RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Tpm2P58774 284 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Slc7a3P70423 618 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Nol8Q3UHX0 1147 aaKnown RBP7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Tmco5bQ80X59 307 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Dnajc5P60904 198 aa7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Ppip5k2Q6ZQB6 1129 aa7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Smarce1O54941 411 aaKnown RBP7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 EngaseQ8BX80 734 aa7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Ppp6r3Q922D4 844 aa7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Phlpp1Q8CHE4 1687 aa7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Ccdc85aQ5SP85 500 aa7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Atl2Q6PA06 583 aa7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Zkscan1Q8BGS3 561 aaKnown RBP7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 GphnQ8BUV3 769 aaKnown RBP7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Fam13bQ8K2H3 851 aa7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Amotl1Q9D4H4 968 aa7.61□□□□□ -1.19
Lig4-202ENSMUST00000170033 Topaz1E5FYH1 1653 aa7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 ImpactO55091 318 aa7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 Gnai2P08752 355 aaKnown RBP7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 Cbx1P83917 185 aaKnown RBP7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 Ccdc69Q3TCJ8 202 aa7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 Tulp1Q9Z273 543 aa7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 Dennd6aQ8BH65 605 aa7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 AnlnQ8K298 1121 aaKnown RBP7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 Pnpla7A2AJ88 1352 aa7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 FocadA2AKG8 1798 aa7.6□□□□□ -1.19
Lig4-202ENSMUST00000170033 Tnks1bp1P58871 1720 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Erc2Q6PH08 957 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Ssh1Q76I79 1042 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Sv2bQ8BG39 683 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Cyp46a1Q9WVK8 500 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Nek4Q9Z1J2 792 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Ubr2Q6WKZ8 1755 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Sipa1l2Q80TE4 1722 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Ubap1lG3UW59 384 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Atp8b2P98199 1209 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Rbm26Q6NZN0 1012 aaKnown RBP7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Nlgn1Q99K10 843 aa7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 HnrnpmQ9D0E1 729 aaKnown RBP7.59□□□□□ -1.19
Lig4-202ENSMUST00000170033 Tmem2Q5FWI3 1383 aa7.59□□□□□ -1.2
Lig4-202ENSMUST00000170033 IghaA0A0A6YXW6 389 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ccdc146E9Q9F7 977 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Pdia3P27773 505 aaKnown RBP7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Irx2P81066 474 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Gpbp1l1Q6NZP2 473 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ggt6Q6PDE7 497 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Kcnh5Q920E3 988 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Eif3aP23116 1344 aaKnown RBP7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Pnmal2G3X9N3 661 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 MafgO54790 162 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Prkar2bP31324 416 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ddit3P35639 168 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 LlphQ9D945 130 aaKnown RBP7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Atp10bB1AWN4 1474 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Zmynd15Q8C0R7 736 aa7.58□□□□□ -1.2
Lig4-202ENSMUST00000170033 Asxl2Q8BZ32 1370 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Mmp8O70138 465 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ddx19aQ61655 478 aaKnown RBP7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Nphp1Q9QY53 687 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Nrxn3Q6P9K9 1571 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Shank2Q80Z38 1476 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Mcmdc2E9Q956 681 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Hoxc9P09633 260 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 AppP12023 770 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Kcnj4P52189 445 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Cct4P80315 539 aaKnown RBP7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Mum1Q6DID5 682 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Pdcl2Q78Y63 240 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Pnma2Q8BHK0 365 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 Znf330Q922H9 316 aa7.57□□□□□ -1.2
Lig4-202ENSMUST00000170033 1700006A11RikB9EHI3 544 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Nectin2P32507 530 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Strn4P58404 760 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Eya1P97767 591 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Atp2b3Q0VF55 1220 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Atg4a-psA0A0G2JFS9 396 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Atg4aQ8C9S8 396 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Tmem119Q8R138 280 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 C1qtnf12Q8R2Z0 308 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ccdc7Q9D541 371 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ddx60E9PZQ1 1711 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Hmgb1P63158 215 aaKnown RBP7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 U2surpQ6NV83 1029 aaKnown RBP7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 FanclQ9CR14 375 aa7.56□□□□□ -1.2
Lig4-202ENSMUST00000170033 Zc3h4Q6ZPZ3 1304 aaKnown RBP7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Tns3Q5SSZ5 1440 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 MpripP97434 1024 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 CoilQ5SU73 570 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Cyp27a1Q9DBG1 533 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Simc1E9Q6E9 1354 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Bcl9lQ67FY2 1494 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ric1Q69ZJ7 1422 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Slit1Q80TR4 1531 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Gm21698A0A087WQP8 267 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ddrgk1Q80WW9 315 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Echdc1Q9D9V3 322 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 Tbc1d4Q8BYJ6 1307 aa7.55□□□□□ -1.2
Lig4-202ENSMUST00000170033 PsapQ61207 557 aaKnown RBP7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ercc6lQ8BHK9 1240 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Pwp2Q8BU03 919 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms