RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TM4SF1P30408 202 aa18.86■□□□□ 0.61
DDX39A-201ENST00000242776 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
DDX39A-201ENST00000242776 TNS4Q8IZW8 715 aa18.86■□□□□ 0.61
DDX39A-201ENST00000242776 JMYQ8N9B5 988 aa18.86■□□□□ 0.61
DDX39A-201ENST00000242776 SMC1BQ8NDV3 1235 aa18.86■□□□□ 0.61
DDX39A-201ENST00000242776 SLC39A6Q13433 755 aa18.85■□□□□ 0.61
DDX39A-201ENST00000242776 PCNTO95613 3336 aa18.84■□□□□ 0.61
DDX39A-201ENST00000242776 TIAM2Q8IVF5 1701 aa18.84■□□□□ 0.61
DDX39A-201ENST00000242776 PRELPP51888 382 aa18.84■□□□□ 0.61
DDX39A-201ENST00000242776 NFIXQ14938 502 aa18.84■□□□□ 0.61
DDX39A-201ENST00000242776 LGR6Q9HBX8 967 aa18.84■□□□□ 0.61
DDX39A-201ENST00000242776 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.6
DDX39A-201ENST00000242776 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
DDX39A-201ENST00000242776 SOS1Q07889 1333 aaPredicted RBP18.82■□□□□ 0.6
DDX39A-201ENST00000242776 DLEC1Q9Y238 1755 aa18.82■□□□□ 0.6
DDX39A-201ENST00000242776 CYP19A1P11511 503 aaPredicted RBP18.81■□□□□ 0.6
DDX39A-201ENST00000242776 C2CD5Q86YS7 1000 aa18.81■□□□□ 0.6
DDX39A-201ENST00000242776 SLC52A2Q9HAB3 445 aa18.81■□□□□ 0.6
DDX39A-201ENST00000242776 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
DDX39A-201ENST00000242776 COL15A1P39059 1388 aa18.8■□□□□ 0.6
DDX39A-201ENST00000242776 SERPINB2P05120 415 aa18.8■□□□□ 0.6
DDX39A-201ENST00000242776 LMNB1P20700 586 aa18.8■□□□□ 0.6
DDX39A-201ENST00000242776 CARMIL3Q8ND23 1372 aa18.8■□□□□ 0.6
DDX39A-201ENST00000242776 HMOX1P09601 288 aa18.79■□□□□ 0.6
DDX39A-201ENST00000242776 HSPA1AP0DMV8 641 aaKnown RBP18.79■□□□□ 0.6
DDX39A-201ENST00000242776 HSPA1BP0DMV9 641 aaKnown RBP18.79■□□□□ 0.6
DDX39A-201ENST00000242776 VEGFAP15692 232 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-201ENST00000242776 CANXP27824 592 aaKnown RBP18.79■□□□□ 0.6
DDX39A-201ENST00000242776 AKAP4Q5JQC9 854 aa18.79■□□□□ 0.6
DDX39A-201ENST00000242776 CCDC24Q8N4L8 307 aa18.79■□□□□ 0.6
DDX39A-201ENST00000242776 NARFQ9UHQ1 456 aa18.79■□□□□ 0.6
DDX39A-201ENST00000242776 NRXN2Q9P2S2 1712 aa18.78■□□□□ 0.6
DDX39A-201ENST00000242776 GLTPD2A6NH11 291 aa18.78■□□□□ 0.6
DDX39A-201ENST00000242776 HSPA5P11021 654 aaKnown RBP18.78■□□□□ 0.6
DDX39A-201ENST00000242776 IL13P35225 146 aa18.78■□□□□ 0.6
DDX39A-201ENST00000242776 TTLL6Q8N841 843 aa18.78■□□□□ 0.6
DDX39A-201ENST00000242776 BCL2L12Q9HB09 334 aa18.78■□□□□ 0.6
DDX39A-201ENST00000242776 CACNA1SQ13698 1873 aa18.78■□□□□ 0.6
DDX39A-201ENST00000242776 RNMTO43148 476 aaKnown RBP18.77■□□□□ 0.6
DDX39A-201ENST00000242776 H0YIN7 160 aa18.77■□□□□ 0.59
DDX39A-201ENST00000242776 ZNF622Q969S3 477 aaKnown RBP eCLIP18.77■□□□□ 0.591e-9■□□□□ 10.8
DDX39A-201ENST00000242776 ZNF330Q9Y3S2 320 aaPredicted RBP18.77■□□□□ 0.59
DDX39A-201ENST00000242776 NFKBIEO00221 500 aa18.76■□□□□ 0.59
DDX39A-201ENST00000242776 ANKRD31Q8N7Z5 1873 aa18.75■□□□□ 0.59
DDX39A-201ENST00000242776 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.59
DDX39A-201ENST00000242776 ZC3H4Q9UPT8 1303 aaKnown RBP18.74■□□□□ 0.59
DDX39A-201ENST00000242776 C21orf2O43822 256 aa18.73■□□□□ 0.59
DDX39A-201ENST00000242776 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
DDX39A-201ENST00000242776 COL11A2P13942 1736 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-201ENST00000242776 POTECB2RU33 542 aa18.72■□□□□ 0.59
DDX39A-201ENST00000242776 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
DDX39A-201ENST00000242776 MRC1P22897 1456 aa18.72■□□□□ 0.59
DDX39A-201ENST00000242776 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
DDX39A-201ENST00000242776 CNGB1Q14028 1251 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-201ENST00000242776 TBC1D9BQ66K14 1250 aa18.71■□□□□ 0.59
DDX39A-201ENST00000242776 MKRN1Q9UHC7 482 aaKnown RBP18.71■□□□□ 0.59
DDX39A-201ENST00000242776 UBR2Q8IWV8 1755 aa18.71■□□□□ 0.59
DDX39A-201ENST00000242776 ERFEQ4G0M1 354 aa18.71■□□□□ 0.59
DDX39A-201ENST00000242776 DPY19L2Q6NUT2 758 aa18.71■□□□□ 0.59
DDX39A-201ENST00000242776 TBC1D2BQ9UPU7 963 aa18.71■□□□□ 0.59
DDX39A-201ENST00000242776 FER1L6Q2WGJ9 1857 aa18.7■□□□□ 0.58
DDX39A-201ENST00000242776 NPHP1O15259 732 aa18.69■□□□□ 0.58
DDX39A-201ENST00000242776 POTEIP0CG38 1075 aa18.69■□□□□ 0.58
DDX39A-201ENST00000242776 POTEJP0CG39 1038 aa18.69■□□□□ 0.58
DDX39A-201ENST00000242776 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
DDX39A-201ENST00000242776 SLX4Q8IY92 1834 aa18.67■□□□□ 0.58
DDX39A-201ENST00000242776 DDNO94850 711 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-201ENST00000242776 STARD3NLO95772 234 aa18.67■□□□□ 0.58
DDX39A-201ENST00000242776 SCN7AQ01118 1682 aa18.67■□□□□ 0.58
DDX39A-201ENST00000242776 EIF5P55010 431 aaKnown RBP18.66■□□□□ 0.58
DDX39A-201ENST00000242776 PRR5LQ6MZQ0 368 aa18.66■□□□□ 0.58
DDX39A-201ENST00000242776 VSIG10Q8N0Z9 540 aa18.66■□□□□ 0.58
DDX39A-201ENST00000242776 A0A087WZG4 1122 aa18.65■□□□□ 0.58
DDX39A-201ENST00000242776 PDE6BP35913 854 aa18.65■□□□□ 0.58
DDX39A-201ENST00000242776 ZNF496Q96IT1 587 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-201ENST00000242776 CHADLQ6NUI6 762 aa18.65■□□□□ 0.58
DDX39A-201ENST00000242776 BRIP1Q9BX63 1249 aa18.65■□□□□ 0.58
DDX39A-201ENST00000242776 DIAPH1O60610 1272 aaKnown RBP18.64■□□□□ 0.57
DDX39A-201ENST00000242776 A1BGP04217 495 aa18.64■□□□□ 0.57
DDX39A-201ENST00000242776 AMER1Q5JTC6 1135 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-201ENST00000242776 CC2D1BQ5T0F9 858 aaKnown RBP18.64■□□□□ 0.57
DDX39A-201ENST00000242776 TAOK3Q9H2K8 898 aa18.64■□□□□ 0.57
DDX39A-201ENST00000242776 PIP4K2AP48426 406 aaPredicted RBP18.63■□□□□ 0.57
DDX39A-201ENST00000242776 TEFQ10587 303 aa18.63■□□□□ 0.57
DDX39A-201ENST00000242776 U2SURPO15042 1029 aaKnown RBP18.62■□□□□ 0.57
DDX39A-201ENST00000242776 CNBD1Q8NA66 436 aa18.62■□□□□ 0.57
DDX39A-201ENST00000242776 SETDB2Q96T68 719 aa18.62■□□□□ 0.57
DDX39A-201ENST00000242776 CREBZFQ9NS37 354 aa18.62■□□□□ 0.57
DDX39A-201ENST00000242776 HEG1Q9ULI3 1381 aa18.61■□□□□ 0.57
DDX39A-201ENST00000242776 PRPF40BQ6NWY9 871 aaKnown RBP18.61■□□□□ 0.57
DDX39A-201ENST00000242776 NPM2Q86SE8 214 aaKnown RBP18.61■□□□□ 0.57
DDX39A-201ENST00000242776 SIPA1L3O60292 1781 aaPredicted RBP18.6■□□□□ 0.57
DDX39A-201ENST00000242776 FOXN1O15353 648 aa18.6■□□□□ 0.57
DDX39A-201ENST00000242776 ZNF790Q6PG37 636 aa18.6■□□□□ 0.57
DDX39A-201ENST00000242776 IL17REQ8NFR9 667 aa18.6■□□□□ 0.57
DDX39A-201ENST00000242776 ST5P78524 1137 aa18.59■□□□□ 0.57
DDX39A-201ENST00000242776 EAPPQ56P03 285 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-201ENST00000242776 KCNQ3O43525 872 aa18.58■□□□□ 0.57
DDX39A-201ENST00000242776 CNKSR1Q969H4 720 aa18.58■□□□□ 0.57
DDX39A-201ENST00000242776 ARFGEF2Q9Y6D5 1785 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms