RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 SH2B1Q9NRF2 756 aaPredicted RBP20.14■□□□□ 0.81
SLC1A4-201ENST00000234256 GNL3LQ9NVN8 582 aaKnown RBP20.14■□□□□ 0.81
SLC1A4-201ENST00000234256 TXLNAP40222 546 aa20.14■□□□□ 0.81
SLC1A4-201ENST00000234256 CFAP100Q494V2 611 aa20.14■□□□□ 0.81
SLC1A4-201ENST00000234256 GPTP24298 496 aa20.13■□□□□ 0.81
SLC1A4-201ENST00000234256 HAND2P61296 217 aa20.13■□□□□ 0.81
SLC1A4-201ENST00000234256 GOLIM4O00461 696 aa20.13■□□□□ 0.81
SLC1A4-201ENST00000234256 PIP4K2AP48426 406 aaPredicted RBP20.13■□□□□ 0.81
SLC1A4-201ENST00000234256 CTDP1Q9Y5B0 961 aaPredicted RBP20.13■□□□□ 0.81
SLC1A4-201ENST00000234256 CCDC43Q96MW1 224 aaKnown RBP20.13■□□□□ 0.81
SLC1A4-201ENST00000234256 CHPF2Q9P2E5 772 aa20.13■□□□□ 0.81
SLC1A4-201ENST00000234256 TTC21BQ7Z4L5 1316 aa20.13■□□□□ 0.81
SLC1A4-201ENST00000234256 MINDY4BA8MYZ0 360 aa20.12■□□□□ 0.81
SLC1A4-201ENST00000234256 CHRNA2Q15822 529 aa20.12■□□□□ 0.81
SLC1A4-201ENST00000234256 LRRC2Q9BYS8 371 aa20.12■□□□□ 0.81
SLC1A4-201ENST00000234256 SAMD9Q5K651 1589 aa20.12■□□□□ 0.81
SLC1A4-201ENST00000234256 SYCP2Q9BX26 1530 aa20.12■□□□□ 0.81
SLC1A4-201ENST00000234256 PATL2C9JE40 543 aaKnown RBP20.12■□□□□ 0.81
SLC1A4-201ENST00000234256 GIMAP6Q6P9H5 292 aa20.12■□□□□ 0.81
SLC1A4-201ENST00000234256 SLC39A6Q13433 755 aa20.12■□□□□ 0.81
SLC1A4-201ENST00000234256 RUFY1Q96T51 708 aa20.12■□□□□ 0.81
SLC1A4-201ENST00000234256 ZSCAN25Q6NSZ9 544 aa20.11■□□□□ 0.81
SLC1A4-201ENST00000234256 PPFIBP1Q86W92 1011 aa20.11■□□□□ 0.81
SLC1A4-201ENST00000234256 ZGPATQ8N5A5 531 aaKnown RBP20.11■□□□□ 0.81
SLC1A4-201ENST00000234256 BIN1O00499 593 aa20.11■□□□□ 0.81
SLC1A4-201ENST00000234256 KAT6BQ8WYB5 2073 aa20.11■□□□□ 0.81
SLC1A4-201ENST00000234256 PLCH2O75038 1416 aa20.11■□□□□ 0.81
SLC1A4-201ENST00000234256 EPS15P42566 896 aa20.11■□□□□ 0.81
SLC1A4-201ENST00000234256 MEX3CQ5U5Q3 659 aaKnown RBP20.11■□□□□ 0.81
SLC1A4-201ENST00000234256 DDX46Q7L014 1031 aaKnown RBP20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 C8orf76Q96K31 380 aa20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 ZSCAN23Q3MJ62 389 aa20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 HYPKQ9NX55 129 aa20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 SLC3A2P08195 630 aaKnown RBP20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 ZHX3Q9H4I2 956 aa20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 KLHL10Q6JEL2 608 aa20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 CDK5RAP3Q96JB5 506 aa20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 ZNF830Q96NB3 372 aaPredicted RBP20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 PA2G4Q9UQ80 394 aaKnown RBP20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 PZPP20742 1482 aa20.1■□□□□ 0.81
SLC1A4-201ENST00000234256 MTHFSDQ2M296 383 aaKnown RBP20.09■□□□□ 0.81
SLC1A4-201ENST00000234256 OTUD7AQ8TE49 926 aaPredicted RBP20.09■□□□□ 0.81
SLC1A4-201ENST00000234256 EVI5LQ96CN4 794 aa20.09■□□□□ 0.81
SLC1A4-201ENST00000234256 TRMT1Q9NXH9 659 aaKnown RBP20.09■□□□□ 0.81
SLC1A4-201ENST00000234256 CDKL5O76039 1030 aa20.09■□□□□ 0.81
SLC1A4-201ENST00000234256 ESYT1Q9BSJ8 1104 aa20.09■□□□□ 0.81
SLC1A4-201ENST00000234256 SMARCE1Q969G3 411 aa20.09■□□□□ 0.81
SLC1A4-201ENST00000234256 ADCY5O95622 1261 aa20.08■□□□□ 0.81
SLC1A4-201ENST00000234256 MAGEC2Q9UBF1 373 aaPredicted RBP20.08■□□□□ 0.81
SLC1A4-201ENST00000234256 STARD3NLO95772 234 aa20.08■□□□□ 0.8
SLC1A4-201ENST00000234256 C16orf45Q96MC5 204 aaPredicted RBP20.08■□□□□ 0.8
SLC1A4-201ENST00000234256 DCTPP1Q9H773 170 aa20.08■□□□□ 0.8
SLC1A4-201ENST00000234256 IFIT5Q13325 482 aaKnown RBP20.08■□□□□ 0.8
SLC1A4-201ENST00000234256 ISM2Q6H9L7 571 aa20.08■□□□□ 0.8
SLC1A4-201ENST00000234256 EIF4G3O43432 1585 aaKnown RBP20.07■□□□□ 0.8
SLC1A4-201ENST00000234256 DENND4BO75064 1496 aaPredicted RBP20.07■□□□□ 0.8
SLC1A4-201ENST00000234256 DTNBO60941 627 aa20.07■□□□□ 0.8
SLC1A4-201ENST00000234256 RRP9O43818 475 aaKnown RBP20.07■□□□□ 0.8
SLC1A4-201ENST00000234256 POLR3DP05423 398 aaPredicted RBP20.07■□□□□ 0.8
SLC1A4-201ENST00000234256 SSBP05455 408 aaKnown RBP eCLIP20.07■□□□□ 0.8
SLC1A4-201ENST00000234256 PLEKHM2Q8IWE5 1019 aa20.07■□□□□ 0.8
SLC1A4-201ENST00000234256 BRF1Q92994 677 aa20.07■□□□□ 0.8
SLC1A4-201ENST00000234256 ZNF165P49910 485 aa20.06■□□□□ 0.8
SLC1A4-201ENST00000234256 CEP85Q6P2H3 762 aa20.06■□□□□ 0.8
SLC1A4-201ENST00000234256 NAPBQ9H115 298 aa20.06■□□□□ 0.8
SLC1A4-201ENST00000234256 SFPQP23246 707 aaKnown RBP eCLIP20.06■□□□□ 0.8
SLC1A4-201ENST00000234256 CCDC144CPQ8IYA2 1237 aa20.06■□□□□ 0.8
SLC1A4-201ENST00000234256 PBRM1Q86U86 1689 aa20.06■□□□□ 0.8
SLC1A4-201ENST00000234256 FSIP1Q8NA03 581 aa20.06■□□□□ 0.8
SLC1A4-201ENST00000234256 CNPY2Q9Y2B0 182 aa20.06■□□□□ 0.8
SLC1A4-201ENST00000234256 KLHL34Q8N239 644 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 PDCL2Q8N4E4 241 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 ACBD3Q9H3P7 528 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 TMOD3Q9NYL9 352 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 KRT18P05783 430 aaKnown RBP20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 G2E3Q7L622 706 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 TRMT112Q9UI30 125 aaKnown RBP20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 PIK3R4Q99570 1358 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 GOLGA8BA8MQT2 603 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 ZNF213O14771 459 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 LRRC59Q96AG4 307 aaKnown RBP20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 PRDM10Q9NQV6 1147 aa20.05■□□□□ 0.8
SLC1A4-201ENST00000234256 A0A1W2PP64 1363 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 ZBTB7BO15156 539 aaPredicted RBP20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 ATP8B2P98198 1209 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 NUP160Q12769 1436 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 CT47A1Q5JQC4 288 aaPredicted RBP20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 ANKRD13DQ6ZTN6 518 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 KRT28Q7Z3Y7 464 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 ANKRD24Q8TF21 1146 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 CLIP2Q9UDT6 1046 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 PRIM1P49642 420 aaKnown RBP20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 PTPN14Q15678 1187 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 LDHAL6AQ6ZMR3 332 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 ANO10Q9NW15 660 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 DISP1Q96F81 1524 aa20.04■□□□□ 0.8
SLC1A4-201ENST00000234256 IGHMBP2P38935 993 aaKnown RBP20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 NEK1Q96PY6 1258 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms