RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 MACROD2A1Z1Q3 448 aa15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 ARHGEF11O15085 1522 aa15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 SMTNL1A8MU46 457 aa15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 FBXO31Q5XUX0 539 aaPredicted RBP15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 FSIP1Q8NA03 581 aa15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 ERLIN1O75477 346 aa15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 ECM2O94769 699 aaPredicted RBP15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 RPAP2Q8IXW5 612 aaPredicted RBP15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 NAPBQ9H115 298 aa15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 TIAM1Q13009 1591 aa15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 NKTRP30414 1462 aaKnown RBP15.86■□□□□ 0.13
TGFBR3-201ENST00000212355 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 CTNNBL1Q8WYA6 563 aaPredicted RBP15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 CTNNA3Q9UI47 895 aa15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 TOP1P11387 765 aaKnown RBP15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 ADGRF5Q8IZF2 1346 aa15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 SFPQP23246 707 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■□□□ 13.1
TGFBR3-201ENST00000212355 CCDC96Q2M329 555 aa15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 PPP4R3BQ5MIZ7 849 aa15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 EIF3JO75822 258 aaKnown RBP15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 CEBPAP49715 358 aaPredicted RBP15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 IQSEC3Q9UPP2 1182 aaPredicted RBP15.85■□□□□ 0.13
TGFBR3-201ENST00000212355 PRKCSHP14314 528 aaPredicted RBP15.84■□□□□ 0.13
TGFBR3-201ENST00000212355 TAF4BQ92750 862 aa15.84■□□□□ 0.13
TGFBR3-201ENST00000212355 FOXO3O43524 673 aa15.84■□□□□ 0.13
TGFBR3-201ENST00000212355 CNNM3Q8NE01 707 aa15.84■□□□□ 0.13
TGFBR3-201ENST00000212355 SLC12A7Q9Y666 1083 aa15.84■□□□□ 0.13
TGFBR3-201ENST00000212355 TMCO3Q6UWJ1 677 aa15.83■□□□□ 0.13
TGFBR3-201ENST00000212355 CCDC148Q8NFR7 591 aa15.83■□□□□ 0.13
TGFBR3-201ENST00000212355 ZNF213O14771 459 aa15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 BMP2KQ9NSY1 1161 aaPredicted RBP15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 IFIT3O14879 490 aaKnown RBP15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 CACNA2D4Q7Z3S7 1137 aa15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 MICU3Q86XE3 530 aa15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 CNPY2Q9Y2B0 182 aa15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 GOLGA6L10A0A0M3HER8 536 aa15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 CRACR2BQ8N4Y2 399 aaPredicted RBP15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 TRMT112Q9UI30 125 aaKnown RBP15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
TGFBR3-201ENST00000212355 GOLGA8AA7E2F4 631 aa15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 GTF2F1P35269 517 aaKnown RBP eCLIP15.82■□□□□ 0.122e-6■□□□□ 9.9
TGFBR3-201ENST00000212355 KRT32Q14532 448 aa15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 GLRX3O76003 335 aaKnown RBP15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 DZIP1Q86YF9 867 aaKnown RBP15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 V9GYY5 206 aaPredicted RBP15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 CHST3Q7LGC8 479 aa15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 NLRP5P59047 1200 aa15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 TDRD12Q587J7 1177 aaKnown RBP15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 DYDC1Q8WWB3 177 aa15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 HFM1A2PYH4 1435 aa15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 DISP3Q9P2K9 1392 aa15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 A0A087WZG4 1122 aa15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 SSRP1Q08945 709 aaKnown RBP15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 UBE4AQ14139 1066 aa15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 CGNQ9P2M7 1197 aaKnown RBP15.82■□□□□ 0.12
TGFBR3-201ENST00000212355 RNF187Q5TA31 235 aaPredicted RBP15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 MBIPQ9NS73 344 aa15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 ZSCAN23Q3MJ62 389 aa15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 THEMISQ8N1K5 641 aaPredicted RBP15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 PSMD1Q99460 953 aa15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 SPA17Q15506 151 aa15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 HCLS1P14317 486 aaPredicted RBP15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 ZNF397Q8NF99 534 aaPredicted RBP15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 LUC7LQ9NQ29 371 aaKnown RBP15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
TGFBR3-201ENST00000212355 WDR78Q5VTH9 848 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 SERPINA10Q9UK55 444 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 ATP2C2O75185 946 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 DDX46Q7L014 1031 aaKnown RBP15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 CIZ1Q9ULV3 898 aaPredicted RBP15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 GBP2P32456 591 aaPredicted RBP15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 USP8P40818 1118 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 CRACR2AQ9BSW2 395 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 FAM107BQ9H098 131 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 ANO10Q9NW15 660 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 NEBLO76041 1014 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 PRPF4BQ13523 1007 aaKnown RBP15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 DNAAF4Q8WXU2 420 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 SCLT1Q96NL6 688 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 HECW1Q76N89 1606 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 STARD3NLO95772 234 aa15.8■□□□□ 0.12
TGFBR3-201ENST00000212355 KIF5CO60282 957 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 BAG4O95429 457 aaKnown RBP15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 IFIT5Q13325 482 aaKnown RBP15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 CHRNA2Q15822 529 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 LIMCH1Q9UPQ0 1083 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 STAC3Q96MF2 364 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 SLC26A6Q9BXS9 759 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 DRC1Q96MC2 740 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 AFMP43652 599 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 STX6O43752 255 aa15.79■□□□□ 0.12
TGFBR3-201ENST00000212355 CAVIN4Q5BKX8 364 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms