RNA–Protein interactions for RNA: ENSMUST00000033540.5

Vbp1-201, Transcript of Prefoldin subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vbp1, Length 1,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1-201ENSMUST00000033540 Cyp2d11P24457 504 aa13.29□□□□□ -0.28
Vbp1-201ENSMUST00000033540 GalcP54818 684 aa13.29□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Aplp1Q03157 653 aa13.29□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Trim52Q8CDV4 233 aa13.29□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Calr4Q3TQS0 420 aa13.28□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Gm12185Q5NCB2 835 aa13.28□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Maco1Q7TQE6 664 aaKnown RBP13.28□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Ppp1r3fQ9JIG4 799 aa13.28□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Lama4P97927 1816 aa13.28□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Rangap1P46061 589 aaKnown RBP13.28□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Slc39a6Q8C145 765 aa13.28□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Sugp2Q8CH09 1067 aa13.28□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Syde2E9PUP1 1314 aa13.27□□□□□ -0.28
Vbp1-201ENSMUST00000033540 Adamtsl1Q8BLI0 1745 aa13.27□□□□□ -0.28
Vbp1-201ENSMUST00000033540 AampJ3QN89 436 aa13.27□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Igfbp6P47880 238 aa13.27□□□□□ -0.29
Vbp1-201ENSMUST00000033540 DiexfQ8BTT6 772 aaKnown RBP13.27□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Znf330Q922H9 316 aa13.27□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Ank1Q02357 1862 aa13.26□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Irf9Q61179 399 aa13.26□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Gigyf1Q99MR1 1044 aaKnown RBP13.26□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Ankrd44B2RXR6 993 aa13.25□□□□□ -0.29
Vbp1-201ENSMUST00000033540 NeflP08551 543 aa13.25□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Vars2Q3U2A8 1060 aa13.25□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Ankle2Q6P1H6 964 aa13.25□□□□□ -0.29
Vbp1-201ENSMUST00000033540 MvpQ9EQK5 861 aa13.25□□□□□ -0.29
Vbp1-201ENSMUST00000033540 CoblQ5NBX1 1337 aaKnown RBP13.25□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Hmgb2P30681 210 aaKnown RBP13.24□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Ttll7A4Q9F0 912 aa13.24□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Tspyl2Q7TQI8 677 aa13.24□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Nutm1Q8BHP2 1126 aa13.24□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Aldh1l2Q8K009 923 aa13.24□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Arap2Q8BZ05 1703 aa13.24□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Clcn1Q64347 994 aa13.23□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Zbtb1Q91VL9 713 aa13.23□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Prkrip1Q9CWV6 186 aaKnown RBP13.23□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Nip7Q9CXK8 180 aaKnown RBP13.23□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Ubap1lG3UW59 384 aa13.22□□□□□ -0.29
Vbp1-201ENSMUST00000033540 HellsQ60848 821 aa13.22□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Ppm1mQ8BU27 406 aa13.22□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Chmp4bQ9D8B3 224 aaKnown RBP13.22□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Hs6st3Q9QYK4 470 aa13.22□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Ubr3Q5U430 1889 aa13.22□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Bicdl1A0JNT9 577 aa13.21□□□□□ -0.29
Vbp1-201ENSMUST00000033540 MpndQ3TV65 487 aa13.21□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Map3k2Q61083 619 aa13.21□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Kdm2bQ6P1G2 1309 aa13.21□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Bend3Q6PAL0 825 aa13.21□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Zbtb40Q6PCS8 1258 aa13.21□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Miga2Q8BK03 593 aa13.21□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Snapc4Q8BP86 1333 aa13.21□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Bicc1Q99MQ1 977 aaKnown RBP13.21□□□□□ -0.29
Vbp1-201ENSMUST00000033540 Zfyve9A2A8R0 1397 aa13.2□□□□□ -0.3
Vbp1-201ENSMUST00000033540 MypnQ5DTJ9 1315 aa13.2□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Duxf3A0A0N4SV92 674 aa13.2□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Smarcc1P97496 1104 aa13.2□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Gnl3lQ6PGG6 577 aaKnown RBP13.2□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Mrc1Q61830 1456 aa13.19□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Gm13023A2A8N2 498 aa13.19□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Ccdc6D3YZP9 469 aa13.19□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Pim2Q62070 370 aa13.19□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Ankrd31A0A140LI88 1765 aa13.18□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Ssc5dQ8BV57 1371 aa13.18□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Prr5lA2AVJ5 370 aa13.18□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Exoc6bA6H5Z3 810 aa13.18□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Kcnh8P59111 1102 aa13.18□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Ankrd13dQ6PD24 605 aa13.18□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Plch1Q4KWH5 1682 aa13.17□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Lrrc43Q3V0L5 667 aa13.17□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Mphosph10Q810V0 681 aaKnown RBP13.17□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Rapgef4Q9EQZ6 1011 aa13.17□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Rgs17Q9QZB0 210 aa13.17□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Eif3aP23116 1344 aaKnown RBP13.16□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Stk36Q69ZM6 1316 aa13.16□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Hspa2P17156 633 aa13.16□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Zap70P43404 618 aa13.16□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Ddx58Q6Q899 926 aa13.16□□□□□ -0.3
Vbp1-201ENSMUST00000033540 AbraQ8BUZ1 375 aa13.16□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Dpf1Q9QX66 387 aa13.16□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Col11a2Q64739 1736 aa13.16□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Apba2P98084 750 aa13.15□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Q8BT18 775 aa13.15□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Greb1lB9EJV3 1913 aa13.15□□□□□ -0.3
Vbp1-201ENSMUST00000033540 AK157302I3ITR1 129 aa13.15□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Isca1Q9D924 129 aa13.15□□□□□ -0.3
Vbp1-201ENSMUST00000033540 Cfdp1O88271 295 aaKnown RBP13.14□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Fkbp1aP26883 108 aaKnown RBP13.14□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Kank3Q9Z1P7 791 aa13.14□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Spata31d1bE9QA57 1361 aa13.14□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Prkar2bP31324 416 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Tm6sf1P58749 370 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Csrnp3P59055 597 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Fkbp5Q64378 456 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Esco1Q69Z69 843 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Ripor2Q80U16 1078 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Slfnl1Q8BHW9 410 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Nlrp3Q8R4B8 1033 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Ltb4r2Q9JJL9 360 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Myh1Q5SX40 1942 aa13.13□□□□□ -0.31
Vbp1-201ENSMUST00000033540 Gnai2P08752 355 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms