RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Mre11Q61216 706 aa21.52■■□□□ 1.04
Sort1-203ENSMUST00000135636 Zfp444Q3TDV8 331 aaKnown RBP21.52■■□□□ 1.03
Sort1-203ENSMUST00000135636 Kif18aQ91WD7 886 aa21.51■■□□□ 1.03
Sort1-203ENSMUST00000135636 Krt85Q9Z2T6 507 aa21.51■■□□□ 1.03
Sort1-203ENSMUST00000135636 Fbf1A2A870 1173 aa21.51■■□□□ 1.03
Sort1-203ENSMUST00000135636 NrkQ9R0G8 1455 aa21.51■■□□□ 1.03
Sort1-203ENSMUST00000135636 Smarcad1Q04692 1021 aa21.51■■□□□ 1.03
Sort1-203ENSMUST00000135636 Jarid2Q62315 1234 aa21.51■■□□□ 1.03
Sort1-203ENSMUST00000135636 Ncapd3Q6ZQK0 1506 aa21.51■■□□□ 1.03
Sort1-203ENSMUST00000135636 Myl3P09542 204 aa21.51■■□□□ 1.03
Sort1-203ENSMUST00000135636 Bag4Q8CI61 457 aa21.5■■□□□ 1.03
Sort1-203ENSMUST00000135636 Sde2Q8K1J5 448 aaKnown RBP21.5■■□□□ 1.03
Sort1-203ENSMUST00000135636 Gcc1Q9D4H2 778 aa21.5■■□□□ 1.03
Sort1-203ENSMUST00000135636 Znf394Q9Z1D9 521 aa21.5■■□□□ 1.03
Sort1-203ENSMUST00000135636 Tsg101Q61187 391 aa21.5■■□□□ 1.03
Sort1-203ENSMUST00000135636 Atp2b3Q0VF55 1220 aa21.5■■□□□ 1.03
Sort1-203ENSMUST00000135636 Bag1Q60739 355 aa21.5■■□□□ 1.03
Sort1-203ENSMUST00000135636 Pip4k2aO70172 405 aa21.5■■□□□ 1.03
Sort1-203ENSMUST00000135636 Vps8Q0P5W1 1427 aa21.49■■□□□ 1.03
Sort1-203ENSMUST00000135636 Gnl2Q99LH1 728 aaKnown RBP21.49■■□□□ 1.03
Sort1-203ENSMUST00000135636 Traf3ip1Q149C2 625 aa21.49■■□□□ 1.03
Sort1-203ENSMUST00000135636 Ppip5k2Q6ZQB6 1129 aa21.49■■□□□ 1.03
Sort1-203ENSMUST00000135636 Spocd1B1ASB6 936 aa21.49■■□□□ 1.03
Sort1-203ENSMUST00000135636 Rapgef3Q8VCC8 918 aa21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Izumo3A6PWV3 263 aa21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Tfip11Q9ERA6 838 aaKnown RBP21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Speer4dL7N216 212 aa21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Calm1P0DP26 149 aaKnown RBP21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Calm2P0DP27 149 aaKnown RBP21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Calm3P0DP28 149 aaKnown RBP21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Slc12a5Q91V14 1138 aa21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Txndc16Q7TN22 820 aa21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Ercc6lQ8BHK9 1240 aa21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 ParnQ8VDG3 624 aa21.48■■□□□ 1.03
Sort1-203ENSMUST00000135636 Igf1rQ60751 1373 aa21.47■■□□□ 1.03
Sort1-203ENSMUST00000135636 Tom1l2Q5SRX1 507 aa21.47■■□□□ 1.03
Sort1-203ENSMUST00000135636 Cct4P80315 539 aaKnown RBP21.47■■□□□ 1.03
Sort1-203ENSMUST00000135636 Bcar3Q9QZK2 820 aa21.47■■□□□ 1.03
Sort1-203ENSMUST00000135636 Neurog2P70447 263 aa21.47■■□□□ 1.03
Sort1-203ENSMUST00000135636 Dact3Q0PHV7 610 aa21.47■■□□□ 1.03
Sort1-203ENSMUST00000135636 Txnrd1Q9JMH6 613 aa21.47■■□□□ 1.03
Sort1-203ENSMUST00000135636 Klhl34A2AI76 644 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Slc1a4O35874 532 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Gnat3Q3V3I2 354 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Dydc2Q9D3X8 139 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Cetn1P41209 172 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Olfml1Q8BSH2 233 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Mapkbp1Q6NS57 1503 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Tax1bp1Q3UKC1 814 aaKnown RBP21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Taf12Q8VE65 161 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Rnf34Q99KR6 376 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 ZwintQ9CQU5 252 aa21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 DroshaQ5HZJ0 1373 aaKnown RBP21.46■■□□□ 1.03
Sort1-203ENSMUST00000135636 Luc7lQ9CYI4 371 aaKnown RBP21.45■■□□□ 1.02
Sort1-203ENSMUST00000135636 PdcQ9QW08 244 aa21.45■■□□□ 1.02
Sort1-203ENSMUST00000135636 Sil1Q9EPK6 465 aa21.45■■□□□ 1.02
Sort1-203ENSMUST00000135636 Frmpd1A2AKB4 1549 aa21.45■■□□□ 1.02
Sort1-203ENSMUST00000135636 CastP51125 788 aa21.45■■□□□ 1.02
Sort1-203ENSMUST00000135636 Slc52a2Q9D8F3 450 aa21.45■■□□□ 1.02
Sort1-203ENSMUST00000135636 Magi1Q6RHR9 1471 aa21.44■■□□□ 1.02
Sort1-203ENSMUST00000135636 Mns1Q61884 491 aa21.44■■□□□ 1.02
Sort1-203ENSMUST00000135636 Ctnna2Q61301 953 aa21.44■■□□□ 1.02
Sort1-203ENSMUST00000135636 Plekho1Q9JIY0 408 aa21.44■■□□□ 1.02
Sort1-203ENSMUST00000135636 Slc4a4O88343 1079 aa21.44■■□□□ 1.02
Sort1-203ENSMUST00000135636 Atp10dQ8K2X1 1416 aa21.44■■□□□ 1.02
Sort1-203ENSMUST00000135636 Tex13c2A0A0G2JGA3 530 aa21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 TchpQ3TVW5 497 aa21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Gm156Q58A37 223 aa21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Rbm27Q5SFM8 1060 aaKnown RBP21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Tspyl2Q7TQI8 677 aa21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Arhgef5E9Q7D5 1581 aa21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Ddx10Q80Y44 875 aaKnown RBP21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Tmco3Q8BH01 678 aa21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Idi2Q8BFZ6 227 aa21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Cep57l1Q8VDS7 400 aa21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Mrpl12Q9DB15 201 aaKnown RBP21.43■■□□□ 1.02
Sort1-203ENSMUST00000135636 Dok7Q18PE0 504 aa21.42■■□□□ 1.02
Sort1-203ENSMUST00000135636 Kif3cO35066 796 aa21.42■■□□□ 1.02
Sort1-203ENSMUST00000135636 Ccdc181Q80ZU5 509 aa21.42■■□□□ 1.02
Sort1-203ENSMUST00000135636 Ufl1Q8CCJ3 793 aaKnown RBP21.42■■□□□ 1.02
Sort1-203ENSMUST00000135636 Dnajc10Q9DC23 793 aa21.42■■□□□ 1.02
Sort1-203ENSMUST00000135636 Chaf1aQ9QWF0 911 aa21.42■■□□□ 1.02
Sort1-203ENSMUST00000135636 Ttll13A4Q9F6 804 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Dctn1O08788 1281 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Lrrfip1Q3UZ39 729 aaKnown RBP21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Kif22Q3V300 660 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Mum1Q6DID5 682 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 MthfsQ9D110 203 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Def6Q8C2K1 630 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Prkar2bP31324 416 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 MycP01108 439 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Mex3cQ05A36 652 aaKnown RBP21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Pram1Q6BCL1 675 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 CpvlQ9D3S9 478 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Eid1Q9DCR4 169 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Naip1Q9QWK5 1403 aa21.41■■□□□ 1.02
Sort1-203ENSMUST00000135636 Pus7B7ZNL8 666 aaKnown RBP21.4■■□□□ 1.02
Sort1-203ENSMUST00000135636 Zap70P43404 618 aa21.4■■□□□ 1.02
Sort1-203ENSMUST00000135636 Tmem143Q8VD26 458 aa21.4■■□□□ 1.02
Sort1-203ENSMUST00000135636 Xrcc4Q924T3 326 aa21.4■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms