RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 PDIA6Q15084 440 aa22.53■■□□□ 1.2
KLHDC3-201ENST00000244670 C8orf34Q49A92 452 aa22.53■■□□□ 1.2
KLHDC3-201ENST00000244670 TMOD3Q9NYL9 352 aa22.53■■□□□ 1.2
KLHDC3-201ENST00000244670 SPATA31A5Q5VU36 1347 aa22.53■■□□□ 1.2
KLHDC3-201ENST00000244670 SPATA31A7Q8IWB4 1347 aa22.53■■□□□ 1.2
KLHDC3-201ENST00000244670 NGLY1Q96IV0 654 aa22.53■■□□□ 1.2
KLHDC3-201ENST00000244670 DDX21Q9NR30 783 aaKnown RBP eCLIP22.53■■□□□ 1.2
KLHDC3-201ENST00000244670 ITGB4P16144 1822 aa22.53■■□□□ 1.2
KLHDC3-201ENST00000244670 TNS2Q63HR2 1409 aa22.53■■□□□ 1.2
KLHDC3-201ENST00000244670 ADCY9O60503 1353 aa22.52■■□□□ 1.2
KLHDC3-201ENST00000244670 MYL6BP14649 208 aa22.52■■□□□ 1.2
KLHDC3-201ENST00000244670 PIP4K2AP48426 406 aaPredicted RBP22.52■■□□□ 1.2
KLHDC3-201ENST00000244670 SMC5Q8IY18 1101 aa22.52■■□□□ 1.2
KLHDC3-201ENST00000244670 HYPKQ9NX55 129 aa22.52■■□□□ 1.2
KLHDC3-201ENST00000244670 ATP10DQ9P241 1426 aa22.52■■□□□ 1.2
KLHDC3-201ENST00000244670 LAMB4A4D0S4 1761 aa22.52■■□□□ 1.2
KLHDC3-201ENST00000244670 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.19
KLHDC3-201ENST00000244670 AIMP1Q12904 312 aaKnown RBP22.51■■□□□ 1.19
KLHDC3-201ENST00000244670 FAM161AQ3B820 660 aa22.51■■□□□ 1.19
KLHDC3-201ENST00000244670 DNAAF4Q8WXU2 420 aa22.51■■□□□ 1.19
KLHDC3-201ENST00000244670 THRAP3Q9Y2W1 955 aaKnown RBP22.51■■□□□ 1.19
KLHDC3-201ENST00000244670 LRP6O75581 1613 aa22.51■■□□□ 1.19
KLHDC3-201ENST00000244670 PTCD1O75127 700 aaKnown RBP22.51■■□□□ 1.19
KLHDC3-201ENST00000244670 UNC5CLQ8IV45 518 aa22.5■■□□□ 1.19
KLHDC3-201ENST00000244670 HSPA1LP34931 641 aa22.49■■□□□ 1.19
KLHDC3-201ENST00000244670 DDB1Q16531 1140 aa22.49■■□□□ 1.19
KLHDC3-201ENST00000244670 PIGBQ92521 554 aa22.49■■□□□ 1.19
KLHDC3-201ENST00000244670 CDCA7Q9BWT1 371 aaPredicted RBP22.49■■□□□ 1.19
KLHDC3-201ENST00000244670 CEP85Q6P2H3 762 aa22.49■■□□□ 1.19
KLHDC3-201ENST00000244670 SRCIN1Q9C0H9 1055 aa22.49■■□□□ 1.19
KLHDC3-201ENST00000244670 MAP3K2Q9Y2U5 619 aa22.49■■□□□ 1.19
KLHDC3-201ENST00000244670 ANKRD44Q8N8A2 993 aa22.48■■□□□ 1.19
KLHDC3-201ENST00000244670 BCL9LQ86UU0 1499 aa22.47■■□□□ 1.19
KLHDC3-201ENST00000244670 BEND3Q5T5X7 828 aa22.47■■□□□ 1.19
KLHDC3-201ENST00000244670 KSR2Q6VAB6 950 aa22.47■■□□□ 1.19
KLHDC3-201ENST00000244670 SYTL4Q96C24 671 aaPredicted RBP22.47■■□□□ 1.19
KLHDC3-201ENST00000244670 ASAP1Q9ULH1 1129 aa22.47■■□□□ 1.19
KLHDC3-201ENST00000244670 SPATA31A6Q5VVP1 1343 aa22.47■■□□□ 1.19
KLHDC3-201ENST00000244670 DOT1LQ8TEK3 1739 aa22.47■■□□□ 1.19
KLHDC3-201ENST00000244670 GNAI2P04899 355 aa22.46■■□□□ 1.19
KLHDC3-201ENST00000244670 ANP32AP39687 249 aaKnown RBP22.46■■□□□ 1.19
KLHDC3-201ENST00000244670 MYT1Q01538 1121 aa22.46■■□□□ 1.19
KLHDC3-201ENST00000244670 ERICH6Q7L0X2 663 aa22.46■■□□□ 1.19
KLHDC3-201ENST00000244670 RPAP2Q8IXW5 612 aaPredicted RBP22.46■■□□□ 1.19
KLHDC3-201ENST00000244670 GNAI3P08754 354 aa22.45■■□□□ 1.18
KLHDC3-201ENST00000244670 XAGE3Q8WTP9 111 aa22.45■■□□□ 1.18
KLHDC3-201ENST00000244670 GCC1Q96CN9 775 aa22.45■■□□□ 1.18
KLHDC3-201ENST00000244670 USP44Q9H0E7 712 aa22.45■■□□□ 1.18
KLHDC3-201ENST00000244670 DDX58O95786 925 aaKnown RBP22.44■■□□□ 1.18
KLHDC3-201ENST00000244670 BARGINQ6ZT62 677 aa22.44■■□□□ 1.18
KLHDC3-201ENST00000244670 COPS6Q7L5N1 327 aa22.44■■□□□ 1.18
KLHDC3-201ENST00000244670 NPM2Q86SE8 214 aaKnown RBP22.44■■□□□ 1.18
KLHDC3-201ENST00000244670 NUCB1Q02818 461 aa22.43■■□□□ 1.18
KLHDC3-201ENST00000244670 FAM98CQ17RN3 349 aaKnown RBP22.43■■□□□ 1.18
KLHDC3-201ENST00000244670 LNPKQ9C0E8 428 aa22.43■■□□□ 1.18
KLHDC3-201ENST00000244670 LRRFIP2Q9Y608 721 aaKnown RBP22.43■■□□□ 1.18
KLHDC3-201ENST00000244670 A0A0G2JS52 829 aa22.43■■□□□ 1.18
KLHDC3-201ENST00000244670 UBTFL1P0CB47 393 aaPredicted RBP22.43■■□□□ 1.18
KLHDC3-201ENST00000244670 ANKRD45Q5TZF3 282 aa22.43■■□□□ 1.18
KLHDC3-201ENST00000244670 LRP10Q7Z4F1 713 aa22.43■■□□□ 1.18
KLHDC3-201ENST00000244670 ATG3Q9NT62 314 aa22.43■■□□□ 1.18
KLHDC3-201ENST00000244670 BCL9O00512 1426 aa22.42■■□□□ 1.18
KLHDC3-201ENST00000244670 VPS72Q15906 364 aa22.42■■□□□ 1.18
KLHDC3-201ENST00000244670 RIC3Q7Z5B4 369 aa22.42■■□□□ 1.18
KLHDC3-201ENST00000244670 MARCH10Q8NA82 808 aaPredicted RBP22.42■■□□□ 1.18
KLHDC3-201ENST00000244670 PRIM1P49642 420 aaKnown RBP22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 CHD1LQ86WJ1 897 aa22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 FNBP4Q8N3X1 1017 aaPredicted RBP22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 USP21Q9UK80 565 aa22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 NBPF26B4DH59 902 aa22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 CWF19L2Q2TBE0 894 aaKnown RBP22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 NBPF14Q5TI25 921 aa22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 MEX3CQ5U5Q3 659 aaKnown RBP22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 NBPF10Q6P3W6 841 aaKnown RBP22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 NBPF15Q8N660 670 aa22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 RBM42Q9BTD8 480 aaKnown RBP22.41■■□□□ 1.18
KLHDC3-201ENST00000244670 A1BGP04217 495 aa22.4■■□□□ 1.18
KLHDC3-201ENST00000244670 NBPF7P0C2Y1 421 aaPredicted RBP22.4■■□□□ 1.18
KLHDC3-201ENST00000244670 ACSBG1Q96GR2 724 aa22.4■■□□□ 1.18
KLHDC3-201ENST00000244670 DCTPP1Q9H773 170 aa22.4■■□□□ 1.18
KLHDC3-201ENST00000244670 BCL11AQ9H165 835 aa22.39■■□□□ 1.17
KLHDC3-201ENST00000244670 HMMRO75330 724 aa22.38■■□□□ 1.17
KLHDC3-201ENST00000244670 ANKRD13DQ6ZTN6 518 aa22.37■■□□□ 1.17
KLHDC3-201ENST00000244670 DNAJC10Q8IXB1 793 aa22.37■■□□□ 1.17
KLHDC3-201ENST00000244670 ERBB4Q15303 1308 aa22.37■■□□□ 1.17
KLHDC3-201ENST00000244670 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.37■■□□□ 1.17
KLHDC3-201ENST00000244670 PNMA6EA0A0J9YXQ4 647 aa22.37■■□□□ 1.17
KLHDC3-201ENST00000244670 APBB1O00213 710 aa22.37■■□□□ 1.17
KLHDC3-201ENST00000244670 ALDH1L1O75891 902 aa22.37■■□□□ 1.17
KLHDC3-201ENST00000244670 IPO9Q96P70 1041 aaKnown RBP22.37■■□□□ 1.17
KLHDC3-201ENST00000244670 ARFGEF2Q9Y6D5 1785 aa22.37■■□□□ 1.17
KLHDC3-201ENST00000244670 LINS1Q8NG48 757 aa22.36■■□□□ 1.17
KLHDC3-201ENST00000244670 MYD88Q99836 296 aa22.36■■□□□ 1.17
KLHDC3-201ENST00000244670 ATP8B2P98198 1209 aa22.35■■□□□ 1.17
KLHDC3-201ENST00000244670 C9orf78Q9NZ63 289 aaPredicted RBP22.35■■□□□ 1.17
KLHDC3-201ENST00000244670 IGKV5-2P06315 115 aa22.35■■□□□ 1.17
KLHDC3-201ENST00000244670 NEXNQ0ZGT2 675 aa22.34■■□□□ 1.17
KLHDC3-201ENST00000244670 VSIG10Q8N0Z9 540 aa22.34■■□□□ 1.17
KLHDC3-201ENST00000244670 METTL22Q9BUU2 404 aaPredicted RBP22.34■■□□□ 1.17
KLHDC3-201ENST00000244670 TTLL7Q6ZT98 887 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms