RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 NFE2L2Q16236 605 aa22.18■■□□□ 1.14
CLTA-201ENST00000242285 ARHGEF1Q92888 912 aaKnown RBP22.18■■□□□ 1.14
CLTA-201ENST00000242285 TEX13AQ9BXU3 409 aaPredicted RBP22.18■■□□□ 1.14
CLTA-201ENST00000242285 CCDC87Q9NVE4 849 aa22.18■■□□□ 1.14
CLTA-201ENST00000242285 C10orf71Q711Q0 1435 aa22.17■■□□□ 1.14
CLTA-201ENST00000242285 ZNF316A6NFI3 1004 aaPredicted RBP22.17■■□□□ 1.14
CLTA-201ENST00000242285 BTBD11A6QL63 1104 aa22.17■■□□□ 1.14
CLTA-201ENST00000242285 ZNF496Q96IT1 587 aaPredicted RBP22.17■■□□□ 1.14
CLTA-201ENST00000242285 FMNL2Q96PY5 1086 aa22.17■■□□□ 1.14
CLTA-201ENST00000242285 LAMB4A4D0S4 1761 aa22.17■■□□□ 1.14
CLTA-201ENST00000242285 RFC4P35249 363 aa22.16■■□□□ 1.14
CLTA-201ENST00000242285 MCM10Q7L590 875 aa22.16■■□□□ 1.14
CLTA-201ENST00000242285 PXDNLA1KZ92 1463 aa22.15■■□□□ 1.14
CLTA-201ENST00000242285 SOS1Q07889 1333 aaPredicted RBP22.15■■□□□ 1.14
CLTA-201ENST00000242285 STARD3NLO95772 234 aa22.15■■□□□ 1.14
CLTA-201ENST00000242285 GYS1P13807 737 aa22.15■■□□□ 1.14
CLTA-201ENST00000242285 GPBP1L1Q9HC44 474 aaPredicted RBP22.14■■□□□ 1.13
CLTA-201ENST00000242285 USP42Q9H9J4 1324 aaKnown RBP22.13■■□□□ 1.13
CLTA-201ENST00000242285 TAF7Q15545 349 aaPredicted RBP22.13■■□□□ 1.13
CLTA-201ENST00000242285 AFDNP55196 1824 aaKnown RBP22.12■■□□□ 1.13
CLTA-201ENST00000242285 COL15A1P39059 1388 aa22.12■■□□□ 1.13
CLTA-201ENST00000242285 KIAA1551Q9HCM1 1747 aa22.11■■□□□ 1.13
CLTA-201ENST00000242285 SCN7AQ01118 1682 aa22.11■■□□□ 1.13
CLTA-201ENST00000242285 DCTN1Q14203 1278 aa22.11■■□□□ 1.13
CLTA-201ENST00000242285 WDR43Q15061 677 aaKnown RBP eCLIP22.11■■□□□ 1.13
CLTA-201ENST00000242285 PNISRQ8TF01 805 aaKnown RBP22.11■■□□□ 1.13
CLTA-201ENST00000242285 ZBTB1Q9Y2K1 713 aa22.11■■□□□ 1.13
CLTA-201ENST00000242285 PARP3Q9Y6F1 533 aa22.11■■□□□ 1.13
CLTA-201ENST00000242285 BRCA1P38398 1863 aaKnown RBP22.1■■□□□ 1.13
CLTA-201ENST00000242285 BCORQ6W2J9 1755 aa22.1■■□□□ 1.13
CLTA-201ENST00000242285 NRXN2Q9P2S2 1712 aa22.09■■□□□ 1.13
CLTA-201ENST00000242285 LMOD3Q0VAK6 560 aa22.09■■□□□ 1.13
CLTA-201ENST00000242285 KCNQ3O43525 872 aa22.08■■□□□ 1.13
CLTA-201ENST00000242285 EIF5P55010 431 aaKnown RBP22.08■■□□□ 1.13
CLTA-201ENST00000242285 NARFQ9UHQ1 456 aa22.08■■□□□ 1.13
CLTA-201ENST00000242285 ZPR1O75312 459 aa22.07■■□□□ 1.12
CLTA-201ENST00000242285 SNRPA1P09661 255 aaKnown RBP22.07■■□□□ 1.12
CLTA-201ENST00000242285 TMPOP42166 694 aaKnown RBP22.07■■□□□ 1.12
CLTA-201ENST00000242285 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
CLTA-201ENST00000242285 A0A087WZG4 1122 aa22.06■■□□□ 1.12
CLTA-201ENST00000242285 IL6STP40189 918 aaPredicted RBP22.06■■□□□ 1.12
CLTA-201ENST00000242285 RIPK4P57078 832 aa22.06■■□□□ 1.12
CLTA-201ENST00000242285 BABAM1Q9NWV8 329 aa22.06■■□□□ 1.12
CLTA-201ENST00000242285 N4BP2Q86UW6 1770 aaPredicted RBP22.06■■□□□ 1.12
CLTA-201ENST00000242285 SRP68Q9UHB9 627 aaKnown RBP22.05■■□□□ 1.12
CLTA-201ENST00000242285 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
CLTA-201ENST00000242285 BCS1LQ9Y276 419 aa22.04■■□□□ 1.12
CLTA-201ENST00000242285 A0A0G2JLW4 131 aa22.03■■□□□ 1.12
CLTA-201ENST00000242285 CANXP27824 592 aaKnown RBP22.03■■□□□ 1.12
CLTA-201ENST00000242285 FKBP8Q14318 412 aa22.03■■□□□ 1.12
CLTA-201ENST00000242285 ARFGEF1Q9Y6D6 1849 aa22.02■■□□□ 1.12
CLTA-201ENST00000242285 DPEP1P16444 411 aa22.02■■□□□ 1.12
CLTA-201ENST00000242285 TM4SF1P30408 202 aa22.02■■□□□ 1.12
CLTA-201ENST00000242285 WWC3Q9ULE0 1092 aa22.02■■□□□ 1.12
CLTA-201ENST00000242285 USP16Q9Y5T5 823 aa22.02■■□□□ 1.12
CLTA-201ENST00000242285 USPL1Q5W0Q7 1092 aa22.01■■□□□ 1.11
CLTA-201ENST00000242285 DLEC1Q9Y238 1755 aa22■■□□□ 1.11
CLTA-201ENST00000242285 A1BGP04217 495 aa22■■□□□ 1.11
CLTA-201ENST00000242285 KCNA3P22001 575 aa22■■□□□ 1.11
CLTA-201ENST00000242285 CCDC146Q8IYE0 955 aa22■■□□□ 1.11
CLTA-201ENST00000242285 THUMPD2Q9BTF0 503 aaKnown RBP22■■□□□ 1.11
CLTA-201ENST00000242285 PIM2Q9P1W9 311 aa22■■□□□ 1.11
CLTA-201ENST00000242285 NUP98P52948 1817 aa21.99■■□□□ 1.11
CLTA-201ENST00000242285 CEP350Q5VT06 3117 aa21.99■■□□□ 1.11
CLTA-201ENST00000242285 HSPA6P17066 643 aa21.99■■□□□ 1.11
CLTA-201ENST00000242285 EIF4A1P60842 406 aaKnown RBP21.99■■□□□ 1.11
CLTA-201ENST00000242285 BCL2L12Q9HB09 334 aa21.99■■□□□ 1.11
CLTA-201ENST00000242285 MIS18AQ9NYP9 233 aa21.99■■□□□ 1.11
CLTA-201ENST00000242285 POLRMTO00411 1230 aaKnown RBP21.98■■□□□ 1.11
CLTA-201ENST00000242285 RGL2O15211 777 aa21.98■■□□□ 1.11
CLTA-201ENST00000242285 DDR1Q08345 913 aa21.98■■□□□ 1.11
CLTA-201ENST00000242285 NPM2Q86SE8 214 aaKnown RBP21.98■■□□□ 1.11
CLTA-201ENST00000242285 ZNF526Q8TF50 670 aaPredicted RBP21.98■■□□□ 1.11
CLTA-201ENST00000242285 PRAMEF22A3QJZ6 481 aa21.97■■□□□ 1.11
CLTA-201ENST00000242285 KIF3CO14782 793 aa21.97■■□□□ 1.11
CLTA-201ENST00000242285 ANP32CO43423 234 aa21.97■■□□□ 1.11
CLTA-201ENST00000242285 TRIM35Q9UPQ4 493 aa21.97■■□□□ 1.11
CLTA-201ENST00000242285 NFIXQ14938 502 aa21.96■■□□□ 1.11
CLTA-201ENST00000242285 DALRD3Q5D0E6 543 aaKnown RBP21.96■■□□□ 1.11
CLTA-201ENST00000242285 ARHGAP27Q6ZUM4 889 aa21.96■■□□□ 1.11
CLTA-201ENST00000242285 ANKRD31Q8N7Z5 1873 aa21.95■■□□□ 1.1
CLTA-201ENST00000242285 TSPYL4Q9UJ04 414 aa21.95■■□□□ 1.1
CLTA-201ENST00000242285 RRP7AQ9Y3A4 280 aaKnown RBP21.94■■□□□ 1.1
CLTA-201ENST00000242285 ERBB4Q15303 1308 aa21.94■■□□□ 1.1
CLTA-201ENST00000242285 NBPF26B4DH59 902 aa21.93■■□□□ 1.1
CLTA-201ENST00000242285 CAMTA2O94983 1202 aa21.93■■□□□ 1.1
CLTA-201ENST00000242285 NEUROD2Q15784 382 aa21.93■■□□□ 1.1
CLTA-201ENST00000242285 NBPF10Q6P3W6 841 aaKnown RBP21.93■■□□□ 1.1
CLTA-201ENST00000242285 CLEC4GQ6UXB4 293 aa21.93■■□□□ 1.1
CLTA-201ENST00000242285 NBPF15Q8N660 670 aa21.93■■□□□ 1.1
CLTA-201ENST00000242285 CHL1O00533 1208 aa21.92■■□□□ 1.1
CLTA-201ENST00000242285 TOMM70O94826 608 aa21.92■■□□□ 1.1
CLTA-201ENST00000242285 DZIP3Q86Y13 1208 aaKnown RBP21.92■■□□□ 1.1
CLTA-201ENST00000242285 TBC1D2BQ9UPU7 963 aa21.92■■□□□ 1.1
CLTA-201ENST00000242285 ZNF330Q9Y3S2 320 aaPredicted RBP21.92■■□□□ 1.1
CLTA-201ENST00000242285 CARMIL3Q8ND23 1372 aa21.9■■□□□ 1.1
CLTA-201ENST00000242285 ZC3H4Q9UPT8 1303 aaKnown RBP21.9■■□□□ 1.1
CLTA-201ENST00000242285 CCDC184Q52MB2 194 aa21.9■■□□□ 1.1
CLTA-201ENST00000242285 APAF1O14727 1248 aa21.89■■□□□ 1.09
CLTA-201ENST00000242285 SERPINB2P05120 415 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms