RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 C1orf167Q5SNV9 1468 aa14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 MCM10Q7L590 875 aa14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 MIS18AQ9NYP9 233 aa14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 POLR3AO14802 1390 aaPredicted RBP14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 STRCQ7RTU9 1775 aa14.48□□□□□ -0.09
TSPAN9-201ENST00000011898 LETM1O95202 739 aaPredicted RBP14.48□□□□□ -0.09
TSPAN9-201ENST00000011898 FMN2Q9NZ56 1722 aa14.48□□□□□ -0.09
TSPAN9-201ENST00000011898 TOM1O60784 492 aa14.48□□□□□ -0.09
TSPAN9-201ENST00000011898 TSPYL1Q9H0U9 437 aa14.48□□□□□ -0.09
TSPAN9-201ENST00000011898 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.48□□□□□ -0.09
TSPAN9-201ENST00000011898 SMAP1Q8IYB5 467 aaPredicted RBP14.48□□□□□ -0.09
TSPAN9-201ENST00000011898 NALCNQ8IZF0 1738 aa14.48□□□□□ -0.09
TSPAN9-201ENST00000011898 LRRC7Q96NW7 1537 aa14.48□□□□□ -0.09
TSPAN9-201ENST00000011898 HSP90B2PQ58FF3 399 aa14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 EXOC6BQ9Y2D4 811 aa14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 LEKR1Q6ZMV7 388 aa14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 TTC5Q8N0Z6 440 aa14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 CNTROBQ8N137 903 aa14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 KCNH5Q8NCM2 988 aa14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 TIGD1Q96MW7 591 aa14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 IPO4Q8TEX9 1081 aaKnown RBP14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 TSPY26PQ9H489 355 aa14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 SEC24BO95487 1268 aa14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 RDXP35241 583 aaKnown RBP14.47□□□□□ -0.09
TSPAN9-201ENST00000011898 TNNT1P13805 278 aa14.46□□□□□ -0.09
TSPAN9-201ENST00000011898 CCDC27Q2M243 656 aa14.46□□□□□ -0.09
TSPAN9-201ENST00000011898 USP32Q8NFA0 1604 aa14.46□□□□□ -0.09
TSPAN9-201ENST00000011898 HDAC1Q13547 482 aaPredicted RBP14.45□□□□□ -0.1
TSPAN9-201ENST00000011898 BMP2KLQ5H9B9 411 aa14.45□□□□□ -0.1
TSPAN9-201ENST00000011898 BICD2Q8TD16 824 aa14.45□□□□□ -0.1
TSPAN9-201ENST00000011898 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.45□□□□□ -0.1
TSPAN9-201ENST00000011898 SMARCA5O60264 1052 aaPredicted RBP14.45□□□□□ -0.1
TSPAN9-201ENST00000011898 IL1RAPL2Q9NP60 686 aa14.45□□□□□ -0.1
TSPAN9-201ENST00000011898 CD163L1Q9NR16 1453 aa14.45□□□□□ -0.1
TSPAN9-201ENST00000011898 RIC3Q7Z5B4 369 aa14.45□□□□□ -0.1
TSPAN9-201ENST00000011898 DNAJC2Q99543 621 aaKnown RBP14.45□□□□□ -0.1
TSPAN9-201ENST00000011898 TNPO1Q92973 898 aaKnown RBP14.44□□□□□ -0.1
TSPAN9-201ENST00000011898 MST1RQ04912 1400 aa14.44□□□□□ -0.1
TSPAN9-201ENST00000011898 IL16Q14005 1332 aa14.44□□□□□ -0.1
TSPAN9-201ENST00000011898 TRIM5Q9C035 493 aa14.43□□□□□ -0.1
TSPAN9-201ENST00000011898 SRCIN1Q9C0H9 1055 aa14.43□□□□□ -0.1
TSPAN9-201ENST00000011898 ZRANB1Q9UGI0 708 aa14.43□□□□□ -0.1
TSPAN9-201ENST00000011898 TBC1D9Q6ZT07 1266 aa14.43□□□□□ -0.1
TSPAN9-201ENST00000011898 GTPBP4Q9BZE4 634 aaKnown RBP14.43□□□□□ -0.1
TSPAN9-201ENST00000011898 KDM2BQ8NHM5 1336 aa14.43□□□□□ -0.1
TSPAN9-201ENST00000011898 RAPGEF4Q8WZA2 1011 aa14.43□□□□□ -0.1
TSPAN9-201ENST00000011898 AK7Q96M32 723 aa14.43□□□□□ -0.1
TSPAN9-201ENST00000011898 FAM83GA6ND36 823 aa14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 FIBPO43427 364 aa14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 TPM3P06753 285 aa14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 GTF2F1P35269 517 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■■■■■ 27
TSPAN9-201ENST00000011898 TOMM22Q9NS69 142 aa14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 UBAP1LF5GYI3 381 aa14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 F6X3S4 739 aa14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 MBIPQ9NS73 344 aa14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 KIF1AQ12756 1690 aa14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 SRGAP3O43295 1099 aa14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 MAP4K4O95819 1239 aaPredicted RBP14.42□□□□□ -0.1
TSPAN9-201ENST00000011898 BRINP3Q76B58 766 aa14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 FSD1Q9BTV5 496 aa14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 ARHGEF10O15013 1369 aa14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 SSFA2P28290 1259 aa14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 NUCB1Q02818 461 aa14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 ZNF526Q8TF50 670 aaPredicted RBP14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 CCDC94Q9BW85 323 aaPredicted RBP14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 UPF3BQ9BZI7 483 aaKnown RBP14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 NLRP2Q9NX02 1062 aa14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 TOPAZ1Q8N9V7 1692 aa14.41□□□□□ -0.1
TSPAN9-201ENST00000011898 KIF20BQ96Q89 1820 aa14.4□□□□□ -0.1
TSPAN9-201ENST00000011898 AATKQ6ZMQ8 1374 aa14.4□□□□□ -0.1
TSPAN9-201ENST00000011898 OFD1O75665 1012 aa14.4□□□□□ -0.11
TSPAN9-201ENST00000011898 CHMP4CQ96CF2 233 aa14.4□□□□□ -0.11
TSPAN9-201ENST00000011898 NEUROD6Q96NK8 337 aa14.4□□□□□ -0.11
TSPAN9-201ENST00000011898 STRN4Q9NRL3 753 aa14.4□□□□□ -0.11
TSPAN9-201ENST00000011898 SYCE3A1L190 88 aa14.39□□□□□ -0.11
TSPAN9-201ENST00000011898 GTF2A1P52655 376 aaPredicted RBP14.39□□□□□ -0.11
TSPAN9-201ENST00000011898 KIF20AO95235 890 aa14.39□□□□□ -0.11
TSPAN9-201ENST00000011898 PSMA5P28066 241 aa14.39□□□□□ -0.11
TSPAN9-201ENST00000011898 PLEKHO1Q53GL0 409 aaPredicted RBP14.39□□□□□ -0.11
TSPAN9-201ENST00000011898 TRIM34Q9BYJ4 488 aa14.39□□□□□ -0.11
TSPAN9-201ENST00000011898 POLKQ9UBT6 870 aa14.39□□□□□ -0.11
TSPAN9-201ENST00000011898 WDR33Q9C0J8 1336 aaKnown RBP14.39□□□□□ -0.11
TSPAN9-201ENST00000011898 USP31Q70CQ4 1352 aa14.38□□□□□ -0.11
TSPAN9-201ENST00000011898 MON2Q7Z3U7 1717 aa14.38□□□□□ -0.11
TSPAN9-201ENST00000011898 AKAP12Q02952 1782 aa14.38□□□□□ -0.11
TSPAN9-201ENST00000011898 GTF2E1P29083 439 aaPredicted RBP14.38□□□□□ -0.11
TSPAN9-201ENST00000011898 FBXW7Q969H0 707 aa14.38□□□□□ -0.11
TSPAN9-201ENST00000011898 SBNO1A3KN83 1393 aa14.38□□□□□ -0.11
TSPAN9-201ENST00000011898 TULP1O00294 542 aaPredicted RBP14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 CPLX1O14810 134 aa14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 FOSBP53539 338 aa14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 ARHGAP45Q92619 1136 aa14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 CCDC34Q96HJ3 373 aa14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 MX1P20591 662 aa14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 LRRFIP1Q32MZ4 808 aaKnown RBP14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 ZNF530Q6P9A1 599 aaPredicted RBP14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 CREBRFQ8IUR6 639 aa14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 DDX17Q92841 729 aaKnown RBP14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 POLR3GO15318 223 aaPredicted RBP14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 CWC27Q6UX04 472 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms