RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 TEX13AQ9BXU3 409 aaPredicted RBP34.53■■■■□ 3.12
STUB1-201ENST00000219548 CRKLP46109 303 aaKnown RBP34.52■■■■□ 3.12
STUB1-201ENST00000219548 DUSP27Q5VZP5 1158 aa34.52■■■■□ 3.12
STUB1-201ENST00000219548 STARD3NLO95772 234 aa34.51■■■■□ 3.11
STUB1-201ENST00000219548 EXOSC9Q06265 439 aaKnown RBP34.51■■■■□ 3.11
STUB1-201ENST00000219548 TSPYL6Q8N831 410 aa34.51■■■■□ 3.11
STUB1-201ENST00000219548 AKT1S1Q96B36 256 aa34.51■■■■□ 3.11
STUB1-201ENST00000219548 CNTNAP4Q9C0A0 1308 aa34.5■■■■□ 3.11
STUB1-201ENST00000219548 AK7Q96M32 723 aa34.5■■■■□ 3.11
STUB1-201ENST00000219548 STK32BQ9NY57 414 aa34.49■■■■□ 3.11
STUB1-201ENST00000219548 NBPF14Q5TI25 921 aa34.48■■■■□ 3.11
STUB1-201ENST00000219548 INTS5Q6P9B9 1019 aaKnown RBP34.48■■■■□ 3.11
STUB1-201ENST00000219548 CCDC87Q9NVE4 849 aa34.48■■■■□ 3.11
STUB1-201ENST00000219548 EIF2S2P20042 333 aaKnown RBP34.47■■■■□ 3.11
STUB1-201ENST00000219548 SLC15A2Q16348 729 aa34.47■■■■□ 3.11
STUB1-201ENST00000219548 TRMT2AQ8IZ69 625 aaKnown RBP34.47■■■■□ 3.11
STUB1-201ENST00000219548 GNPATO15228 680 aa34.46■■■■□ 3.11
STUB1-201ENST00000219548 A1BGP04217 495 aa34.46■■■■□ 3.11
STUB1-201ENST00000219548 NECTIN2Q92692 538 aa34.46■■■■□ 3.11
STUB1-201ENST00000219548 ZBTB1Q9Y2K1 713 aa34.46■■■■□ 3.11
STUB1-201ENST00000219548 QSER1Q2KHR3 1735 aa34.46■■■■□ 3.11
STUB1-201ENST00000219548 HMGB2P26583 209 aaKnown RBP34.46■■■■□ 3.11
STUB1-201ENST00000219548 PIP4K2AP48426 406 aaPredicted RBP34.46■■■■□ 3.11
STUB1-201ENST00000219548 RC3H1Q5TC82 1133 aaKnown RBP34.46■■■■□ 3.11
STUB1-201ENST00000219548 SMIM5Q71RC9 77 aa34.46■■■■□ 3.11
STUB1-201ENST00000219548 AMIGO3Q86WK7 504 aa34.46■■■■□ 3.11
STUB1-201ENST00000219548 HOXB7P09629 217 aa34.44■■■■□ 3.1
STUB1-201ENST00000219548 TWISTNBQ3B726 338 aaPredicted RBP34.44■■■■□ 3.1
STUB1-201ENST00000219548 TFCP2L1Q9NZI6 479 aa34.44■■■■□ 3.1
STUB1-201ENST00000219548 CANXP27824 592 aaKnown RBP34.43■■■■□ 3.1
STUB1-201ENST00000219548 HDGFL1Q5TGJ6 251 aa34.42■■■■□ 3.1
STUB1-201ENST00000219548 PHF14O94880 888 aa34.4■■■■□ 3.1
STUB1-201ENST00000219548 R3HDM1Q15032 1099 aaKnown RBP34.4■■■■□ 3.1
STUB1-201ENST00000219548 C4AP0C0L4 1744 aa34.4■■■■□ 3.1
STUB1-201ENST00000219548 NBPF26B4DH59 902 aa34.39■■■■□ 3.1
STUB1-201ENST00000219548 NBPF10Q6P3W6 841 aaKnown RBP34.39■■■■□ 3.1
STUB1-201ENST00000219548 NBPF15Q8N660 670 aa34.39■■■■□ 3.1
STUB1-201ENST00000219548 RPS6KA4O75676 772 aa34.39■■■■□ 3.1
STUB1-201ENST00000219548 RTCBQ9Y3I0 505 aaKnown RBP34.39■■■■□ 3.1
STUB1-201ENST00000219548 SOS1Q07889 1333 aaPredicted RBP34.38■■■■□ 3.09
STUB1-201ENST00000219548 PNPLA7Q6ZV29 1317 aa34.38■■■■□ 3.09
STUB1-201ENST00000219548 PSDA5PKW4 1024 aaPredicted RBP34.38■■■■□ 3.09
STUB1-201ENST00000219548 VAMP4O75379 141 aa34.37■■■■□ 3.09
STUB1-201ENST00000219548 ZNF330Q9Y3S2 320 aaPredicted RBP34.37■■■■□ 3.09
STUB1-201ENST00000219548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.36■■■■□ 3.09
STUB1-201ENST00000219548 ANXA1P04083 346 aa34.35■■■■□ 3.09
STUB1-201ENST00000219548 CHPF2Q9P2E5 772 aa34.35■■■■□ 3.09
STUB1-201ENST00000219548 MYL6BP14649 208 aa34.34■■■■□ 3.09
STUB1-201ENST00000219548 SSFA2P28290 1259 aa34.34■■■■□ 3.09
STUB1-201ENST00000219548 PROSER3Q2NL68 480 aa34.34■■■■□ 3.09
STUB1-201ENST00000219548 COL15A1P39059 1388 aa34.34■■■■□ 3.09
STUB1-201ENST00000219548 ERBB4Q15303 1308 aa34.34■■■■□ 3.09
STUB1-201ENST00000219548 TCERG1O14776 1098 aaKnown RBP34.33■■■■□ 3.09
STUB1-201ENST00000219548 IL6STP40189 918 aaPredicted RBP34.33■■■■□ 3.09
STUB1-201ENST00000219548 PDIA6Q15084 440 aa34.33■■■■□ 3.09
STUB1-201ENST00000219548 EIF5P55010 431 aaKnown RBP34.33■■■■□ 3.09
STUB1-201ENST00000219548 PDGFDQ9GZP0 370 aaPredicted RBP34.33■■■■□ 3.09
STUB1-201ENST00000219548 CASZ1Q86V15 1759 aa34.32■■■■□ 3.09
STUB1-201ENST00000219548 CACNA1FO60840 1977 aa34.32■■■■□ 3.08
STUB1-201ENST00000219548 COL23A1Q86Y22 540 aaPredicted RBP34.32■■■■□ 3.08
STUB1-201ENST00000219548 CCDC30Q5VVM6 783 aa34.31■■■■□ 3.08
STUB1-201ENST00000219548 TRAPPC3LQ5T215 181 aa34.3■■■■□ 3.08
STUB1-201ENST00000219548 ARHGEF1Q92888 912 aaKnown RBP34.3■■■■□ 3.08
STUB1-201ENST00000219548 MSH5O43196 834 aa34.29■■■■□ 3.08
STUB1-201ENST00000219548 DDX21Q9NR30 783 aaKnown RBP eCLIP34.29■■■■□ 3.08
STUB1-201ENST00000219548 DBF4Q9UBU7 674 aaPredicted RBP34.29■■■■□ 3.08
STUB1-201ENST00000219548 ADRA2BP18089 450 aa34.27■■■■□ 3.08
STUB1-201ENST00000219548 LRP10Q7Z4F1 713 aa34.27■■■■□ 3.08
STUB1-201ENST00000219548 FLAD1Q8NFF5 587 aa34.27■■■■□ 3.08
STUB1-201ENST00000219548 NPM2Q86SE8 214 aaKnown RBP34.26■■■■□ 3.07
STUB1-201ENST00000219548 ARXQ96QS3 562 aa34.26■■■■□ 3.07
STUB1-201ENST00000219548 CHMP4AQ9BY43 222 aa34.26■■■■□ 3.07
STUB1-201ENST00000219548 RFC4P35249 363 aa34.25■■■■□ 3.07
STUB1-201ENST00000219548 STK31Q9BXU1 1019 aa34.25■■■■□ 3.07
STUB1-201ENST00000219548 TBC1D2BQ9UPU7 963 aa34.25■■■■□ 3.07
STUB1-201ENST00000219548 BCORQ6W2J9 1755 aa34.24■■■■□ 3.07
STUB1-201ENST00000219548 SCN7AQ01118 1682 aa34.24■■■■□ 3.07
STUB1-201ENST00000219548 SRP68Q9UHB9 627 aaKnown RBP34.23■■■■□ 3.07
STUB1-201ENST00000219548 A0A087WZG4 1122 aa34.21■■■■□ 3.07
STUB1-201ENST00000219548 CT47B1P0C2W7 299 aaPredicted RBP34.21■■■■□ 3.07
STUB1-201ENST00000219548 TTLL7Q6ZT98 887 aa34.21■■■■□ 3.07
STUB1-201ENST00000219548 DZIP3Q86Y13 1208 aaKnown RBP34.21■■■■□ 3.07
STUB1-201ENST00000219548 HYPKQ9NX55 129 aa34.21■■■■□ 3.07
STUB1-201ENST00000219548 SLC4A2P04920 1241 aa34.2■■■■□ 3.07
STUB1-201ENST00000219548 AIMP1Q12904 312 aaKnown RBP34.2■■■■□ 3.07
STUB1-201ENST00000219548 XAGE3Q8WTP9 111 aa34.2■■■■□ 3.07
STUB1-201ENST00000219548 PHAXQ9H814 394 aaKnown RBP34.2■■■■□ 3.07
STUB1-201ENST00000219548 USP42Q9H9J4 1324 aaKnown RBP34.2■■■■□ 3.07
STUB1-201ENST00000219548 COPS6Q7L5N1 327 aa34.19■■■■□ 3.06
STUB1-201ENST00000219548 NARFQ9UHQ1 456 aa34.19■■■■□ 3.06
STUB1-201ENST00000219548 USPL1Q5W0Q7 1092 aa34.18■■■■□ 3.06
STUB1-201ENST00000219548 SSH1Q8WYL5 1049 aa34.18■■■■□ 3.06
STUB1-201ENST00000219548 BCL2L13Q9BXK5 485 aa34.18■■■■□ 3.06
STUB1-201ENST00000219548 NUP98P52948 1817 aa34.17■■■■□ 3.06
STUB1-201ENST00000219548 ZPR1O75312 459 aa34.17■■■■□ 3.06
STUB1-201ENST00000219548 G2E3Q7L622 706 aa34.17■■■■□ 3.06
STUB1-201ENST00000219548 ZNF428Q96B54 188 aa34.16■■■■□ 3.06
STUB1-201ENST00000219548 CAMTA2O94983 1202 aa34.15■■■■□ 3.06
STUB1-201ENST00000219548 KIF6Q6ZMV9 814 aa34.15■■■■□ 3.06
STUB1-201ENST00000219548 ZBTB7AO95365 584 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms