RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Dzip1Q8BMD2 852 aa11.27□□□□□ -0.6
Usp28-201ENSMUST00000047349 Farp2Q91VS8 1065 aa11.27□□□□□ -0.6
Usp28-201ENSMUST00000047349 Thsd7aQ69ZU6 1645 aa11.27□□□□□ -0.6
Usp28-201ENSMUST00000047349 Irf9Q61179 399 aa11.27□□□□□ -0.61
Usp28-201ENSMUST00000047349 Atp10bB1AWN4 1474 aa11.27□□□□□ -0.61
Usp28-201ENSMUST00000047349 Phactr2B1AVP0 632 aa11.27□□□□□ -0.61
Usp28-201ENSMUST00000047349 Vwa3bJ9JI28 736 aa11.27□□□□□ -0.61
Usp28-201ENSMUST00000047349 Siglec1Q62230 1695 aa11.26□□□□□ -0.61
Usp28-201ENSMUST00000047349 Tpx2A2APB8 745 aaKnown RBP11.26□□□□□ -0.61
Usp28-201ENSMUST00000047349 Cyp2d11P24457 504 aa11.26□□□□□ -0.61
Usp28-201ENSMUST00000047349 Map3k2Q61083 619 aa11.26□□□□□ -0.61
Usp28-201ENSMUST00000047349 Dlg5E9Q9R9 1921 aa11.26□□□□□ -0.61
Usp28-201ENSMUST00000047349 PtmaP26350 111 aa11.26□□□□□ -0.61
Usp28-201ENSMUST00000047349 Jakmip1Q8BVL9 626 aa11.25□□□□□ -0.61
Usp28-201ENSMUST00000047349 Tmx3Q8BXZ1 456 aa11.25□□□□□ -0.61
Usp28-201ENSMUST00000047349 Cchcr1Q8K2I2 770 aa11.25□□□□□ -0.61
Usp28-201ENSMUST00000047349 TefQ9JLC6 301 aa11.25□□□□□ -0.61
Usp28-201ENSMUST00000047349 Flt4P35917 1363 aa11.25□□□□□ -0.61
Usp28-201ENSMUST00000047349 BcorQ8CGN4 1759 aa11.25□□□□□ -0.61
Usp28-201ENSMUST00000047349 Arhgef1Q61210 920 aaKnown RBP11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Nrxn3Q6P9K9 1571 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Prune1Q8BIW1 454 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 SlkO54988 1233 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Ddx11Q6AXC6 880 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Slain2Q8CI08 581 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Ipo4Q8VI75 1082 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Adcy9P51830 1353 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Rad50P70388 1312 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 EvcP57680 1005 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Atf3Q60765 181 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Ccdc7Q9D541 371 aa11.24□□□□□ -0.61
Usp28-201ENSMUST00000047349 Gm21698A0A087WQP8 267 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Gm45015A0A140LII9 184 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Gm18336A0A140LIU8 765 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Gm21671G3UY31 267 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Utp18Q5SSI6 552 aaKnown RBP11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Unc5clQ6R653 518 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Top1mtQ8R4U6 593 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Pmfbp1Q9WVQ0 1022 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 ThemisQ8BGW0 636 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Pdcl3Q8BVF2 240 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Brf1Q8CFK2 676 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Abcc4E9Q236 1325 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Evi5lH3BKQ3 813 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Il4rP16382 810 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 SympkQ80X82 1284 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Rhot2Q8JZN7 620 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Dmrtc1Q9D9R7 182 aa11.23□□□□□ -0.61
Usp28-201ENSMUST00000047349 Ppfia1B2RXQ2 1266 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Bcl2l13P59017 434 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 CalcaP70160 136 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 MlecQ6ZQI3 291 aaKnown RBP11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Dixdc1Q80Y83 711 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 4930572O03RikQ8C5Y0 211 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 OptnQ8K3K8 584 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Pdzd9Q9D9M4 266 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Grm8P47743 908 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Map3k13Q1HKZ5 959 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Stk3Q9JI10 497 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Brpf1B2RRD7 1212 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Vsig10D3YX43 558 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Kif4P33174 1231 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Tlr7P58681 1050 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Plcd4Q8K3R3 807 aa11.22□□□□□ -0.61
Usp28-201ENSMUST00000047349 Pdzrn3Q69ZS0 1063 aa11.21□□□□□ -0.61
Usp28-201ENSMUST00000047349 Card10P58660 1021 aa11.21□□□□□ -0.61
Usp28-201ENSMUST00000047349 Ddrgk1Q80WW9 315 aa11.21□□□□□ -0.61
Usp28-201ENSMUST00000047349 Phkg2Q9DB30 406 aa11.21□□□□□ -0.61
Usp28-201ENSMUST00000047349 CrklP47941 303 aa11.21□□□□□ -0.62
Usp28-201ENSMUST00000047349 Sf3a1Q8K4Z5 791 aaKnown RBP11.21□□□□□ -0.62
Usp28-201ENSMUST00000047349 Gli3Q61602 1583 aa11.21□□□□□ -0.62
Usp28-201ENSMUST00000047349 Col15a1O35206 1367 aa11.21□□□□□ -0.62
Usp28-201ENSMUST00000047349 Ms4a2P20490 235 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Zranb3Q6NZP1 1069 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Gdpd2Q9ESM6 539 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Plekhd1B2RPU2 505 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Gripap1Q8VD04 806 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Nphp3Q7TNH6 1325 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Mybbp1aQ7TPV4 1344 aaKnown RBP11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Gjb2Q00977 226 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 PogkQ80TC5 607 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Ccdc155Q80VJ8 648 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Zbtb3Q91X45 518 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Bicc1Q99MQ1 977 aaKnown RBP11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 1700006A11RikB9EHI3 544 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Tshz3Q8CGV9 1081 aa11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Eif3bQ8JZQ9 803 aaKnown RBP11.2□□□□□ -0.62
Usp28-201ENSMUST00000047349 Wnk3Q80XP9 1757 aa11.19□□□□□ -0.62
Usp28-201ENSMUST00000047349 Cnnm1Q0GA42 951 aa11.19□□□□□ -0.62
Usp28-201ENSMUST00000047349 Iqsec3Q3TES0 1195 aa11.19□□□□□ -0.62
Usp28-201ENSMUST00000047349 4931400O07RikQ9D4M5 137 aa11.19□□□□□ -0.62
Usp28-201ENSMUST00000047349 Zdhhc9P59268 364 aa11.19□□□□□ -0.62
Usp28-201ENSMUST00000047349 GnpatP98192 678 aa11.19□□□□□ -0.62
Usp28-201ENSMUST00000047349 PhaxQ9JJT9 385 aaKnown RBP11.19□□□□□ -0.62
Usp28-201ENSMUST00000047349 HdgfP51859 237 aaKnown RBP11.19□□□□□ -0.62
Usp28-201ENSMUST00000047349 Rnf20Q5DTM8 973 aa11.19□□□□□ -0.62
Usp28-201ENSMUST00000047349 Tgfb1i1Q62219 461 aa11.18□□□□□ -0.62
Usp28-201ENSMUST00000047349 Rrp12Q6P5B0 1295 aaKnown RBP11.18□□□□□ -0.62
Usp28-201ENSMUST00000047349 Taf5lQ91WQ5 589 aa11.18□□□□□ -0.62
Usp28-201ENSMUST00000047349 Smc3Q9CW03 1217 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms