RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 ATP8B2P98198 1209 aa10.37□□□□□ -0.75
CSNK2A1-201ENST00000217244 MROH2AA6NES4 1674 aa10.37□□□□□ -0.75
CSNK2A1-201ENST00000217244 DDX46Q7L014 1031 aaKnown RBP10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 DRC7Q8IY82 874 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 NPHP3Q7Z494 1330 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 NEXMIFQ5QGS0 1516 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 RIMBP3CA6NJZ7 1639 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 RIMBP3BA6NNM3 1639 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 RIMBP3Q9UFD9 1639 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 A1BGP04217 495 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 NUCB2P80303 420 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 KIF6Q6ZMV9 814 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 USP16Q9Y5T5 823 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 CAMSAP1Q5T5Y3 1602 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 CCDC57Q2TAC2 916 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 RAB11FIP4Q86YS3 637 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 DDX11Q96FC9 970 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 NLRP1Q9C000 1473 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 USP44Q9H0E7 712 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
CSNK2A1-201ENST00000217244 FAM135BQ49AJ0 1406 aa10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 HSP90AB3PQ58FF7 597 aa10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 LMBR1LQ6UX01 489 aa10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 EDC3Q96F86 508 aaKnown RBP10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 LRRC2Q9BYS8 371 aa10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 GRM8O00222 908 aa10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 MSNP26038 577 aaKnown RBP10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 EIF4A1P60842 406 aaKnown RBP10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 ZCRB1Q8TBF4 217 aaKnown RBP10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 ABCC4O15439 1325 aa10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 ZNF853P0CG23 659 aa10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 ZNF790Q6PG37 636 aa10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 BICC1Q9H694 974 aaKnown RBP10.35□□□□□ -0.75
CSNK2A1-201ENST00000217244 SNRPA1P09661 255 aaKnown RBP10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 KSR2Q6VAB6 950 aa10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 PIK3C2BO00750 1634 aa10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 GLRX3O76003 335 aaKnown RBP10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 RRP12Q5JTH9 1297 aaKnown RBP10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 RNF20Q5VTR2 975 aa10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 TBC1D2BQ9UPU7 963 aa10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 ADGRB1O14514 1584 aa10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 CD2BP2O95400 341 aaKnown RBP10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 MEX3CQ5U5Q3 659 aaKnown RBP10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 ERC1Q8IUD2 1116 aa10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 NECAB1Q8N987 351 aa10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 CEP126Q9P2H0 1117 aa10.34□□□□□ -0.75
CSNK2A1-201ENST00000217244 CPS1P31327 1500 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 TMEM94Q12767 1356 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 GOLIM4O00461 696 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 SIRT1Q96EB6 747 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 ECHDC1Q9NTX5 307 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 BTG4Q9NY30 223 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 LMTK2Q8IWU2 1503 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 ARHGEF40Q8TER5 1519 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 ATP7BP35670 1465 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 IDH1O75874 414 aaKnown RBP10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 SF3A1Q15459 793 aaKnown RBP10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 RBM27Q9P2N5 1060 aaKnown RBP10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 IQSEC3Q9UPP2 1182 aaPredicted RBP10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 CYP46A1Q9Y6A2 500 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 RTL1A6NKG5 1358 aa10.33□□□□□ -0.76
CSNK2A1-201ENST00000217244 MROH1Q8NDA8 1641 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 ATP2B1P20020 1258 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 HAND2P61296 217 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 TTC39AQ5SRH9 613 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 UNC5CLQ8IV45 518 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 BICD2Q8TD16 824 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 ZNF594Q96JF6 807 aaPredicted RBP10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 PANK2Q9BZ23 570 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 HELBQ8NG08 1087 aaPredicted RBP10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 ESYT1Q9BSJ8 1104 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 PDRG1Q9NUG6 133 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 AATKQ6ZMQ8 1374 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 CPLX1O14810 134 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 RAB11FIP3O75154 756 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 TIMM10P62072 90 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 GUCY1B3Q02153 619 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 IQGAP1P46940 1657 aa10.32□□□□□ -0.76
CSNK2A1-201ENST00000217244 ARHGEF25Q86VW2 580 aa10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 SUCLG2Q96I99 432 aa10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 SOS1Q07889 1333 aaPredicted RBP10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 METTL24Q5JXM2 366 aa10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 BLOC1S2Q6QNY1 142 aa10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 TMX3Q96JJ7 454 aa10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 LRRC7Q96NW7 1537 aa10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 HTATSF1O43719 755 aaKnown RBP10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 GIGYF1O75420 1035 aaPredicted RBP10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 LINS1Q8NG48 757 aa10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 FAM89AQ96GI7 184 aa10.31□□□□□ -0.76
CSNK2A1-201ENST00000217244 NFXL1Q6ZNB6 911 aa10.3□□□□□ -0.76
CSNK2A1-201ENST00000217244 SYAP1Q96A49 352 aaPredicted RBP10.3□□□□□ -0.76
CSNK2A1-201ENST00000217244 EXOC5O00471 708 aa10.3□□□□□ -0.76
CSNK2A1-201ENST00000217244 SKOR2Q2VWA4 1001 aaPredicted RBP10.3□□□□□ -0.76
CSNK2A1-201ENST00000217244 USP26Q9BXU7 913 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms