RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Zap70P43404 618 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 EspnlQ3UYR4 1005 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Brf1Q8CFK2 676 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Utp3Q9JI13 469 aaKnown RBP20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Stx6Q9JKK1 255 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Rad50P70388 1312 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 CemipQ8BI06 1361 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Brpf1B2RRD7 1212 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Usp48Q3V0C5 1052 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 DpydQ8CHR6 1025 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 HypkQ9CR41 129 aa20.93■□□□□ 0.94
Ckap4-202ENSMUST00000167671 NcapgE9PWG6 1004 aa20.92■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Atf5O70191 283 aa20.92■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Idi1P58044 227 aa20.92■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Ccdc173A0JLY1 547 aa20.92■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Zbtb45Q52KG4 520 aa20.91■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Mad1l1Q9WTX8 717 aaKnown RBP20.91■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Map2P20357 1828 aa20.91■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Myo5bP21271 1818 aa20.91■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Wdr93Q402B2 695 aa20.91■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Tceal9Q9DD24 104 aa20.91■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Camta1A2A891 1682 aa20.9■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Cfdp1O88271 295 aaKnown RBP20.9■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Plppr3Q7TPB0 716 aa20.9■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Pnpla7A2AJ88 1352 aa20.89■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Znf335A2A5K6 1337 aa20.89■□□□□ 0.94
Ckap4-202ENSMUST00000167671 Hoxc9P09633 260 aa20.89■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Syt1P46096 421 aa20.89■□□□□ 0.93
Ckap4-202ENSMUST00000167671 RictorQ6QI06 1708 aa20.89■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Ccdc178Q8CDV0 866 aa20.89■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Zfp51Q3U4L8 781 aa20.89■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Sirt1Q923E4 737 aa20.89■□□□□ 0.93
Ckap4-202ENSMUST00000167671 NalcnQ8BXR5 1738 aa20.88■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Bcl2l13P59017 434 aa20.88■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Zscan22Q8BGS5 496 aa20.88■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Ubr1O70481 1757 aa20.88■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Fkbp4P30416 458 aa20.88■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Ube2hP62257 183 aa20.88■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Hvcn1Q3U2S8 269 aa20.88■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Mphosph10Q810V0 681 aaKnown RBP20.88■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Top1mtQ8R4U6 593 aa20.88■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Pik3c2aQ61194 1686 aa20.87■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Slit2Q9R1B9 1521 aa20.87■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Wdr78E9PYY5 807 aa20.87■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Tti2Q8BGV4 512 aa20.87■□□□□ 0.93
Ckap4-202ENSMUST00000167671 N4bp2F8VQG7 1678 aaKnown RBP20.87■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Fam184aE9PW83 1143 aa20.87■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Cct4P80315 539 aaKnown RBP20.87■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Serpina10Q8R121 448 aa20.87■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Ythdc1E9Q5K9 736 aaKnown RBP20.86■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Pa2g4P50580 394 aaKnown RBP20.86■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Mx2Q9WVP9 655 aa20.86■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Cfap73J3QPZ5 306 aa20.86■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Cavin1O54724 392 aa20.86■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Arhgef1Q61210 920 aaKnown RBP20.86■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Cdca7lQ922M5 438 aa20.86■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Cd22P35329 862 aa20.85■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Med4Q9CQA5 270 aa20.85■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Sf3a1Q8K4Z5 791 aaKnown RBP20.85■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Ptgs1P22437 602 aa20.84■□□□□ 0.93
Ckap4-202ENSMUST00000167671 CoilQ5SU73 570 aa20.84■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Gys2Q8VCB3 704 aa20.84■□□□□ 0.93
Ckap4-202ENSMUST00000167671 CgnP59242 1191 aa20.84■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Gpatch11Q3UFS4 262 aa20.84■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Tgfb1i1Q62219 461 aa20.84■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Rps6ka5Q8C050 863 aa20.84■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Rreb1Q3UH06 1700 aaKnown RBP20.83■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Nom1Q3UFM5 854 aaKnown RBP20.83■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Snx13Q6PHS6 957 aa20.83■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Wdr24Q8CFJ9 790 aa20.83■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Amotl2Q8K371 772 aa20.83■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Tceanc2Q8R2M0 207 aa20.83■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Q9D9S1 216 aa20.83■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Mmel1Q9JLI3 765 aa20.83■□□□□ 0.93
Ckap4-202ENSMUST00000167671 Ncbp1Q3UYV9 790 aaKnown RBP20.83■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Ifit2Q64112 472 aa20.83■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Tbc1d30Q69ZT9 766 aa20.83■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Tsr2Q8C8T8 191 aa20.83■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Add2Q9QYB8 725 aa20.83■□□□□ 0.92
Ckap4-202ENSMUST00000167671 MsnP26041 577 aaKnown RBP20.82■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Ccdc66Q6NS45 935 aa20.82■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Tbc1d31Q6NXY1 996 aa20.82■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Bend3Q6PAL0 825 aa20.82■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Ppfia1B2RXQ2 1266 aa20.82■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Ahnak2E9PYB0 1738 aaKnown RBP20.82■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Gm10563F6WIE4 79 aa20.81■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Polr3gQ6NXY9 223 aa20.81■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Edc3Q8K2D3 508 aaKnown RBP20.81■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Pkp1P97350 728 aaKnown RBP20.81■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Nup88Q8CEC0 753 aaKnown RBP20.81■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Trpm3Q5F4S9 1721 aa20.8■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Fyb1O35601 819 aa20.8■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Slc35g1Q8BY79 368 aa20.8■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Col16a1Q8BLX7 1580 aa20.8■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Slit3Q9WVB4 1523 aa20.8■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Eif4a1P60843 406 aaKnown RBP20.8■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Mrpl50Q8VDT9 159 aaKnown RBP20.8■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Cnksr1A2A9K7 700 aa20.79■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Fam228bQ497Q6 232 aa20.79■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Abcc10Q8R4P9 1501 aa20.79■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms