RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 SMIM5Q71RC9 77 aa19.44■□□□□ 0.7
RPA3-201ENST00000223129 AKT1S1Q96B36 256 aa19.44■□□□□ 0.7
RPA3-201ENST00000223129 STARD3NLO95772 234 aa19.43■□□□□ 0.7
RPA3-201ENST00000223129 A1BGP04217 495 aa19.43■□□□□ 0.7
RPA3-201ENST00000223129 EIF2S2P20042 333 aaKnown RBP19.43■□□□□ 0.7
RPA3-201ENST00000223129 NECTIN2Q92692 538 aa19.43■□□□□ 0.7
RPA3-201ENST00000223129 CICQ96RK0 1608 aaPredicted RBP19.43■□□□□ 0.7
RPA3-201ENST00000223129 MYH14Q7Z406 1995 aaKnown RBP19.43■□□□□ 0.7
RPA3-201ENST00000223129 PIP4K2AP48426 406 aaPredicted RBP19.42■□□□□ 0.7
RPA3-201ENST00000223129 NBPF14Q5TI25 921 aa19.42■□□□□ 0.7
RPA3-201ENST00000223129 INTS5Q6P9B9 1019 aaKnown RBP19.42■□□□□ 0.7
RPA3-201ENST00000223129 TRMT2AQ8IZ69 625 aaKnown RBP19.42■□□□□ 0.7
RPA3-201ENST00000223129 SLC15A2Q16348 729 aa19.42■□□□□ 0.7
RPA3-201ENST00000223129 AMIGO3Q86WK7 504 aa19.42■□□□□ 0.7
RPA3-201ENST00000223129 AK7Q96M32 723 aa19.42■□□□□ 0.7
RPA3-201ENST00000223129 STK32BQ9NY57 414 aa19.41■□□□□ 0.7
RPA3-201ENST00000223129 CNTNAP4Q9C0A0 1308 aa19.41■□□□□ 0.7
RPA3-201ENST00000223129 GNPATO15228 680 aa19.41■□□□□ 0.7
RPA3-201ENST00000223129 CANXP27824 592 aaKnown RBP19.41■□□□□ 0.7
RPA3-201ENST00000223129 RC3H1Q5TC82 1133 aaKnown RBP19.41■□□□□ 0.7
RPA3-201ENST00000223129 CCDC87Q9NVE4 849 aa19.41■□□□□ 0.7
RPA3-201ENST00000223129 TFCP2L1Q9NZI6 479 aa19.41■□□□□ 0.7
RPA3-201ENST00000223129 ZBTB1Q9Y2K1 713 aa19.41■□□□□ 0.7
RPA3-201ENST00000223129 TWISTNBQ3B726 338 aaPredicted RBP19.4■□□□□ 0.7
RPA3-201ENST00000223129 LAMB4A4D0S4 1761 aa19.39■□□□□ 0.69
RPA3-201ENST00000223129 HMGB2P26583 209 aaKnown RBP19.39■□□□□ 0.69
RPA3-201ENST00000223129 PHF14O94880 888 aa19.38■□□□□ 0.69
RPA3-201ENST00000223129 HOXB7P09629 217 aa19.38■□□□□ 0.69
RPA3-201ENST00000223129 R3HDM1Q15032 1099 aaKnown RBP19.38■□□□□ 0.69
RPA3-201ENST00000223129 HDGFL1Q5TGJ6 251 aa19.38■□□□□ 0.69
RPA3-201ENST00000223129 NBPF26B4DH59 902 aa19.37■□□□□ 0.69
RPA3-201ENST00000223129 VAMP4O75379 141 aa19.37■□□□□ 0.69
RPA3-201ENST00000223129 NBPF10Q6P3W6 841 aaKnown RBP19.37■□□□□ 0.69
RPA3-201ENST00000223129 NBPF15Q8N660 670 aa19.37■□□□□ 0.69
RPA3-201ENST00000223129 PSDA5PKW4 1024 aaPredicted RBP19.37■□□□□ 0.69
RPA3-201ENST00000223129 RPS6KA4O75676 772 aa19.37■□□□□ 0.69
RPA3-201ENST00000223129 RTCBQ9Y3I0 505 aaKnown RBP19.37■□□□□ 0.69
RPA3-201ENST00000223129 ZNF330Q9Y3S2 320 aaPredicted RBP19.37■□□□□ 0.69
RPA3-201ENST00000223129 TUBGCP6Q96RT7 1819 aa19.36■□□□□ 0.69
RPA3-201ENST00000223129 TCERG1O14776 1098 aaKnown RBP19.36■□□□□ 0.69
RPA3-201ENST00000223129 ANXA1P04083 346 aa19.36■□□□□ 0.69
RPA3-201ENST00000223129 UBR3Q6ZT12 1888 aa19.36■□□□□ 0.69
RPA3-201ENST00000223129 MYL6BP14649 208 aa19.35■□□□□ 0.69
RPA3-201ENST00000223129 PDGFDQ9GZP0 370 aaPredicted RBP19.35■□□□□ 0.69
RPA3-201ENST00000223129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.35■□□□□ 0.69
RPA3-201ENST00000223129 PDIA6Q15084 440 aa19.35■□□□□ 0.69
RPA3-201ENST00000223129 PROSER3Q2NL68 480 aa19.35■□□□□ 0.69
RPA3-201ENST00000223129 PNPLA7Q6ZV29 1317 aa19.35■□□□□ 0.69
RPA3-201ENST00000223129 CHPF2Q9P2E5 772 aa19.34■□□□□ 0.69
RPA3-201ENST00000223129 SOS1Q07889 1333 aaPredicted RBP19.34■□□□□ 0.69
RPA3-201ENST00000223129 COL23A1Q86Y22 540 aaPredicted RBP19.34■□□□□ 0.69
RPA3-201ENST00000223129 IL6STP40189 918 aaPredicted RBP19.33■□□□□ 0.68
RPA3-201ENST00000223129 EIF5P55010 431 aaKnown RBP19.33■□□□□ 0.68
RPA3-201ENST00000223129 TRAPPC3LQ5T215 181 aa19.33■□□□□ 0.68
RPA3-201ENST00000223129 ARHGEF1Q92888 912 aaKnown RBP19.33■□□□□ 0.68
RPA3-201ENST00000223129 MSH5O43196 834 aa19.32■□□□□ 0.68
RPA3-201ENST00000223129 SSFA2P28290 1259 aa19.32■□□□□ 0.68
RPA3-201ENST00000223129 CCDC30Q5VVM6 783 aa19.32■□□□□ 0.68
RPA3-201ENST00000223129 ARXQ96QS3 562 aa19.32■□□□□ 0.68
RPA3-201ENST00000223129 DDX21Q9NR30 783 aaKnown RBP eCLIP19.31■□□□□ 0.68
RPA3-201ENST00000223129 DBF4Q9UBU7 674 aaPredicted RBP19.31■□□□□ 0.68
RPA3-201ENST00000223129 ERBB4Q15303 1308 aa19.31■□□□□ 0.68
RPA3-201ENST00000223129 COL15A1P39059 1388 aa19.31■□□□□ 0.68
RPA3-201ENST00000223129 LRP10Q7Z4F1 713 aa19.3■□□□□ 0.68
RPA3-201ENST00000223129 TBC1D2BQ9UPU7 963 aa19.3■□□□□ 0.68
RPA3-201ENST00000223129 RFC4P35249 363 aa19.29■□□□□ 0.68
RPA3-201ENST00000223129 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
RPA3-201ENST00000223129 FLAD1Q8NFF5 587 aa19.29■□□□□ 0.68
RPA3-201ENST00000223129 ADRA2BP18089 450 aa19.29■□□□□ 0.68
RPA3-201ENST00000223129 PHAXQ9H814 394 aaKnown RBP19.29■□□□□ 0.68
RPA3-201ENST00000223129 SRP68Q9UHB9 627 aaKnown RBP19.29■□□□□ 0.68
RPA3-201ENST00000223129 QSER1Q2KHR3 1735 aa19.29■□□□□ 0.68
RPA3-201ENST00000223129 SLC4A2P04920 1241 aa19.28■□□□□ 0.68
RPA3-201ENST00000223129 AIMP1Q12904 312 aaKnown RBP19.28■□□□□ 0.68
RPA3-201ENST00000223129 TTLL7Q6ZT98 887 aa19.28■□□□□ 0.68
RPA3-201ENST00000223129 STK31Q9BXU1 1019 aa19.28■□□□□ 0.68
RPA3-201ENST00000223129 CHMP4AQ9BY43 222 aa19.27■□□□□ 0.68
RPA3-201ENST00000223129 C4AP0C0L4 1744 aa19.27■□□□□ 0.67
RPA3-201ENST00000223129 COPS6Q7L5N1 327 aa19.27■□□□□ 0.67
RPA3-201ENST00000223129 DZIP3Q86Y13 1208 aaKnown RBP19.27■□□□□ 0.67
RPA3-201ENST00000223129 XAGE3Q8WTP9 111 aa19.27■□□□□ 0.67
RPA3-201ENST00000223129 HYPKQ9NX55 129 aa19.27■□□□□ 0.67
RPA3-201ENST00000223129 BCL2L13Q9BXK5 485 aa19.26■□□□□ 0.67
RPA3-201ENST00000223129 A0A087WZG4 1122 aa19.25■□□□□ 0.67
RPA3-201ENST00000223129 USPL1Q5W0Q7 1092 aa19.25■□□□□ 0.67
RPA3-201ENST00000223129 G2E3Q7L622 706 aa19.25■□□□□ 0.67
RPA3-201ENST00000223129 SSH1Q8WYL5 1049 aa19.25■□□□□ 0.67
RPA3-201ENST00000223129 NARFQ9UHQ1 456 aa19.25■□□□□ 0.67
RPA3-201ENST00000223129 ZPR1O75312 459 aa19.25■□□□□ 0.67
RPA3-201ENST00000223129 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
RPA3-201ENST00000223129 USP42Q9H9J4 1324 aaKnown RBP19.24■□□□□ 0.67
RPA3-201ENST00000223129 ZBTB7AO95365 584 aa19.24■□□□□ 0.67
RPA3-201ENST00000223129 CASZ1Q86V15 1759 aa19.24■□□□□ 0.67
RPA3-201ENST00000223129 CAMTA2O94983 1202 aa19.23■□□□□ 0.67
RPA3-201ENST00000223129 MSL1Q68DK7 614 aa19.23■□□□□ 0.67
RPA3-201ENST00000223129 ZBTB3Q9H5J0 574 aa19.23■□□□□ 0.67
RPA3-201ENST00000223129 BCL2L12Q9HB09 334 aa19.23■□□□□ 0.67
RPA3-201ENST00000223129 GYS1P13807 737 aa19.22■□□□□ 0.67
RPA3-201ENST00000223129 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
RPA3-201ENST00000223129 MRPL50Q8N5N7 158 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms