RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Als2Q920R0 1651 aa19.39■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Ets1P27577 440 aa19.39■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Ppp1r37Q8BKR5 712 aa19.39■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Nol8Q3UHX0 1147 aaKnown RBP19.38■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Pdcl3Q8BVF2 240 aa19.38■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Fam50bQ9WTJ8 334 aa19.38■□□□□ 0.69
Ckap4-201ENSMUST00000053871 4931400O07RikQ9D4M5 137 aa19.38■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Adcy9P51830 1353 aa19.38■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Mon2Q80TL7 1715 aa19.38■□□□□ 0.69
Ckap4-201ENSMUST00000053871 C3P01027 1663 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Kif20aP97329 887 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Gjb2Q00977 226 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Isy1Q69ZQ2 285 aaKnown RBP19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Wdr17E9Q271 1322 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Tmem2Q5FWI3 1383 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Gm45015A0A140LII9 184 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Gm18336A0A140LIU8 765 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 ImpactO55091 318 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 PsapQ61207 557 aaKnown RBP19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Scn7aB1AYL1 1681 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Ptpn23Q6PB44 1692 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Col1a2Q01149 1372 aa19.37■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Cct4P80315 539 aaKnown RBP19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Ncoa4Q5U4H9 625 aa19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Zranb3Q6NZP1 1069 aa19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 KinQ8K339 391 aa19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Kcnn1Q9EQR3 537 aa19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Myo5bP21271 1818 aa19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Arfgef2A2A5R2 1792 aa19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Atp6v1dP57746 247 aa19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 SympkQ80X82 1284 aa19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Il1rapl2Q9ERS6 686 aa19.36■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Trpm3Q5F4S9 1721 aa19.35■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Rad17Q6NXW6 688 aa19.35■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Igfbp6P47880 238 aa19.35■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Irf9Q61179 399 aa19.35■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Slc39a6Q8C145 765 aa19.35■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Lmbr1lQ9D1E5 489 aa19.35■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Zbtb3Q91X45 518 aa19.34■□□□□ 0.69
Ckap4-201ENSMUST00000053871 PtmsQ9D0J8 101 aaKnown RBP19.34■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Kdm6aO70546 1401 aa19.34■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Cnnm1Q0GA42 951 aa19.34■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Chmp7Q8R1T1 451 aa19.34■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Tceanc2Q8R2M0 207 aa19.34■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Bicc1Q99MQ1 977 aaKnown RBP19.34■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Tns3Q5SSZ5 1440 aa19.34■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Aox2Q5SGK3 1345 aa19.33■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Gm21698A0A087WQP8 267 aa19.33■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Gm21671G3UY31 267 aa19.33■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Naa30Q8CES0 364 aa19.33■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Top1mtQ8R4U6 593 aa19.33■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Smarce1O54941 411 aaKnown RBP19.33■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Anapc15P60007 132 aa19.33■□□□□ 0.69
Ckap4-201ENSMUST00000053871 EappQ5BU09 281 aa19.33■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Slain2Q8CI08 581 aa19.33■□□□□ 0.69
Ckap4-201ENSMUST00000053871 Pcmtd1P59913 357 aa19.33■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Ints3Q7TPD0 1041 aaKnown RBP19.33■□□□□ 0.68
Ckap4-201ENSMUST00000053871 4930504O13RikQ8C5Z9 145 aa19.33■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Elmsan1E9Q2I4 1089 aaKnown RBP19.32■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Utp18Q5SSI6 552 aaKnown RBP19.32■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Ttll7A4Q9F0 912 aa19.32■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Ms4a2P20490 235 aa19.32■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Dixdc1Q80Y83 711 aa19.32■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Slc26a8Q8R0C3 999 aa19.32■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Pdzd9Q9D9M4 266 aa19.32■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Rad50P70388 1312 aa19.32■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Prkab2Q6PAM0 271 aa19.31■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Gripap1Q8VD04 806 aa19.31■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Neurod6P48986 337 aa19.31■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Usp48Q3V0C5 1052 aa19.31■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Noc3lQ8VI84 807 aaKnown RBP19.31■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Atg3Q9CPX6 314 aa19.31■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Bms1Q6PGF5 1284 aaKnown RBP19.31■□□□□ 0.68
Ckap4-201ENSMUST00000053871 OptnQ8K3K8 584 aa19.3■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Grm8P47743 908 aa19.3■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Fam228bQ497Q6 232 aa19.3■□□□□ 0.68
Ckap4-201ENSMUST00000053871 PigbQ9JJQ0 542 aa19.3■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Nup153E9Q3G8 1462 aaKnown RBP19.29■□□□□ 0.68
Ckap4-201ENSMUST00000053871 MecomP14404 1042 aa19.29■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Kif4P33174 1231 aa19.29■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Farp2Q91VS8 1065 aa19.29■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Sipa1l2Q80TE4 1722 aa19.29■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Rufy3Q9D394 469 aa19.29■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Taf5lQ91WQ5 589 aa19.28■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Cdca7lQ922M5 438 aa19.28■□□□□ 0.68
Ckap4-201ENSMUST00000053871 ThemisQ8BGW0 636 aa19.28■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Smc3Q9CW03 1217 aaKnown RBP19.28■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Ppfia1B2RXQ2 1266 aa19.28■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Zbtb22Q9Z0G7 638 aa19.28■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Ifit2Q64112 472 aa19.27■□□□□ 0.68
Ckap4-201ENSMUST00000053871 TkfcQ8VC30 578 aa19.27■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Taf7Q9R1C0 341 aa19.27■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Mad1l1Q9WTX8 717 aaKnown RBP19.27■□□□□ 0.68
Ckap4-201ENSMUST00000053871 Gtf2a1Q99PM3 378 aa19.26■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Strn4P58404 760 aa19.26■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Tti2Q8BGV4 512 aa19.26■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Rnf123Q5XPI3 1314 aa19.26■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Abcc12Q80WJ6 1366 aa19.25■□□□□ 0.67
Ckap4-201ENSMUST00000053871 AppP12023 770 aa19.25■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Nfat5Q9WV30 1534 aa19.25■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms