RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 PDE4BQ07343 736 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 CDCA7LQ96GN5 454 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 KIAA1328Q86T90 577 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 MYD88Q99836 296 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 GBP3Q9H0R5 595 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 BCAR3O75815 825 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 CCDC91Q7Z6B0 441 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 CCDC148Q8NFR7 591 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 DRC1Q96MC2 740 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 SEPT11Q9NVA2 429 aaKnown RBP8.55□□□□□ -1.04
SSR1-201ENST00000244763 CALRP27797 417 aaKnown RBP8.54□□□□□ -1.04
SSR1-201ENST00000244763 ANAPC15P60006 121 aa8.54□□□□□ -1.04
SSR1-201ENST00000244763 FERMT1Q9BQL6 677 aa8.54□□□□□ -1.04
SSR1-201ENST00000244763 KIF2AO00139 706 aaPredicted RBP8.54□□□□□ -1.04
SSR1-201ENST00000244763 ADAMTS2O95450 1211 aa8.54□□□□□ -1.04
SSR1-201ENST00000244763 ENOX2Q16206 610 aaKnown RBP8.54□□□□□ -1.04
SSR1-201ENST00000244763 SMARCC1Q92922 1105 aaPredicted RBP8.54□□□□□ -1.04
SSR1-201ENST00000244763 CCDC112Q8NEF3 446 aa8.54□□□□□ -1.04
SSR1-201ENST00000244763 SCAND2PQ9GZW5 306 aaPredicted RBP8.54□□□□□ -1.04
SSR1-201ENST00000244763 CWC25Q9NXE8 425 aaPredicted RBP8.54□□□□□ -1.04
SSR1-201ENST00000244763 UQCRFS1P1P0C7P4 283 aa8.54□□□□□ -1.04
SSR1-201ENST00000244763 KANK3Q6NY19 840 aa8.54□□□□□ -1.04
SSR1-201ENST00000244763 SLC12A7Q9Y666 1083 aa8.54□□□□□ -1.04
SSR1-201ENST00000244763 B4DLN1 442 aa8.54□□□□□ -1.04
SSR1-201ENST00000244763 MRPL12P52815 198 aaKnown RBP8.54□□□□□ -1.04
SSR1-201ENST00000244763 SSRP1Q08945 709 aaKnown RBP8.53□□□□□ -1.04
SSR1-201ENST00000244763 SPA17Q15506 151 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 CCDC96Q2M329 555 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 CACNA2D4Q7Z3S7 1137 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 TEX14Q8IWB6 1497 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 EVI5LQ96CN4 794 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 CALML4Q96GE6 196 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 ANO10Q9NW15 660 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 IL1RAPL2Q9NP60 686 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 HDAC9Q9UKV0 1011 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 MAP3K11Q16584 847 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 C8orf76Q96K31 380 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 TCP11L1Q9NUJ3 509 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 FOXO3O43524 673 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 DNAAF4Q8WXU2 420 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 CCDC97Q96F63 343 aaPredicted RBP8.53□□□□□ -1.04
SSR1-201ENST00000244763 XPCQ01831 940 aaPredicted RBP8.53□□□□□ -1.04
SSR1-201ENST00000244763 TMTC2Q8N394 836 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 KIAA0754O94854 1291 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 CASTP20810 708 aaKnown RBP8.53□□□□□ -1.04
SSR1-201ENST00000244763 SLFN5Q08AF3 891 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 ARHGEF11O15085 1522 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 ABCA10Q8WWZ4 1543 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 MAP4K4O95819 1239 aaPredicted RBP8.53□□□□□ -1.04
SSR1-201ENST00000244763 NLRP5P59047 1200 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 CCDC152Q4G0S7 254 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 WAPLQ7Z5K2 1190 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 CCDC83Q8IWF9 413 aa8.53□□□□□ -1.04
SSR1-201ENST00000244763 LDHAL6AQ6ZMR3 332 aa8.52□□□□□ -1.04
SSR1-201ENST00000244763 LRRC45Q96CN5 670 aa8.52□□□□□ -1.04
SSR1-201ENST00000244763 FEZ1Q99689 392 aa8.52□□□□□ -1.04
SSR1-201ENST00000244763 PTPN23Q9H3S7 1636 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 MX1P20591 662 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 WDR78Q5VTH9 848 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 USP37Q86T82 979 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 NYXQ9GZU5 481 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 TSPYL1Q9H0U9 437 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 CAMSAP2Q08AD1 1489 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 SPDYE4A6NLX3 237 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 IFIT3O14879 490 aaKnown RBP8.52□□□□□ -1.05
SSR1-201ENST00000244763 PLB1Q6P1J6 1458 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 CCDC194A0A1B0GVG4 234 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 ZSCAN12O43309 604 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
SSR1-201ENST00000244763 USO1O60763 962 aaKnown RBP8.52□□□□□ -1.05
SSR1-201ENST00000244763 SNRPA1P09661 255 aaKnown RBP8.52□□□□□ -1.05
SSR1-201ENST00000244763 TAOK3Q9H2K8 898 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 NCOA1Q15788 1441 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 NPHP3Q7Z494 1330 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 PAXIP1Q6ZW49 1069 aaPredicted RBP8.52□□□□□ -1.05
SSR1-201ENST00000244763 BOLA2Q9H3K6 86 aa8.52□□□□□ -1.05
SSR1-201ENST00000244763 DHX29Q7Z478 1369 aaKnown RBP8.51□□□□□ -1.05
SSR1-201ENST00000244763 SSR1P43307 286 aaKnown RBP8.51□□□□□ -1.05
SSR1-201ENST00000244763 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 ARHGAP29Q52LW3 1261 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 FERMT2Q96AC1 680 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 LRRFIP2Q9Y608 721 aaKnown RBP8.51□□□□□ -1.05
SSR1-201ENST00000244763 NBPF7P0C2Y1 421 aaPredicted RBP8.51□□□□□ -1.05
SSR1-201ENST00000244763 SKIDA1Q1XH10 827 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 MAP9Q49MG5 647 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 ZFYP08048 801 aaPredicted RBP8.51□□□□□ -1.05
SSR1-201ENST00000244763 CCDC172P0C7W6 258 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 CFAP100Q494V2 611 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 TMEM57Q8N5G2 664 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 GNAQP50148 359 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 SPC24Q8NBT2 197 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 CRNKL1Q9BZJ0 848 aaKnown RBP8.51□□□□□ -1.05
SSR1-201ENST00000244763 STAMBPO95630 424 aa8.51□□□□□ -1.05
SSR1-201ENST00000244763 KAT14Q9H8E8 782 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 HMG20BQ9P0W2 317 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 NKTRP30414 1462 aaKnown RBP8.5□□□□□ -1.05
SSR1-201ENST00000244763 FAM114A1Q8IWE2 563 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 DDX12PQ92771 950 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 SETDB2Q96T68 719 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms