RNA–Protein interactions for RNA: ENST00000216416.8

CNIH1-201, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNIH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-201ENST00000216416 MARCH10Q8NA82 808 aaPredicted RBP8.25□□□□□ -1.09
CNIH1-201ENST00000216416 TBC1D2BQ9UPU7 963 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 NCOA3Q9Y6Q9 1424 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 CERKQ8TCT0 537 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 BACH2Q9BYV9 841 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.25□□□□□ -1.09
CNIH1-201ENST00000216416 CPDO75976 1380 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 CEP85Q6P2H3 762 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 CCDC24Q8N4L8 307 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 DNAAF4Q8WXU2 420 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 C9orf78Q9NZ63 289 aaPredicted RBP8.25□□□□□ -1.09
CNIH1-201ENST00000216416 KIF1AQ12756 1690 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 C8orf34Q49A92 452 aa8.25□□□□□ -1.09
CNIH1-201ENST00000216416 DBF4Q9UBU7 674 aaPredicted RBP8.25□□□□□ -1.09
CNIH1-201ENST00000216416 NCBP3Q53F19 620 aaKnown RBP8.24□□□□□ -1.09
CNIH1-201ENST00000216416 SPRYD3Q8NCJ5 442 aa8.24□□□□□ -1.09
CNIH1-201ENST00000216416 CHMP3Q9Y3E7 222 aa8.24□□□□□ -1.09
CNIH1-201ENST00000216416 PHRF1Q9P1Y6 1649 aaKnown RBP8.24□□□□□ -1.09
CNIH1-201ENST00000216416 INTS3Q68E01 1043 aaKnown RBP8.24□□□□□ -1.09
CNIH1-201ENST00000216416 SRCIN1Q9C0H9 1055 aa8.24□□□□□ -1.09
CNIH1-201ENST00000216416 COL18A1P39060 1754 aa8.24□□□□□ -1.09
CNIH1-201ENST00000216416 PCNTO95613 3336 aa8.24□□□□□ -1.09
CNIH1-201ENST00000216416 FMNL2Q96PY5 1086 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 USP21Q9UK80 565 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 ADCY9O60503 1353 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 PCDH11XQ9BZA7 1347 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 PCDH11YQ9BZA8 1340 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 SRGAP3O43295 1099 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 IGKV5-2P06315 115 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 UBTFL1P0CB47 393 aaPredicted RBP8.23□□□□□ -1.09
CNIH1-201ENST00000216416 EPHA10Q5JZY3 1008 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 UBE3BQ7Z3V4 1068 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 PPP1R42Q7Z4L9 355 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 ARHGAP45Q92619 1136 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 ATG3Q9NT62 314 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 SNRPA1P09661 255 aaKnown RBP8.23□□□□□ -1.09
CNIH1-201ENST00000216416 MFAP1P55081 439 aaKnown RBP8.23□□□□□ -1.09
CNIH1-201ENST00000216416 NUTM1Q86Y26 1132 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 MS4A1P11836 297 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 CHD1LQ86WJ1 897 aa8.23□□□□□ -1.09
CNIH1-201ENST00000216416 SURF6O75683 361 aaKnown RBP8.22□□□□□ -1.09
CNIH1-201ENST00000216416 BEND3Q5T5X7 828 aa8.22□□□□□ -1.09
CNIH1-201ENST00000216416 ANKRD13DQ6ZTN6 518 aa8.22□□□□□ -1.09
CNIH1-201ENST00000216416 ZBTB1Q9Y2K1 713 aa8.22□□□□□ -1.09
CNIH1-201ENST00000216416 DDX21Q9NR30 783 aaKnown RBP eCLIP8.22□□□□□ -1.09
CNIH1-201ENST00000216416 DTNBO60941 627 aa8.21□□□□□ -1.09
CNIH1-201ENST00000216416 GNAI2P04899 355 aa8.21□□□□□ -1.09
CNIH1-201ENST00000216416 SMC5Q8IY18 1101 aa8.21□□□□□ -1.09
CNIH1-201ENST00000216416 PTPRCP08575 1304 aa8.21□□□□□ -1.09
CNIH1-201ENST00000216416 HLFQ16534 295 aa8.21□□□□□ -1.1
CNIH1-201ENST00000216416 OVOS2A0A0G2JMS6 1433 aa8.21□□□□□ -1.1
CNIH1-201ENST00000216416 FAM89AQ96GI7 184 aa8.21□□□□□ -1.1
CNIH1-201ENST00000216416 SUCLG2Q96I99 432 aa8.21□□□□□ -1.1
CNIH1-201ENST00000216416 SPATA31A1Q5TZJ5 1347 aa8.21□□□□□ -1.1
CNIH1-201ENST00000216416 BICDL1Q6ZP65 573 aa8.21□□□□□ -1.1
CNIH1-201ENST00000216416 ANKRD44Q8N8A2 993 aa8.21□□□□□ -1.1
CNIH1-201ENST00000216416 KAZALD1Q96I82 304 aa8.21□□□□□ -1.1
CNIH1-201ENST00000216416 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
CNIH1-201ENST00000216416 KSR2Q6VAB6 950 aa8.2□□□□□ -1.1
CNIH1-201ENST00000216416 SOS1Q07889 1333 aaPredicted RBP8.2□□□□□ -1.1
CNIH1-201ENST00000216416 A0A087WZG4 1122 aa8.2□□□□□ -1.1
CNIH1-201ENST00000216416 OS9Q13438 667 aaPredicted RBP8.2□□□□□ -1.1
CNIH1-201ENST00000216416 ZNF594Q96JF6 807 aaPredicted RBP8.2□□□□□ -1.1
CNIH1-201ENST00000216416 BICC1Q9H694 974 aaKnown RBP8.2□□□□□ -1.1
CNIH1-201ENST00000216416 CCT4P50991 539 aaKnown RBP8.2□□□□□ -1.1
CNIH1-201ENST00000216416 HDAC1Q13547 482 aaPredicted RBP8.2□□□□□ -1.1
CNIH1-201ENST00000216416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.2□□□□□ -1.1
CNIH1-201ENST00000216416 FAM208AQ9UK61 1670 aaKnown RBP8.2□□□□□ -1.1
CNIH1-201ENST00000216416 CHGBP05060 677 aa8.19□□□□□ -1.1
CNIH1-201ENST00000216416 FAM161AQ3B820 660 aa8.19□□□□□ -1.1
CNIH1-201ENST00000216416 SNAP23O00161 211 aa8.19□□□□□ -1.1
CNIH1-201ENST00000216416 NUCB1Q02818 461 aa8.19□□□□□ -1.1
CNIH1-201ENST00000216416 ATP10DQ9P241 1426 aa8.19□□□□□ -1.1
CNIH1-201ENST00000216416 ATP6V1AP38606 617 aa8.19□□□□□ -1.1
CNIH1-201ENST00000216416 AMIGO3Q86WK7 504 aa8.19□□□□□ -1.1
CNIH1-201ENST00000216416 UNC5CLQ8IV45 518 aa8.19□□□□□ -1.1
CNIH1-201ENST00000216416 ZBTB47Q9UFB7 747 aaPredicted RBP8.19□□□□□ -1.1
CNIH1-201ENST00000216416 AFF2P51816 1311 aa8.19□□□□□ -1.1
CNIH1-201ENST00000216416 HSP90AB1P08238 724 aaKnown RBP8.18□□□□□ -1.1
CNIH1-201ENST00000216416 GSPT1P15170 499 aaKnown RBP8.18□□□□□ -1.1
CNIH1-201ENST00000216416 LRP10Q7Z4F1 713 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 CCDC8Q9H0W5 538 aaPredicted RBP8.18□□□□□ -1.1
CNIH1-201ENST00000216416 ITPK1Q13572 414 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 RILPL2Q969X0 211 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 DCTPP1Q9H773 170 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 SLC51AQ86UW1 340 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 EDC3Q96F86 508 aaKnown RBP8.18□□□□□ -1.1
CNIH1-201ENST00000216416 PHLPP1O60346 1717 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 PHF14O94880 888 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 HYPKQ9NX55 129 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 HEG1Q9ULI3 1381 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 NCAPD2Q15021 1401 aa8.18□□□□□ -1.1
CNIH1-201ENST00000216416 NEURL1BA8MQ27 555 aa8.17□□□□□ -1.1
CNIH1-201ENST00000216416 GRM8O00222 908 aa8.17□□□□□ -1.1
CNIH1-201ENST00000216416 NBR1Q14596 966 aa8.17□□□□□ -1.1
CNIH1-201ENST00000216416 PLEKHM2Q8IWE5 1019 aa8.17□□□□□ -1.1
CNIH1-201ENST00000216416 VIRMAQ69YN4 1812 aaKnown RBP8.17□□□□□ -1.1
CNIH1-201ENST00000216416 ERVV-2B6SEH9 535 aa8.17□□□□□ -1.1
CNIH1-201ENST00000216416 SPATA31A5Q5VU36 1347 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms