RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Zfyve9A2A8R0 1397 aa10.89□□□□□ -0.67
Trim40-203ENSMUST00000172711 Mtcl1Q3UHU5 1945 aa10.89□□□□□ -0.67
Trim40-203ENSMUST00000172711 Zfp646Q6NV66 1788 aa10.89□□□□□ -0.67
Trim40-203ENSMUST00000172711 Lmnb1P14733 588 aaKnown RBP10.89□□□□□ -0.67
Trim40-203ENSMUST00000172711 Strn4P58404 760 aa10.89□□□□□ -0.67
Trim40-203ENSMUST00000172711 Pde3aQ9Z0X4 1141 aa10.89□□□□□ -0.67
Trim40-203ENSMUST00000172711 Ubn2Q80WC1 1314 aa10.89□□□□□ -0.67
Trim40-203ENSMUST00000172711 Ddx60E9PZQ1 1711 aa10.88□□□□□ -0.67
Trim40-203ENSMUST00000172711 Gjd4Q8BSD4 364 aa10.88□□□□□ -0.67
Trim40-203ENSMUST00000172711 DiexfQ8BTT6 772 aaKnown RBP10.88□□□□□ -0.67
Trim40-203ENSMUST00000172711 Podxl2Q8CAE9 603 aa10.88□□□□□ -0.67
Trim40-203ENSMUST00000172711 Upf1Q9EPU0 1124 aaKnown RBP10.88□□□□□ -0.67
Trim40-203ENSMUST00000172711 Pik3ap1Q9EQ32 811 aa10.88□□□□□ -0.67
Trim40-203ENSMUST00000172711 Kif13bA0A286YCV9 1847 aa10.88□□□□□ -0.67
Trim40-203ENSMUST00000172711 PgfP49764 158 aa10.87□□□□□ -0.67
Trim40-203ENSMUST00000172711 Rbm26Q6NZN0 1012 aaKnown RBP10.87□□□□□ -0.67
Trim40-203ENSMUST00000172711 Tcerg1Q8CGF7 1100 aaKnown RBP10.87□□□□□ -0.67
Trim40-203ENSMUST00000172711 TmpoQ61033 693 aaKnown RBP10.86□□□□□ -0.67
Trim40-203ENSMUST00000172711 Plekhg5Q66T02 1073 aa10.86□□□□□ -0.67
Trim40-203ENSMUST00000172711 Ciapin1Q8WTY4 309 aa10.86□□□□□ -0.67
Trim40-203ENSMUST00000172711 Nsfl1cQ9CZ44 370 aaKnown RBP10.86□□□□□ -0.67
Trim40-203ENSMUST00000172711 Adcy9P51830 1353 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 XpcP51612 930 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 Wdhd1P59328 1117 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 Pde4dQ01063 747 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 SobpQ0P5V2 864 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 Stxbp5lQ5DQR4 1185 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 Znf428Q8C1M2 176 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 Tango6Q8C3S2 1079 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 Nip7Q9CXK8 180 aaKnown RBP10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 Cabp2Q9JLK4 216 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 Usp34Q6ZQ93 3582 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 Myo5bP21271 1818 aa10.85□□□□□ -0.67
Trim40-203ENSMUST00000172711 ClspnQ80YR7 1315 aa10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 WasP70315 520 aa10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 Klhdc4Q921I2 584 aa10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 Lama4P97927 1816 aa10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 MetP16056 1379 aa10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 Setdb1O88974 1307 aa10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 Mex3cQ05A36 652 aaKnown RBP10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 Spire2Q8K1S6 718 aa10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 Stk31Q99MW1 1018 aa10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 Zbtb22Q9Z0G7 638 aa10.84□□□□□ -0.67
Trim40-203ENSMUST00000172711 Col5a2Q3U962 1497 aa10.83□□□□□ -0.68
Trim40-203ENSMUST00000172711 CfhP06909 1234 aa10.83□□□□□ -0.68
Trim40-203ENSMUST00000172711 Gja3Q64448 417 aa10.83□□□□□ -0.68
Trim40-203ENSMUST00000172711 Cd248Q91V98 765 aa10.83□□□□□ -0.68
Trim40-203ENSMUST00000172711 Dpf1Q9QX66 387 aa10.83□□□□□ -0.68
Trim40-203ENSMUST00000172711 Prr5lA2AVJ5 370 aa10.82□□□□□ -0.68
Trim40-203ENSMUST00000172711 PrimpolQ6P1E7 537 aa10.82□□□□□ -0.68
Trim40-203ENSMUST00000172711 Tspoap1Q7TNF8 1846 aa10.82□□□□□ -0.68
Trim40-203ENSMUST00000172711 Usp19Q3UJD6 1360 aa10.81□□□□□ -0.68
Trim40-203ENSMUST00000172711 Snai1Q02085 264 aa10.81□□□□□ -0.68
Trim40-203ENSMUST00000172711 Tsen2Q6P7W5 460 aa10.81□□□□□ -0.68
Trim40-203ENSMUST00000172711 Ppp2r1aQ76MZ3 589 aa10.81□□□□□ -0.68
Trim40-203ENSMUST00000172711 Irx6Q9ER75 438 aa10.81□□□□□ -0.68
Trim40-203ENSMUST00000172711 Abcc12Q80WJ6 1366 aa10.81□□□□□ -0.68
Trim40-203ENSMUST00000172711 Ambra1A2AH22 1300 aa10.8□□□□□ -0.68
Trim40-203ENSMUST00000172711 Gm12185Q5NCB2 835 aa10.8□□□□□ -0.68
Trim40-203ENSMUST00000172711 PdgfdQ925I7 370 aa10.8□□□□□ -0.68
Trim40-203ENSMUST00000172711 Pdzph1Q8BGR1 1238 aa10.79□□□□□ -0.68
Trim40-203ENSMUST00000172711 Lama2Q60675 3118 aaKnown RBP10.79□□□□□ -0.68
Trim40-203ENSMUST00000172711 Prdm11A2AGX3 565 aa10.79□□□□□ -0.68
Trim40-203ENSMUST00000172711 Zfp777B9EKF4 885 aa10.79□□□□□ -0.68
Trim40-203ENSMUST00000172711 Rbm46P86049 533 aa10.79□□□□□ -0.68
Trim40-203ENSMUST00000172711 Btbd11Q6GQW0 1109 aa10.79□□□□□ -0.68
Trim40-203ENSMUST00000172711 Unc5clQ6R653 518 aa10.79□□□□□ -0.68
Trim40-203ENSMUST00000172711 Mylk2Q8VCR8 613 aa10.79□□□□□ -0.68
Trim40-203ENSMUST00000172711 D830030K20RikE9PYQ5 218 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Gm3043K7N693 218 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Gm16440K7N6G6 218 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Gm2244L7N2A3 218 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Gm3278L7N2D2 218 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Gm8271L7N2E2 218 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Prkab2Q6PAM0 271 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 DaglaQ6WQJ1 1044 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Rab11fip3Q8CHD8 1047 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Ferd3lQ923Z4 168 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Gigyf1Q99MR1 1044 aaKnown RBP10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 U2af1Q9D883 239 aaKnown RBP10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Rapgef4Q9EQZ6 1011 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Ptf1aQ9QX98 324 aa10.78□□□□□ -0.68
Trim40-203ENSMUST00000172711 Nup188Q6ZQH8 1759 aa10.77□□□□□ -0.68
Trim40-203ENSMUST00000172711 Thsd7bQ6P4U0 1607 aa10.77□□□□□ -0.69
Trim40-203ENSMUST00000172711 Prim1P20664 417 aa10.77□□□□□ -0.69
Trim40-203ENSMUST00000172711 Q4VA45 678 aa10.77□□□□□ -0.69
Trim40-203ENSMUST00000172711 Esco1Q69Z69 843 aa10.77□□□□□ -0.69
Trim40-203ENSMUST00000172711 Slc39a6Q8C145 765 aa10.77□□□□□ -0.69
Trim40-203ENSMUST00000172711 Ppp1r3fQ9JIG4 799 aa10.77□□□□□ -0.69
Trim40-203ENSMUST00000172711 Mrc1Q61830 1456 aa10.77□□□□□ -0.69
Trim40-203ENSMUST00000172711 Sipa1l3G3X9J0 1776 aa10.76□□□□□ -0.69
Trim40-203ENSMUST00000172711 Cnnm1Q0GA42 951 aa10.76□□□□□ -0.69
Trim40-203ENSMUST00000172711 Ptcd1Q8C2E4 695 aaKnown RBP10.76□□□□□ -0.69
Trim40-203ENSMUST00000172711 Zfp831A2ADM8 1628 aa10.76□□□□□ -0.69
Trim40-203ENSMUST00000172711 Cyp2c23E9Q5K4 494 aa10.75□□□□□ -0.69
Trim40-203ENSMUST00000172711 Fhdc1Q3ULZ2 1149 aa10.75□□□□□ -0.69
Trim40-203ENSMUST00000172711 Adam1aQ60813 791 aa10.75□□□□□ -0.69
Trim40-203ENSMUST00000172711 Slf2Q6P9P0 1278 aa10.75□□□□□ -0.69
Trim40-203ENSMUST00000172711 Pdia6Q922R8 440 aaKnown RBP10.75□□□□□ -0.69
Trim40-203ENSMUST00000172711 Stk32bQ9JJX8 414 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms