RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 COL15A1P39059 1388 aa33.04■■■□□ 2.88
TSR3-201ENST00000007390 MAPK8IP3Q9UPT6 1336 aa33.02■■■□□ 2.88
TSR3-201ENST00000007390 KCNQ3O43525 872 aa33.02■■■□□ 2.88
TSR3-201ENST00000007390 PELP1Q8IZL8 1130 aaKnown RBP33.01■■■□□ 2.87
TSR3-201ENST00000007390 ZPR1O75312 459 aa33■■■□□ 2.87
TSR3-201ENST00000007390 FKBP8Q14318 412 aa33■■■□□ 2.87
TSR3-201ENST00000007390 PRKRIP1Q9H875 184 aaPredicted RBP33■■■□□ 2.87
TSR3-201ENST00000007390 C10orf71Q711Q0 1435 aa33■■■□□ 2.87
TSR3-201ENST00000007390 DLG5Q8TDM6 1919 aa32.99■■■□□ 2.87
TSR3-201ENST00000007390 YBX3P16989 372 aaKnown RBP eCLIP32.99■■■□□ 2.87
TSR3-201ENST00000007390 NARFQ9UHQ1 456 aa32.99■■■□□ 2.87
TSR3-201ENST00000007390 PARP3Q9Y6F1 533 aa32.99■■■□□ 2.87
TSR3-201ENST00000007390 KIF13BQ9NQT8 1826 aa32.99■■■□□ 2.87
TSR3-201ENST00000007390 EIF5P55010 431 aaKnown RBP32.98■■■□□ 2.87
TSR3-201ENST00000007390 TAF7Q15545 349 aaPredicted RBP32.98■■■□□ 2.87
TSR3-201ENST00000007390 CANXP27824 592 aaKnown RBP32.97■■■□□ 2.87
TSR3-201ENST00000007390 USPL1Q5W0Q7 1092 aa32.97■■■□□ 2.87
TSR3-201ENST00000007390 GRIN3BO60391 1043 aa32.96■■■□□ 2.87
TSR3-201ENST00000007390 CHD4Q14839 1912 aa32.94■■■□□ 2.86
TSR3-201ENST00000007390 DDR1Q08345 913 aa32.94■■■□□ 2.86
TSR3-201ENST00000007390 PXDNLA1KZ92 1463 aa32.93■■■□□ 2.86
TSR3-201ENST00000007390 A0A087WZG4 1122 aa32.93■■■□□ 2.86
TSR3-201ENST00000007390 TM4SF1P30408 202 aa32.93■■■□□ 2.86
TSR3-201ENST00000007390 IL6STP40189 918 aaPredicted RBP32.93■■■□□ 2.86
TSR3-201ENST00000007390 SNRPA1P09661 255 aaKnown RBP32.92■■■□□ 2.86
TSR3-201ENST00000007390 TGFB2P61812 414 aa32.92■■■□□ 2.86
TSR3-201ENST00000007390 PNISRQ8TF01 805 aaKnown RBP32.92■■■□□ 2.86
TSR3-201ENST00000007390 KIAA1551Q9HCM1 1747 aa32.91■■■□□ 2.86
TSR3-201ENST00000007390 BCL2L12Q9HB09 334 aa32.9■■■□□ 2.86
TSR3-201ENST00000007390 POLRMTO00411 1230 aaKnown RBP32.89■■■□□ 2.86
TSR3-201ENST00000007390 A1BGP04217 495 aa32.89■■■□□ 2.86
TSR3-201ENST00000007390 USP16Q9Y5T5 823 aa32.89■■■□□ 2.86
TSR3-201ENST00000007390 WDR43Q15061 677 aaKnown RBP eCLIP32.88■■■□□ 2.85
TSR3-201ENST00000007390 THUMPD2Q9BTF0 503 aaKnown RBP32.87■■■□□ 2.85
TSR3-201ENST00000007390 MIS18AQ9NYP9 233 aa32.87■■■□□ 2.85
TSR3-201ENST00000007390 KDM3BQ7LBC6 1761 aa32.87■■■□□ 2.85
TSR3-201ENST00000007390 PRAMEF22A3QJZ6 481 aa32.86■■■□□ 2.85
TSR3-201ENST00000007390 NFIXQ14938 502 aa32.86■■■□□ 2.85
TSR3-201ENST00000007390 SCN7AQ01118 1682 aa32.85■■■□□ 2.85
TSR3-201ENST00000007390 TMPOP42166 694 aaKnown RBP32.85■■■□□ 2.85
TSR3-201ENST00000007390 RIPK4P57078 832 aa32.85■■■□□ 2.85
TSR3-201ENST00000007390 LMOD3Q0VAK6 560 aa32.83■■■□□ 2.85
TSR3-201ENST00000007390 ZNF330Q9Y3S2 320 aaPredicted RBP32.83■■■□□ 2.85
TSR3-201ENST00000007390 A0A0G2JLW4 131 aa32.82■■■□□ 2.84
TSR3-201ENST00000007390 NPM2Q86SE8 214 aaKnown RBP32.82■■■□□ 2.84
TSR3-201ENST00000007390 RUNDC1Q96C34 613 aa32.82■■■□□ 2.84
TSR3-201ENST00000007390 ADAMTS8Q9UP79 889 aa32.82■■■□□ 2.84
TSR3-201ENST00000007390 CCDC146Q8IYE0 955 aa32.81■■■□□ 2.84
TSR3-201ENST00000007390 NRXN2Q9P2S2 1712 aa32.81■■■□□ 2.84
TSR3-201ENST00000007390 TBC1D2BQ9UPU7 963 aa32.81■■■□□ 2.84
TSR3-201ENST00000007390 N4BP2Q86UW6 1770 aaPredicted RBP32.81■■■□□ 2.84
TSR3-201ENST00000007390 ZNF316A6NFI3 1004 aaPredicted RBP32.8■■■□□ 2.84
TSR3-201ENST00000007390 DPEP1P16444 411 aa32.8■■■□□ 2.84
TSR3-201ENST00000007390 EIF4A1P60842 406 aaKnown RBP32.8■■■□□ 2.84
TSR3-201ENST00000007390 WWC3Q9ULE0 1092 aa32.8■■■□□ 2.84
TSR3-201ENST00000007390 LAMB4A4D0S4 1761 aa32.79■■■□□ 2.84
TSR3-201ENST00000007390 GIGYF1O75420 1035 aaPredicted RBP32.78■■■□□ 2.84
TSR3-201ENST00000007390 CAMTA2O94983 1202 aa32.78■■■□□ 2.84
TSR3-201ENST00000007390 ZNF784Q8NCA9 323 aaPredicted RBP32.78■■■□□ 2.84
TSR3-201ENST00000007390 SERPINB2P05120 415 aa32.77■■■□□ 2.84
TSR3-201ENST00000007390 DZIP3Q86Y13 1208 aaKnown RBP32.77■■■□□ 2.84
TSR3-201ENST00000007390 BABAM1Q9NWV8 329 aa32.77■■■□□ 2.84
TSR3-201ENST00000007390 NBPF26B4DH59 902 aa32.76■■■□□ 2.83
TSR3-201ENST00000007390 KCNA3P22001 575 aa32.76■■■□□ 2.83
TSR3-201ENST00000007390 PIP4K2AP48426 406 aaPredicted RBP32.76■■■□□ 2.83
TSR3-201ENST00000007390 NBPF10Q6P3W6 841 aaKnown RBP32.76■■■□□ 2.83
TSR3-201ENST00000007390 NBPF15Q8N660 670 aa32.76■■■□□ 2.83
TSR3-201ENST00000007390 AFDNP55196 1824 aaKnown RBP32.76■■■□□ 2.83
TSR3-201ENST00000007390 TBC1D9BQ66K14 1250 aa32.75■■■□□ 2.83
TSR3-201ENST00000007390 RRP7AQ9Y3A4 280 aaKnown RBP32.75■■■□□ 2.83
TSR3-201ENST00000007390 BRCA1P38398 1863 aaKnown RBP32.75■■■□□ 2.83
TSR3-201ENST00000007390 BCORQ6W2J9 1755 aa32.75■■■□□ 2.83
TSR3-201ENST00000007390 TSPYL4Q9UJ04 414 aa32.74■■■□□ 2.83
TSR3-201ENST00000007390 CARMIL3Q8ND23 1372 aa32.72■■■□□ 2.83
TSR3-201ENST00000007390 RGL2O15211 777 aa32.72■■■□□ 2.83
TSR3-201ENST00000007390 BICDL1Q6ZP65 573 aa32.72■■■□□ 2.83
TSR3-201ENST00000007390 BCS1LQ9Y276 419 aa32.72■■■□□ 2.83
TSR3-201ENST00000007390 PIM2Q9P1W9 311 aa32.71■■■□□ 2.83
TSR3-201ENST00000007390 TRIM35Q9UPQ4 493 aa32.71■■■□□ 2.83
TSR3-201ENST00000007390 NEUROD2Q15784 382 aa32.7■■■□□ 2.83
TSR3-201ENST00000007390 CLEC4GQ6UXB4 293 aa32.7■■■□□ 2.83
TSR3-201ENST00000007390 CHRNA5P30532 468 aa32.68■■■□□ 2.82
TSR3-201ENST00000007390 SETDB2Q96T68 719 aa32.67■■■□□ 2.82
TSR3-201ENST00000007390 ZNF652Q9Y2D9 606 aa32.67■■■□□ 2.82
TSR3-201ENST00000007390 DALRD3Q5D0E6 543 aaKnown RBP32.65■■■□□ 2.82
TSR3-201ENST00000007390 ERBB4Q15303 1308 aa32.65■■■□□ 2.82
TSR3-201ENST00000007390 ADCY9O60503 1353 aa32.64■■■□□ 2.82
TSR3-201ENST00000007390 ARFGEF1Q9Y6D6 1849 aa32.64■■■□□ 2.82
TSR3-201ENST00000007390 CHL1O00533 1208 aa32.63■■■□□ 2.81
TSR3-201ENST00000007390 PRR5LQ6MZQ0 368 aa32.63■■■□□ 2.81
TSR3-201ENST00000007390 DLEC1Q9Y238 1755 aa32.61■■■□□ 2.81
TSR3-201ENST00000007390 BRIP1Q9BX63 1249 aa32.61■■■□□ 2.81
TSR3-201ENST00000007390 CNBD1Q8NA66 436 aa32.6■■■□□ 2.81
TSR3-201ENST00000007390 PDZRN3Q9UPQ7 1066 aa32.6■■■□□ 2.81
TSR3-201ENST00000007390 CCDC184Q52MB2 194 aa32.59■■■□□ 2.81
TSR3-201ENST00000007390 H0YIN7 160 aa32.58■■■□□ 2.81
TSR3-201ENST00000007390 APAF1O14727 1248 aa32.58■■■□□ 2.81
TSR3-201ENST00000007390 ARHGAP27Q6ZUM4 889 aa32.58■■■□□ 2.81
TSR3-201ENST00000007390 C2CD5Q86YS7 1000 aa32.58■■■□□ 2.81
TSR3-201ENST00000007390 ANKRD31Q8N7Z5 1873 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms