□□ 1.34
TNFSF9-201ENST00000245817 NBPF15Q8N660 670 aa23.39■■□□□ 1.34
TNFSF9-201ENST00000245817 PLBD2Q8NHP8 589 aa23.39■■□□□ 1.34
TNFSF9-201ENST00000245817 SMARCC1Q92922 1105 aaPredicted RBP23.39■■□□□ 1.34
TNFSF9-201ENST00000245817 METTL22Q9BUU2 404 aaPredicted RBP23.39■■□□□ 1.34
TNFSF9-201ENST00000245817 ZBTB47Q9UFB7 747 aaPredicted RBP23.38■■□□□ 1.33
TNFSF9-201ENST00000245817 FAM182BQ5T319 152 aa23.38■■□□□ 1.33
TNFSF9-201ENST00000245817 LRRFIP2Q9Y608 721 aaKnown RBP23.38■■□□□ 1.33
TNFSF9-201ENST00000245817 MYD88Q99836 296 aa23.37■■□□□ 1.33
TNFSF9-201ENST00000245817 FAM196AQ6ZSG2 479 aa23.36■■□□□ 1.33
TNFSF9-201ENST00000245817 N4BP2Q86UW6 1770 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms